Experiments

Searchable full-text extractions: founding hypothesis, core claims, experimental setups, key results and statistics — pulled out of each paper as structure. Search a cell line, an assay or an entity (e.g. HUH7) and find every paper that worked with it. This corpus stands on its own: most entries carry no reproduction assessment (yet).

• eVITTA: a web-based visualization and inference toolbox for transcriptome analysis.

  PMID 34019643 · PMC8218201 · Nucleic acids research · 2021 · 8 claims · 7 setups

  Has reproduction · 82

  eVITTA is a web-based toolbox with three integrated modules (easyGEO, easyGSEA, easyVizR) for GEO data access, functional profiling, and multi-dataset comparison

  nasopharyngeal elegans bulk pre-ranked microarray

• Identification of Radiation-Induced Injury Pathways and Hub Genes from RNA-Seq Data Based on Integrative Bioinformatics Approach.

  PMID 42074497 · PMC13116960 · Genes · 2026 · 8 claims · 6 setups

  Full-text index only

  Ionizing radiation induces extensive transcriptome reprogramming in mouse bone marrow HSCs 3 days after whole-body irradiation.

  bone deg transcriptome deg-encoded rna-seq gene kegg