Experiments
Searchable full-text extractions: founding hypothesis, core claims, experimental setups, key results and statistics — pulled out of each paper as structure. Search a cell line, an assay or an entity (e.g. HUH7) and find every paper that worked with it. This corpus stands on its own: most entries carry no reproduction assessment (yet).
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FEDRANN: effective long-read overlap detection based on dimensionality reduction and approximate nearest neighbors.
PMID 42102720 · PMC13201080 · GigaScience · 2026 · 8 claims · 6 setups
A pipeline combining IDF transformation, sparse random projection (SRP), and NNDescent (the FEDRANN strategy) enables accurate overlap detection across diverse long-read datasets
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Has reproduction · 69
Meta-analysis of six dairy cattle breeds reveals biologically relevant candidate genes for mastitis resistance.
PMID 39009986 · PMC11247842 · Genetics, selection, evolution : GSE · 2024 · 5 claims · 8 setups
Meta-analysis of GWAS across six dairy cattle breeds identifies 58 lead markers associated with clinical mastitis and somatic cell score
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The use of edge-betweenness clustering to investigate biological function in protein interaction networks.
PMID 15740614 · PMC555937 · BMC bioinformatics · 2005 · 8 claims · 7 setups
Edge-Betweenness clustering separates protein interaction graphs into subgraphs whose GO term distributions show significant correlations, revealing biologically meaningful functional modules.
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umite: fast quantification of Smart-seq3 libraries with improved UMI retrieval.
PMID 41692984 · PMC12989134 · Bioinformatics (Oxford, England) · 2026 · 8 claims · 6 setups
umite offers efficient mismatch-tolerant (fuzzy) UMI detection that boosts UMI retrieval by 5%-15% compared to standard position-based matching