Experiments
Searchable full-text extractions: founding hypothesis, core claims, experimental setups, key results and statistics — pulled out of each paper as structure. Search a cell line, an assay or an entity (e.g. HUH7) and find every paper that worked with it. This corpus stands on its own: most entries carry no reproduction assessment (yet).
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Has reproduction · 52
Social complexity, life-history and lineage influence the molecular basis of castes in vespid wasps.
PMID 36828829 · PMC9958023 · Nature communications · 2023 · 8 claims · 7 setups
A shared genetic toolkit of caste-associated genes exists across vespid wasp species spanning different levels of social complexity
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Has reproduction · 89
miRge 2.0 for comprehensive analysis of microRNA sequencing data.
PMID 30153801 · PMC6112139 · BMC bioinformatics · 2018 · 8 claims · 6 setups
An SVM-based novel miRNA detection model achieves an average MCC of 0.939 across 32 human cell datasets and outperforms miRDeep2 and miRAnalyzer on phylogenetic conservation of predicted miRNAs
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Full-text index only
Exploring phenotype-related single-cells through attention-enhanced representation learning.
PMID 41566378 · PMC12906058 · Genome medicine · 2026 · 6 claims · 5 setups
scPhase, an attention-based multiple instance learning (AMIL) framework with Mixture-of-Experts aggregation, predicts sample-level clinical phenotypes from raw scRNA-seq data and generalizes across patient cohorts
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Full-text index only
ICE: robust detection of cellular senescence from weak single-cell signatures using imputation-based marker refinement.
PMID 41668152 · PMC12990438 · Genome biology · 2026 · 8 claims · 7 setups
Senescence-associated marker genes show weak, non-specific expression across human tissues and cell types compared to canonical tissue/cell-type markers