Experiments
Searchable full-text extractions: founding hypothesis, core claims, experimental setups, key results and statistics — pulled out of each paper as structure. Search a cell line, an assay or an entity (e.g. HUH7) and find every paper that worked with it. This corpus stands on its own: most entries carry no reproduction assessment (yet).
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DANST enables cell-type deconvolution in spatial transcriptomics using deep domain adversarial neural networks.
PMID 41663685 · PMC12996496 · Communications biology · 2026 · 7 claims · 6 setups
DANST, a deconvolution framework using deep domain adversarial neural networks, achieves superior cell-type deconvolution accuracy compared with existing methods on human and mouse benchmark datasets
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Spatial transcriptomics maps host-gut microbiome biogeography at high resolution.
PMID 41792309 · PMC13171632 · Nature microbiology · 2026 · 7 claims · 6 setups
Enzymatic in situ polyadenylation increases bacterial RNA recovery in oligo(dT)-based spatial transcriptomics arrays by up to ~100-fold while preserving host gene capture
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Single-cell and spatial transcriptomic profiling of cardiac fibroblasts following myocardial infarction.
PMID 41526391 · PMC12890913 · Scientific data · 2026 · 7 claims · 6 setups
Cthrc1+ Reparative Cardiac Fibroblasts (RCFs) are the primary driver of the cardiac healing process after myocardial infarction
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PreTSA: computationally efficient modeling of temporal and spatial gene expression patterns.
PMID 41673899 · PMC12998178 · Genome biology · 2026 · 7 claims · 8 setups
PreTSA dramatically reduces computational time and memory versus GAM (Monocle, TSCAN) and PseudotimeDE for identifying temporally variable genes (TVGs) while producing highly similar results