Experiments

Searchable full-text extractions: founding hypothesis, core claims, experimental setups, key results and statistics — pulled out of each paper as structure. Search a cell line, an assay or an entity (e.g. HUH7) and find every paper that worked with it. This corpus stands on its own: most entries carry no reproduction assessment (yet).

• Phosphorylation of SF3B1 by CDK11 orchestrates spliceosome activation via SNIP1-dependent RES complex recruitment.

  PMID 41904131 · PMC13194972 · Nature communications · 2026 · 8 claims · 7 setups

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  CDK11 inhibitor OTS964 traps the spliceosome in a previously uncharacterized intermediate (B_OTS964) that has the NTR complex integrated but the NTC complex not yet associated.

  hct116 gst-sf3b1 ip-mass subcellular iclip-seq

• Automated mapping of DNA replication fork progression in human cells with ForkML.

  PMID 41577668 · PMC12932727 · Nature communications · 2026 · 8 claims · 8 setups

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  ForkML uses double BrdU pulse-labelling and nanopore sequencing with a machine-learning fork detection/orientation pipeline to automatically map thousands of individual replication fork velocities.

  hct116 hela bj-htert cerevisiae nanopore gloe-seq mass