Experiments

Searchable full-text extractions: founding hypothesis, core claims, experimental setups, key results and statistics — pulled out of each paper as structure. Search a cell line, an assay or an entity (e.g. HUH7) and find every paper that worked with it. This corpus stands on its own: most entries carry no reproduction assessment (yet).

• The genome sequence of the Acorn Weevil, Curculio glandium (T.Marsham, 1802) (Coleoptera: Curculionidae).

  PMID 42021765 · PMC13096787 · Wellcome open research · 2026 · 8 claims · 8 setups

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  A chromosomally complete genome assembly was produced for Curculio glandium (Acorn Weevil) as part of the Darwin Tree of Life project

  curculio assembled alternate pacbio hi-c sequencing

• The genome sequence of the Portuguese Dappled White, Euchloe tagis (Hübner, 1804) (Lepidoptera: Pieridae).

  PMID 42028159 · PMC13100615 · Wellcome open research · 2026 · 7 claims · 8 setups

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  A chromosome-level genome assembly was generated for Euchloe tagis (Portuguese Dappled White) as part of Project Psyche

  euchloe pacbio hi-c k-mer

• The genome sequence of the Northern Grizzled Skipper, Pyrgus centaureae (Rambur, 1839) (Lepidoptera: Hesperiidae).

  PMID 42038589 · PMC13109703 · Wellcome open research · 2026 · 8 claims · 8 setups

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  A chromosome-level genome assembly was produced for Pyrgus centaureae (Northern Grizzled Skipper) as part of Project Psyche.

  pyrgus pacbio hi-c rna-seq

• The genome sequence of a greenbottle fly, Lucilia caesar (Linnaeus, 1758) (Diptera: Calliphoridae).

  PMID 42064354 · PMC13125994 · Wellcome open research · 2026 · 8 claims · 8 setups

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  A chromosomally complete genome assembly was generated for a male Lucilia caesar specimen, with total length 615.55 Mb

  organism head abdomen dissected pacbio hi-c sequencing

• The genome sequence of the Atlantic white-sided dolphin, Leucopleurus acutus (Gray, 1828) (Artiodactyla: Delphinidae).

  PMID 42116831 · PMC13157609 · Wellcome open research · 2026 · 8 claims · 7 setups

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  A chromosomal-level genome assembly was produced for Leucopleurus acutus (Atlantic white-sided dolphin) as part of the Darwin Tree of Life project

  leucopleurus pacbio hi-c rna-seq

• The chromosomal genome sequence of the moon jellyfish, Aurelia sp. 4 Dawson et al. 2005 (Semaeostomeae: Ulmaridae) and its associated microbial metagenome sequences.

  PMID 42116832 · PMC13157608 · Wellcome open research · 2026 · 7 claims · 8 setups

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  Aurelia sp. 4 chromosomal genome assembly has a total length of 462.10 Mb with 99.99% of sequence scaffolded into 21 chromosomal pseudomolecules

  aurelia microbial pacbio hi-c rna-seq

• The genome sequence of the Red-necked Footman, Atolmis rubricollis (Linnaeus, 1758) (Lepidoptera: Erebidae).

  PMID 42148442 · PMC13173283 · Wellcome open research · 2026 · 7 claims · 8 setups

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  A chromosome-level genome assembly was generated for a female Atolmis rubricollis (Red-necked Footman) specimen as part of the Darwin Tree of Life project.

  atolmis barcoding pacbio hi-c

• The genome sequence of the Neglected Rustic moth, Xestia castanea (Esper, 1798) (Lepidoptera: Noctuidae).

  PMID 42148443 · PMC13179489 · Wellcome open research · 2026 · 8 claims · 8 setups

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  A genome assembly was generated for a female Xestia castanea individual comprising two haplotypes of 721.78 Mb and 685.53 Mb

  xestia pacbio assembled hi-c barcoding pacbio hi-c

• The genome sequence of Schreibers's Long-fingered Bat, Miniopterus schreibersii (Kuhl, 1817) (Chiroptera: Miniopteridae).

  PMID 42180417 · PMC13197751 · Wellcome open research · 2026 · 8 claims · 7 setups

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  A chromosome-level genome assembly was produced for Miniopterus schreibersii from a single male individual, comprising two phased haplotypes.

  miniopterus assembled pacbio hi-c rna-seq

• The genome sequence of the barkfly, Loensia variegata (Latreille, 1799) (Psocodea: Psocidae).

  PMID 42222608 · PMC13219991 · Wellcome open research · 2026 · 8 claims · 6 setups

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  A chromosome-level genome assembly was generated for Loensia variegata (barkfly) as part of the Darwin Tree of Life project

  loensia assembled pacbio hi-c barcoding

• The genome sequence of Geoffroy's Bat, Myotis emarginatus (Geoffroy, 1806) (Chiroptera: Vespertilionidae).

  PMID 42238844 · PMC13227098 · Wellcome open research · 2026 · 8 claims · 7 setups

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  A chromosome-level genome assembly was generated for Myotis emarginatus (Geoffroy's Bat) as part of the Darwin Tree of Life Project

  myotis pacbio hi-c rna-seq

• The genome sequence of the flat clown beetle, Hololepta plana (Sulzer, 1776) (Coleoptera: Histeridae).

  PMID 42255359 · PMC13237540 · Wellcome open research · 2026 · 8 claims · 8 setups

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  A chromosome-level genome assembly was produced for Hololepta plana (icHolPlan1) using the Darwin Tree of Life pipeline

  hololepta head abdomen hifi barcoding pacbio hi-c

• The genome sequence of a muscid fly, Phaonia angelicae (Scopoli, 1763) (Diptera: Muscidae).

  PMID 42255360 · PMC13234548 · Wellcome open research · 2026 · 8 claims · 8 setups

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  A chromosome-level genome assembly was generated for Phaonia angelicae, a muscid fly, as part of the Darwin Tree of Life project.

  phaonia pacbio hi-c k-mer

• The genome sequence of the Scarce Hook-tip, Sabra harpagula (Esper, 1786) (Lepidoptera: Drepanidae).

  PMID 42255361 · PMC13234554 · Wellcome open research · 2026 · 8 claims · 8 setups

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  The Sabra harpagula genome assembly has a total length of 377.24 Mb

  sabra pacbio hi-c sequencing

• The chromosomal genome sequence of the feather duster worm, Sabellastarte sp. h YS-2021 (Sabellida: Sabellidae) and its associated microbial metagenome sequences.

  PMID 42255362 · PMC13234546 · Wellcome open research · 2026 · 7 claims · 8 setups

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  A chromosomal-level genome assembly was generated for Sabellastarte sp. h YS-2021, with 97.94% of the sequence scaffolded into 14 chromosomal pseudomolecules

  sabellastarte microbial pacbio hi-c rna-seq

• The genome sequence of the Club-Horned Wood Borer Wasp, Trypoxylon clavicerum Lepeletier de Saint Fargeau & Audinet-Serville, 1828 (Hymenoptera: Crabronidae).

  PMID 42255363 · PMC13237539 · Wellcome open research · 2026 · 8 claims · 8 setups

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  A genome assembly was generated for an individual female Trypoxylon clavicerum (Club-Horned Wood Borer Wasp) as part of the Darwin Tree of Life project

  trypoxylon pacbio assembled barcoding high pacbio

• Highly contiguous chromosome-level assembly of the rock goby (Gobius paganellus) genome.

  PMID 41611730 · PMC12957465 · Scientific data · 2026 · 8 claims · 8 setups

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  Chromosome-level genome assembly of Gobius paganellus spans 813 Mb with >99.9% of sequence anchored to 23 pseudochromosomes

  liver eight pacbio soft-masked pacbio hi-c rna-seq

• Chromosome-level genome assembly of Siberian kale (Brassica napus subsp. pabularia).

  PMID 41760683 · PMC13066399 · Scientific data · 2026 · 8 claims · 8 setups

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  A chromosome-level genome assembly of Siberian kale variety Beta was generated using PacBio HiFi long reads, Illumina short reads, and Hi-C data

  beta illumina pacbio hi-c

• A high-quality chromosome-level genome assembly of the endangered species Magnolia amoena.

  PMID 41781393 · PMC13076695 · Scientific data · 2026 · 8 claims · 8 setups

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  Generated a high-quality chromosome-level genome assembly of the endangered/vulnerable species Magnolia amoena using DNBSEQ-T7, PacBio HiFi, and Hi-C data

  amoena pooled short-read pacbio hi-c

• Extensive variation between chromosomes of North American and European hop.

  PMID 42204144 · PMC13216280 · Nature communications · 2026 · 8 claims · 8 setups

  Has reproduction · 87

  Chromosome-scale, haplotype-resolved genome assemblies of the hybrid hop cultivar Apollo were generated using hifiasm, ALLHiC, and TRITEX pipelines with PacBio HiFi and Hi-C data

  hop feral biparental accessions pacbio busco fluorescence