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FEDRANN: effective long-read overlap detection based on dimensionality reduction and approximate nearest neighbors.
PMID 42102720 · PMC13201080 · GigaScience · 2026 · 8 claims · 6 setups
A pipeline combining IDF transformation, sparse random projection (SRP), and NNDescent (the FEDRANN strategy) enables accurate overlap detection across diverse long-read datasets