Experiments
Searchable full-text extractions: founding hypothesis, core claims, experimental setups, key results and statistics — pulled out of each paper as structure. Search a cell line, an assay or an entity (e.g. HUH7) and find every paper that worked with it. This corpus stands on its own: most entries carry no reproduction assessment (yet).
-
Has reproduction · 89
Spatial information matters: are traditional imputation methods effective for spatial transcriptomics data?
PMID 41627342 · PMC12862982 · Briefings in bioinformatics · 2026 · 7 claims · 3 setups
No single existing SOTA imputation method consistently performs well across newer SRT platforms/datasets
-
Full-text index only
Attention-based deep learning for analysis of pathology images and gene expression data in lung squamous premalignant lesions.
PMID 41952176 · PMC13188385 · Genome medicine · 2026 · 8 claims · 8 setups
A multimodal transformer combining WSIs and gene expression outperforms models trained on either modality alone for classifying bronchial dysplasia or worse vs non-dysplasia.
-
Has reproduction · 85
An integrated single-cell and spatial proteotranscriptomics atlas of fibroblast-driven immunoregulation within the human adult oral cavity.
PMID 42147490 · PMC13179517 · Cell press blue · 2026 · 8 claims · 8 setups
Fibroblasts act as central regulators of structural immunity in the human oral cavity, forming peri-epithelial hubs enriched in effector cytokines
-
Full-text index only
Directing stem cell differentiation by chromatin state approximation.
PMID 41734818 · PMC12956330 · Nucleic acids research · 2026 · 8 claims · 8 setups
Greedy selection of culture conditions by chromatin (ATAC-seq) distance to target is a viable optimisation strategy for differentiation protocols