Experiments

Searchable full-text extractions: founding hypothesis, core claims, experimental setups, key results and statistics — pulled out of each paper as structure. Search a cell line, an assay or an entity (e.g. HUH7) and find every paper that worked with it. This corpus stands on its own: most entries carry no reproduction assessment (yet).

• Unraveling the role of bacteria with heritable versus non-heritable relative abundance in the gut on boar semen quality.

  PMID 41199168 · PMC12590650 · Genetics, selection, evolution : GSE · 2025 · 6 claims · 7 setups

  Has reproduction · 61

  39 heritable and 91 non-heritable bacterial genera were identified in the boar gut based on heritability of relative abundance

  fecal blood boar gut 16s snp gas

• Different Intestinal Microbiota with Growth Stages of Three-Breed Hybrid Pig.

  PMID 35978648 · PMC9377885 · BioMed research international · 2022 · 7 claims · 5 setups

  Has reproduction · 75

  The composition and relative abundance of intestinal microbiota in three-breed hybrid pigs differ significantly across growth stages (60, 120, 180 days)

  fecal same 16s otu alpha

• Seasonal Dynamics Are the Major Driver of Microbial Diversity and Composition in Intensive Freshwater Aquaculture.

  PMID 34248892 · PMC8264503 · Frontiers in microbiology · 2021 · 7 claims · 6 setups

  Full-text index only

  Natural seasonality is the primary driver of aquatic bacterial community structure in the fishponds and reservoir

  pond filtered phytoplankton common 16s photosynthetic inorganic

• Taxonomic description of cyanobacteria from extreme habitats through genome-based classification.

  PMID 42131214 · PMC13161053 · Frontiers in microbiology · 2026 · 8 claims · 7 setups

  Full-text index only

  Cyanobacteria dominate the microbial communities of Hawaiian steam vent habitats, with community composition varying by microhabitat

  environmental steam assembled cyanobacterial 16s metagenome genome

• Standing on the shoulders of microbes: microbiome thermal priming buffers the effects of heatwaves on clams by preventing stress overreaction.

  PMID 41987828 · PMC13077298 · ISME communications · 2026 · 8 claims · 5 setups

  Full-text index only

  Transplantation of a microbiome from heat-primed donor clams into non-acclimated recipients is sufficient to enhance host resilience during a subsequent simulated heatwave.

  ruditapes philippinarum 16s host enzymatic

• Correlations between gut microbiota and serum metabolomics in patients with neurogenic rosacea.

  PMID 40676500 · PMC12272963 · BMC microbiology · 2025 · 6 claims · 3 setups

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  Patients with neurogenic rosacea exhibit significant gut microbiota dysbiosis compared to healthy controls

  serum fecal paired lc-ms 16s spearman

• The archives are half-empty: an assessment of the availability of microbial community sequencing data.

  PMID 32859925 · PMC7455719 · Communications biology · 2020 · 8 claims · 6 setups

  Has reproduction · 95

  A large proportion of 16S rRNA amplicon sequencing studies contain data that is not available or not reusable despite being reported as deposited.

  publications randomly studies v3–v4 literature manual database

• The effect of 16S rRNA region choice on bacterial community metabarcoding results.

  PMID 30720800 · PMC6362892 · Scientific data · 2019 · 8 claims · 8 setups

  Has reproduction · 59

  The V2-V3 16S rRNA fragment has higher resolution for lower-rank taxa (genera and species) than V3-V4, enabling more precise distance-based OTU clustering.

  bacterial extracted filtered combined 16s pcr extraction