Experiments
Searchable full-text extractions: founding hypothesis, core claims, experimental setups, key results and statistics — pulled out of each paper as structure. Search a cell line, an assay or an entity (e.g. HUH7) and find every paper that worked with it. This corpus stands on its own: most entries carry no reproduction assessment (yet).
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Cross-modality representation and multi-sample integration of spatially resolved omics data.
PMID 42114120 · PMC13160428 · Briefings in bioinformatics · 2026 · 7 claims · 4 setups
PRESENT is a contrastive learning-based integrative framework for cross-modality representation of spatial multi-omics data using omics-specific encoders (GAT + BNN) and distribution-aware decoders (ZINB for RNA, ZIP for ATAC)
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Spatial transcriptomics unveils immune cellular ecosystems associated with patient survival in diffuse large B-cell lymphoma.
PMID 42010788 · PMC13102037 · Oncoimmunology · 2026 · 7 claims · 7 setups
DLBCL tissues are organized into six recurrent, spatially defined cellular ecosystems (Cell-Eco) with distinct immune compositions, transcriptional programs, and neighborhood architectures.
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Single-cell and spatial transcriptome analysis reveals the potential therapeutic targets for testicular sex cord-stromal cell tumor.
PMID 42057139 · PMC13130799 · Biomarker research · 2026 · 8 claims · 8 setups
Tumor areas of TSCST show significantly low expression of immune cell genes, indicating an immune-cold tumor microenvironment
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Serial Spatial Transcriptomes Reveal Regulatory Transitions in Maize Leaf Development.
PMID 41493197 · PMC13110159 · Plant biotechnology journal · 2026 · 8 claims · 5 setups
An optimised Visium spatial transcriptomics protocol (two-step OCT embedding combined with OCT-Immersion First cryopreservation) preserves high-integrity RNA from fragile plant tissues such as SAM