Experiments

Searchable full-text extractions: founding hypothesis, core claims, experimental setups, key results and statistics — pulled out of each paper as structure. Search a cell line, an assay or an entity (e.g. HUH7) and find every paper that worked with it. This corpus stands on its own: most entries carry no reproduction assessment (yet).

• Mapping human pre-rRNA processing and modification at single nucleotide resolution using long read nanopore sequencing.

  PMID 41916977 · PMC13201660 · Nature communications · 2026 · 8 claims · 8 setups

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  NanoRibolyzer, a nanopore-based long-read cDNA sequencing approach, enables ab initio identification and quantification of pre-rRNA precursors while simultaneously mapping RNA modifications

  hek293 long-read density-gradient dapi

• Transcriptional readthrough precedes alternative splicing programs triggered in CML cells by imatinib.

  PMID 41860998 · PMC13004010 · Science advances · 2026 · 8 claims · 6 setups

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  Imatinib treatment induces transcriptional readthrough in K562 CML cells within 1 hour, before detectable gene expression or alternative splicing changes

  k562 imatinib-resistant long-read short-read rt-qpcr