Experiments

Searchable full-text extractions: founding hypothesis, core claims, experimental setups, key results and statistics — pulled out of each paper as structure. Search a cell line, an assay or an entity (e.g. HUH7) and find every paper that worked with it. This corpus stands on its own: most entries carry no reproduction assessment (yet).

• Dynamics of lung-infiltrating virus-specific T cells associated with age-dependent SARS-CoV-2 pneumonia severity.

  PMID 41533733 · PMC12829949 · PLoS pathogens · 2026 · 8 claims · 8 setups

  Full-text index only

  Aged Nr4a3-Tocky mice develop more severe pneumonia and delayed body weight recovery after SARS-CoV-2 infection than adult mice

  nr4a3-tocky bronchoalveolar lung left viral histopathology immunohistochemistry

• Metabolic quiescence of naive-like memory T cells precedes and maintains antigen-specific T cell memory.

  PMID 41735532 · PMC12956582 · Nature immunology · 2026 · 8 claims · 8 setups

  Full-text index only

  CD8+ T cells upregulate glycolysis to fuel anabolic needs for proliferation but predominantly use oxidative phosphorylation (OXPHOS) for energy production during the acute phase (days 7-28) after YFV vaccination

  peripheral cd8+ ns4b+ antigen-specific flow scrna-seq cite-seq

• PRECISE-seq reveals disease-relevant TCR repertoires with phenotypic plasticity.

  PMID 42118153 · PMC13165028 · The Journal of experimental medicine · 2026 · 8 claims · 8 setups

  Full-text index only

  PRECISE-seq is a contact-dependent proximity labeling sequencing platform using Sortase A (SrtA)-catalyzed ligation to simultaneously profile antigen specificity, TCR potency, and phenotypic landscape at single-cell resolution

  hek293t k562-hla-a2 ot-i cd45.1+ flow