Experiments

Searchable full-text extractions: founding hypothesis, core claims, experimental setups, key results and statistics — pulled out of each paper as structure. Search a cell line, an assay or an entity (e.g. HUH7) and find every paper that worked with it. This corpus stands on its own: most entries carry no reproduction assessment (yet).

• An Improved Chromosome-Level Genome Assembly and Comprehensive Annotation of the Model Ascidian Ciona savignyi.

  PMID 41792167 · PMC13087180 · Scientific data · 2026 · 8 claims · 8 setups

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  An improved chromosome-level genome assembly of C. savignyi was generated using Illumina short reads, ONT long reads, and Hi-C data.

  savignyi illumina oxford hi-c

• Haplotype-resolved and near telomere-to-telomere assembly of the autotetraploid potato genome.

  PMID 41634861 · PMC12955163 · Genome biology · 2026 · 8 claims · 8 setups

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  PHap is a new pipeline that enables haplotype-resolved, near-T2T assembly of autopolyploid genomes using only standard HiFi, ONT-UL, and Hi-C sequencing data

  autotetraploid parental huashu4 pacbio hi-c illumina

• A telomere-to-telomere reference genome assembly of the Hypomesus nipponensis.

  PMID 41888540 · PMC13187195 · Scientific data · 2026 · 8 claims · 8 setups

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  A gap-free T2T genome assembly (HNIP-T2T) of H. nipponensis was generated, spanning 526.31 Mb with contig N50 of 20.23 Mb, anchored to 28 pseudochromosomes with zero gaps

  nipponensis hnip-t2t whole-genome pacbio ont