Experiments
Searchable full-text extractions: founding hypothesis, core claims, experimental setups, key results and statistics — pulled out of each paper as structure. Search a cell line, an assay or an entity (e.g. HUH7) and find every paper that worked with it. This corpus stands on its own: most entries carry no reproduction assessment (yet).
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A cellular epigenetic classification system for glioblastoma.
PMID 41499453 · PMC13128495 · Neuro-oncology · 2026 · 8 claims · 8 setups
ITHresolveGBM, a hierarchical two-step NMF method, deconvolutes bulk GBM DNA methylation profiles into three non-malignant (immune, glial, neuronal) and three malignant components
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UBD: incorporating uncertainty in cell type proportion estimates from bulk samples to infer cell-type-specific profiles.
PMID 41520227 · PMC12895075 · Briefings in bioinformatics · 2026 · 7 claims · 4 setups
Existing CTS deconvolution methods (e.g., CIBERSORTx, TCA, bMIND, CellDMC, HBI) require cell type proportions that are in practice only estimated, not known, introducing unaccounted uncertainty into CTS inference.
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DNA methylation profiles at hospital admission are associated with subsequent severe COVID-19 outcomes.
PMID 42021404 · PMC13251264 · Clinical epigenetics · 2026 · 7 claims · 5 setups
DNA methylation profiles at hospital admission differ among disease trajectory groups (TGs) and are associated with subsequent disease progression.
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Has reproduction · 93
5-methylcytosine RNA modification regulators-based patterns and features of immune microenvironment in acute myeloid leukemia.
PMID 38277218 · PMC10911375 · Aging · 2024 · 8 claims · 8 setups
m5C regulators are differentially expressed between AML and normal samples and correlate with AML prognosis