Experiments
Searchable full-text extractions: founding hypothesis, core claims, experimental setups, key results and statistics — pulled out of each paper as structure. Search a cell line, an assay or an entity (e.g. HUH7) and find every paper that worked with it. This corpus stands on its own: most entries carry no reproduction assessment (yet).
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Separating selection from mutation in antibody language models.
PMID 41944291 · PMC13056363 · eLife · 2026 · 8 claims · 6 setups
Masked antibody language models such as AbLang2 are biased by nucleotide-level mutation processes (germline memorization, codon table, SHM rate variation)
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BLASTO: a tool for searching orthologous groups.
PMID 17483516 · PMC1933156 · Nucleic acids research · 2007 · 7 claims · 2 setups
BLASTO treats each orthologous group as a unit and outputs a ranked list of orthologous groups instead of single sequences
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Improved chromosome-level genome assembly of the American cockroach, Periplaneta americana.
PMID 41123565 · PMC12774602 · G3 (Bethesda, Md.) · 2026 · 8 claims · 7 setups
Produced the first chromosome-level genome assembly of P. americana, scaffolded into 17 chromosome-scale scaffolds consistent with karyotype
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Has reproduction · 88
Wochenende - modular and flexible alignment-based shotgun metagenome analysis.
PMID 36368923 · PMC9650795 · BMC genomics · 2022 · 8 claims · 6 setups
Wochenende is a modular, transparent alignment-based pipeline for shotgun metagenome analysis supporting short and long reads across all kingdoms of life
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Accessing medically relevant complex regions with a pangenome graph of 20 near-complete Japanese haplotypes.
PMID 42203797 · PMC13216315 · Nature communications · 2026 · 8 claims · 8 setups
Generated 20 near-complete haplotypes from 10 Japanese male individuals using PacBio HiFi, ONT ultra-long, and Omni-C reads, all with contig N50 exceeding 100 Mbp