Experiments
Searchable full-text extractions: founding hypothesis, core claims, experimental setups, key results and statistics — pulled out of each paper as structure. Search a cell line, an assay or an entity (e.g. HUH7) and find every paper that worked with it. This corpus stands on its own: most entries carry no reproduction assessment (yet).
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Proteomics approaches to identify tumor antigen directed autoantibodies as cancer biomarkers.
PMID 15502247 · PMC3839398 · Disease markers · 2004 · 8 claims · 8 setups
Proteomics approaches (2D Western blot, protein microarray, multiplex ELISA) can identify tumor antigen-directed autoantibodies as candidate cancer biomarkers
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Automated mapping of DNA replication fork progression in human cells with ForkML.
PMID 41577668 · PMC12932727 · Nature communications · 2026 · 8 claims · 8 setups
ForkML uses double BrdU pulse-labelling and nanopore sequencing with a machine-learning fork detection/orientation pipeline to automatically map thousands of individual replication fork velocities.
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Substantial unannotated noncoding transcripts in tumors may transcriptionally regulate cancer-related genes.
PMID 41606598 · PMC12924361 · BMC biology · 2026 · 8 claims · 8 setups
Many unannotated genes and transcripts (MSTRG/UNTs) are pervasively generated and significantly differentially expressed in cancer cell lines and tissues across four tumor types (lung, liver, stomach, colon)
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ChromBERT: A foundation model for learning interpretable representations for context-specific transcriptional regulatory networks.
PMID 41592570 · PMC13069865 · Cell genomics · 2026 · 8 claims · 7 setups
ChromBERT is pre-trained via masked reconstruction on the Cistrome-Human-6K dataset (6,391 cistromes, 991 transcription regulators) to learn genome-wide interaction syntax of transcription regulators