Experiments
Searchable full-text extractions: founding hypothesis, core claims, experimental setups, key results and statistics — pulled out of each paper as structure. Search a cell line, an assay or an entity (e.g. HUH7) and find every paper that worked with it. This corpus stands on its own: most entries carry no reproduction assessment (yet).
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Has reproduction · 75
Dynamic reversal of random X-Chromosome inactivation during iPSC reprogramming.
PMID 31515287 · PMC6771397 · Genome research · 2019 · 7 claims · 6 setups
XCR during iPSC reprogramming is hierarchical, with distinct subsets of X-linked genes reactivating early, intermediate, late, and very late
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Full-text index only
Genetic diversity and regulatory features of human-specific NOTCH2NL duplications.
PMID 41916274 · PMC13261667 · Cell genomics · 2026 · 8 claims · 7 setups
NOTCH2NL-like duplications occurred independently and recurrently across great ape lineages, but protein-coding NOTCH2NL copies emerged only in humans, ~2.2-3.7 mya
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Has reproduction · 50
Quality control method for RNA-seq using single nucleotide polymorphism allele frequency.
PMID 25243705 · PMC4231238 · Genes to cells : devoted to molecular & cellular mechanisms · 2014 · 8 claims · 8 setups
SNP allele frequency distributions from RNA-seq reads can detect contaminating cells whose genomic background differs from the target cells; the mode of the distribution reflects the cellular composition while its variance reflects PCR bias.
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Systematic background selection with BasCoD enhances contrastive dimension reduction in single cell genomics.
PMID 41844632 · PMC13144610 · Nature communications · 2026 · 8 claims · 7 setups
BasCoD is a statistical testing framework using spectral subspace inclusion theory to evaluate whether a candidate background dataset is suitable for contrastive dimension reduction of a target dataset