Experiments

Searchable full-text extractions: founding hypothesis, core claims, experimental setups, key results and statistics — pulled out of each paper as structure. Search a cell line, an assay or an entity (e.g. HUH7) and find every paper that worked with it. This corpus stands on its own: most entries carry no reproduction assessment (yet).

• Energy, power, and infrastructure demands from electrifying airport ground support equipment at United States airports.

  PMID 41912553 · PMC13199391 · Nature communications · 2026 · 7 claims · 4 setups

  Has reproduction · 95

  A bottom-up, agent-based modeling framework can quantify site-specific energy demand, peak power, fleet/charger requirements, and costs for electrifying GSE at 317 U.S. airports

  major u.s egse agent-based flight per-task

• Genome-wide identification of Hfq-regulated small RNAs in the fire blight pathogen Erwinia amylovora discovered small RNAs with virulence regulatory function.

  PMID 24885615 · PMC4070566 · BMC genomics · 2014 · 8 claims · 8 setups

  Has reproduction · 50

  A total of 40 candidate Hfq-dependent sRNAs were identified genome-wide in E. amylovora by combining RNA-seq with a Rho-independent terminator search.

  erwinia intergenic candidate wounded small northern race

• Polyploidy-associated paramutation in Arabidopsis is determined by small RNAs, temperature, and allele structure.

  PMID 33690630 · PMC7978347 · PLoS genetics · 2021 · 8 claims · 4 setups

  Has reproduction · 97

  Active (R) and silent (S) epialleles are associated with distinct sRNA size classes: mainly 21 nt sRNAs at R and mostly 24 nt sRNAs at S, regardless of ploidy.

  day-old seedlings tetraploid arabidopsis small hygromycin crispr-cas9

• How to find soluble proteins: a comprehensive analysis of alpha/beta hydrolases for recombinant expression in E. coli.

  PMID 15804363 · PMC1079826 · BMC genomics · 2005 · 7 claims · 7 setups

  Full-text index only

  Predicted solubility in E. coli (via CV-CV') depends on hydrolase size, phylogenetic origin, homologous family, and superfamily

  lipase bacterial small genera cv-cv correlation grouped

• Empirical Bayes analysis of quantitative proteomics experiments.

  PMID 19829701 · PMC2759080 · PloS one · 2009 · 8 claims · 4 setups

  Full-text index only

  Developed a new empirical Bayes framework that models log2 SILAC protein ratios and is robust to non-Gaussian tails and data sparsity, unlike Gaussian mixture models or Efron's original spline-based approach

  hela predicted computational silac utr gaussian

• Guar gum and similar soluble fibers in the regulation of cholesterol metabolism: current understandings and future research priorities.

  PMID 19183750 · PMC2605338 · Vascular health and risk management · 2008 · 8 claims · 8 setups

  Full-text index only

  Soluble fiber consumption consistently reduces plasma total and LDL cholesterol in animal models and human clinical trials

  guinea rats type healthy plasma clinical meta-analysis