Experiments

Searchable full-text extractions: founding hypothesis, core claims, experimental setups, key results and statistics — pulled out of each paper as structure. Search a cell line, an assay or an entity (e.g. HUH7) and find every paper that worked with it. This corpus stands on its own: most entries carry no reproduction assessment (yet).

Publications 1.3k Datasets 392.5k Experiments 2.2k

Assay: sequencing ✕ Clear

The genome sequence of the Sage Skipper, Muschampia proto (Ochsenheimer, 1808) (Lepidoptera: Hesperiidae).

PMID 41938270 · PMC13049433 · Wellcome open research · 2026 · 8 claims · 8 setups

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A chromosome-level genome assembly was produced for Muschampia proto, with 99.67% of haplotype 1 scaffolded into 30 chromosomal pseudomolecules including the Z sex chromosome.

organism pacbio hifi assembled pacbio hi-c k-mer
The genome sequence of a window fly, Scenopinus jerei Pohjoismäki & Haarto, 2021 (Diptera: Scenopinidae).

PMID 41953045 · PMC13054250 · Wellcome open research · 2026 · 8 claims · 8 setups

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This assembly provides the first genomic resource for the family Scenopinidae (window flies)

organism idscejere3 assembled pacbio hi-c rna-seq
The genome sequence of the chocolate mining bee, Andrena scotica Perkins, 1916 (Hymenoptera: Andrenidae).

PMID 41960580 · PMC13058575 · Wellcome open research · 2026 · 7 claims · 8 setups

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A haploid chromosome-level genome assembly was generated for a male Andrena scotica (chocolate mining bee) specimen.

andrena pacbio hi-c rna-seq
The genome sequence of a hoverfly , Melangyna compositarum (Verrall, 1873) (Diptera: Syrphidae).

PMID 41971599 · PMC13069379 · Wellcome open research · 2026 · 7 claims · 8 setups

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A genome assembly was generated for a single male Melangyna compositarum hoverfly specimen (idMelComo1) as part of the Darwin Tree of Life project.

melangyna barcoding high pacbio
The genome sequence of the Portuguese Dappled White, Euchloe tagis (Hübner, 1804) (Lepidoptera: Pieridae).

PMID 42028159 · PMC13100615 · Wellcome open research · 2026 · 7 claims · 8 setups

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A chromosome-level genome assembly was generated for Euchloe tagis (Portuguese Dappled White) as part of Project Psyche

euchloe pacbio hi-c k-mer
The genome sequence of the Northern Grizzled Skipper, Pyrgus centaureae (Rambur, 1839) (Lepidoptera: Hesperiidae).

PMID 42038589 · PMC13109703 · Wellcome open research · 2026 · 8 claims · 8 setups

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A chromosome-level genome assembly was produced for Pyrgus centaureae (Northern Grizzled Skipper) as part of Project Psyche.

pyrgus pacbio hi-c rna-seq
The genome sequence of a greenbottle fly, Lucilia caesar (Linnaeus, 1758) (Diptera: Calliphoridae).

PMID 42064354 · PMC13125994 · Wellcome open research · 2026 · 8 claims · 8 setups

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A chromosomally complete genome assembly was generated for a male Lucilia caesar specimen, with total length 615.55 Mb

organism head abdomen dissected pacbio hi-c sequencing
The genome sequence of the Southern White Admiral, Limenitis reducta (Staudinger, 1901) (Lepidoptera: Nymphalidae).

PMID 42078575 · PMC13129534 · Wellcome open research · 2026 · 7 claims · 8 setups

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A chromosome-level genome assembly was generated for a female Limenitis reducta specimen, comprising two phased haplotypes.

reducta pacbio assembled haplotype pacbio hi-c k-mer
The genome sequence of the Woodland Grayling, Hipparchia fagi (Scopoli, 1763) (Lepidoptera: Nymphalidae).

PMID 42078576 · PMC13133624 · Wellcome open research · 2026 · 8 claims · 8 setups

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A chromosome-level, haplotype-resolved genome assembly was produced for Hipparchia fagi (Woodland Grayling) as part of Project Psyche.

organism pacbio computational assembled pacbio hi-c k-mer
The genome sequence of the nematode Ostertagia ostertagi (Stiles, 1892) (Rhabditida, Trichostrongylidae).

PMID 42094077 · PMC13139848 · Wellcome open research · 2026 · 8 claims · 7 setups

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A chromosome-level genome assembly was generated for a single male specimen of Ostertagia ostertagi (isolate MOo2).

single pooled unassembled assembled pacbio hi-c k-mer
The genome sequence of the Atlantic white-sided dolphin, Leucopleurus acutus (Gray, 1828) (Artiodactyla: Delphinidae).

PMID 42116831 · PMC13157609 · Wellcome open research · 2026 · 8 claims · 7 setups

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A chromosomal-level genome assembly was produced for Leucopleurus acutus (Atlantic white-sided dolphin) as part of the Darwin Tree of Life project

leucopleurus pacbio hi-c rna-seq
The genome sequence of the Clouded Buff, Diacrisia sannio (Linnaeus, 1758) (Lepidoptera: Erebidae).

PMID 42148439 · PMC13173286 · Wellcome open research · 2026 · 8 claims · 8 setups

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Chromosome-level genome assembly generated for Diacrisia sannio with two haplotypes of 722.98 Mb and 724.10 Mb

diacrisia pacbio hi-c k-mer
The genome sequence of Heligmosomum mixtum Schulz, 1929 (Rhabditida: Heligmosomidae).

PMID 42148441 · PMC13173282 · Wellcome open research · 2026 · 8 claims · 8 setups

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Genome assembly of Heligmosomum mixtum produced as two haplotypes, 741.91 Mb and 754.62 Mb in total length

heligmosomum hifi assembled scaffolded pacbio hi-c k-mer
Protocol for total RNA sequencing analysis of extracellular RNA from biofluids.

PMID 42149717 · PMC13213309 · STAR protocols · 2026 · 8 claims · 6 setups

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This protocol enables total RNA sequencing library preparation of extracellular RNA (exRNA) from blood plasma using SMART (Switching Mechanism At 5' end of RNA Template) cDNA synthesis technology, from plasma preparation through sequencing data analysis.

blood urine seminal conditioned sequencing qpcr-based
The genome sequence of the barkfly, Loensia variegata (Latreille, 1799) (Psocodea: Psocidae).

PMID 42222608 · PMC13219991 · Wellcome open research · 2026 · 8 claims · 6 setups

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A chromosome-level genome assembly was generated for Loensia variegata (barkfly) as part of the Darwin Tree of Life project

loensia assembled pacbio hi-c barcoding
The chromosomal genome sequence of the sponge, Rhopaloeides odorabile Thompson, Murphy, Bergquist & Evans, 1987 (Dictyoceratida: Spongiidae) and its associated microbial metagenome sequences.

PMID 42232316 · PMC13224822 · Wellcome open research · 2026 · 8 claims · 8 setups

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A chromosome-level genome assembly was produced for the sponge Rhopaloeides odorabile using the Tree of Life pipeline

rhopaloeides odorabile-associated odorabile recovered pacbio hi-c sequencing
The genome sequence of Geoffroy's Bat, Myotis emarginatus (Geoffroy, 1806) (Chiroptera: Vespertilionidae).

PMID 42238844 · PMC13227098 · Wellcome open research · 2026 · 8 claims · 7 setups

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A chromosome-level genome assembly was generated for Myotis emarginatus (Geoffroy's Bat) as part of the Darwin Tree of Life Project

myotis pacbio hi-c rna-seq
The genome sequence of a muscid fly, Phaonia angelicae (Scopoli, 1763) (Diptera: Muscidae).

PMID 42255360 · PMC13234548 · Wellcome open research · 2026 · 8 claims · 8 setups

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A chromosome-level genome assembly was generated for Phaonia angelicae, a muscid fly, as part of the Darwin Tree of Life project.

phaonia pacbio hi-c k-mer
The genome sequence of the Scarce Hook-tip, Sabra harpagula (Esper, 1786) (Lepidoptera: Drepanidae).

PMID 42255361 · PMC13234554 · Wellcome open research · 2026 · 8 claims · 8 setups

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The Sabra harpagula genome assembly has a total length of 377.24 Mb

sabra pacbio hi-c sequencing
The chromosomal genome sequence of the feather duster worm, Sabellastarte sp. h YS-2021 (Sabellida: Sabellidae) and its associated microbial metagenome sequences.

PMID 42255362 · PMC13234546 · Wellcome open research · 2026 · 7 claims · 8 setups

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A chromosomal-level genome assembly was generated for Sabellastarte sp. h YS-2021, with 97.94% of the sequence scaffolded into 14 chromosomal pseudomolecules

sabellastarte microbial pacbio hi-c rna-seq

Experiments

The genome sequence of the Sage Skipper, Muschampia proto (Ochsenheimer, 1808) (Lepidoptera: Hesperiidae).

The genome sequence of a window fly, Scenopinus jerei Pohjoismäki & Haarto, 2021 (Diptera: Scenopinidae).

The genome sequence of the chocolate mining bee, Andrena scotica Perkins, 1916 (Hymenoptera: Andrenidae).

The genome sequence of a hoverfly , Melangyna compositarum (Verrall, 1873) (Diptera: Syrphidae).

The genome sequence of the Portuguese Dappled White, Euchloe tagis (Hübner, 1804) (Lepidoptera: Pieridae).

The genome sequence of the Northern Grizzled Skipper, Pyrgus centaureae (Rambur, 1839) (Lepidoptera: Hesperiidae).

The genome sequence of a greenbottle fly, Lucilia caesar (Linnaeus, 1758) (Diptera: Calliphoridae).

The genome sequence of the Southern White Admiral, Limenitis reducta (Staudinger, 1901) (Lepidoptera: Nymphalidae).

The genome sequence of the Woodland Grayling, Hipparchia fagi (Scopoli, 1763) (Lepidoptera: Nymphalidae).

The genome sequence of the nematode Ostertagia ostertagi (Stiles, 1892) (Rhabditida, Trichostrongylidae).

The genome sequence of the Atlantic white-sided dolphin, Leucopleurus acutus (Gray, 1828) (Artiodactyla: Delphinidae).

The genome sequence of the Clouded Buff, Diacrisia sannio (Linnaeus, 1758) (Lepidoptera: Erebidae).

The genome sequence of Heligmosomum mixtum Schulz, 1929 (Rhabditida: Heligmosomidae).

Protocol for total RNA sequencing analysis of extracellular RNA from biofluids.

The genome sequence of the barkfly, Loensia variegata (Latreille, 1799) (Psocodea: Psocidae).

The chromosomal genome sequence of the sponge, Rhopaloeides odorabile Thompson, Murphy, Bergquist & Evans, 1987 (Dictyoceratida: Spongiidae) and its associated microbial metagenome sequences.

The genome sequence of Geoffroy's Bat, Myotis emarginatus (Geoffroy, 1806) (Chiroptera: Vespertilionidae).

The genome sequence of a muscid fly, Phaonia angelicae (Scopoli, 1763) (Diptera: Muscidae).

The genome sequence of the Scarce Hook-tip, Sabra harpagula (Esper, 1786) (Lepidoptera: Drepanidae).

The chromosomal genome sequence of the feather duster worm, Sabellastarte sp. h YS-2021 (Sabellida: Sabellidae) and its associated microbial metagenome sequences.