Experiments

Searchable full-text extractions: founding hypothesis, core claims, experimental setups, key results and statistics — pulled out of each paper as structure. Search a cell line, an assay or an entity (e.g. HUH7) and find every paper that worked with it. This corpus stands on its own: most entries carry no reproduction assessment (yet).

• Systems biology and the host response to viral infection.

  PMID 18066032 · PMC7097743 · Nature biotechnology · 2007 · 8 claims · 8 setups

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  Systems biology integration of 'omics data (transcriptomics, proteomics, genomics) with computational modeling is needed to fully understand virus-host interactions and identify novel antiviral targets

  lung cd4 rhesus kshv microarray quantitative genomic

• A metrological foundation for absolute transcriptomics using International System of Units-anchored calibrators.

  PMID 41888124 · PMC13022412 · Nature communications · 2026 · 8 claims · 5 setups

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  TranScale is a set of 100 biomimetic RNA spike-in standards with SI-traceable certified copy-number concentrations (via isotope dilution mass spectrometry) that anchor RNA-seq measurements to an absolute scale.

  transcale biological isotope rt-dpcr bulk

• Determination of glycosylation sites and site-specific heterogeneity in glycoproteins.

  PMID 19700364 · PMC2749913 · Current opinion in chemical biology · 2009 · 8 claims · 8 setups

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  Mass spectrometry has emerged as the premier tool for structural determination of oligosaccharides/glycans and glycopeptides

  glycoproteins n-linked serum complex maldi tryptic nonspecific

• Chemically guided single-cell transcriptomics reveals sulfotransferase-mediated scaffold remodeling in securinine biosynthesis.

  PMID 41577683 · PMC12929733 · Nature communications · 2026 · 8 claims · 8 setups

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  FsMS is a ketoreductase that reduces premenisdaurilide to menisdaurilide

  suffruticosa synthetic nicotiana pacbio single-cell d2o

• Reconstruction of the lifeways of Central European Late Bronze Age communities using ancient DNA, isotope and osteoarchaeological analyses.

  PMID 41735297 · PMC12932679 · Nature communications · 2026 · 7 claims · 8 setups

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  Late Bronze Age individuals from Central Germany (Kuckenburg/Esperstedt) show genetic continuity with the preceding Early Bronze Age Únětice population.

  skeletal ancient newly shotgun principal admixture

• Glycomic analysis: an array of technologies.

  PMID 19728746 · PMC3443568 · ACS chemical biology · 2009 · 8 claims · 8 setups

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  Glycosylation is the most prevalent protein post-translational modification, occurring on at least 50% of all proteins

  sera t-cells serum glycoproteins lectin hydrazide bioorthogonal