Experiments
Searchable full-text extractions: founding hypothesis, core claims, experimental setups, key results and statistics — pulled out of each paper as structure. Search a cell line, an assay or an entity (e.g. HUH7) and find every paper that worked with it. This corpus stands on its own: most entries carry no reproduction assessment (yet).
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Full-text index only
STARCall integrates image stitching, alignment, and read calling to enable scalable analysis of in situ sequencing data.
PMID 42044152 · PMC13160441 · PLoS computational biology · 2026 · 8 claims · 8 setups
STARCall combines image stitching and cross-cycle alignment into a single joint optimization step (via ConStitch) that minimizes both inter-cycle and intra-cycle alignment error.
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Full-text index only
Deciphering the RNA landscapes on mammalian cell surfaces.
PMID 40973153 · PMC12959771 · Protein & cell · 2026 · 7 claims · 8 setups
AMOUR, a T7 RNA polymerase-based in-situ linear amplification method, enables high-throughput profiling of outer membrane surface RNAs while preserving plasma membrane integrity, including in rare primary cell populations.
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Has reproduction · 71
Prospects of telomere-to-telomere assembly in barley: Analysis of sequence gaps in the MorexV3 reference genome.
PMID 35338551 · PMC9241371 · Plant biotechnology journal · 2022 · 7 claims · 8 setups
Almost all centromeric sequences and 45S ribosomal DNA repeat arrays are absent from the MorexV3 pseudomolecules
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Has reproduction · 71
A global change in RNA polymerase II pausing during the Drosophila midblastula transition.
PMID 23951546 · PMC3743134 · eLife · 2013 · 8 claims · 8 setups
Massive de novo recruitment of Pol II (and TBP) with widespread pausing occurs during the Drosophila midblastula transition, at 4007 promoters (~one third of all genes).