Experiments

Searchable full-text extractions: founding hypothesis, core claims, experimental setups, key results and statistics — pulled out of each paper as structure. Search a cell line, an assay or an entity (e.g. HUH7) and find every paper that worked with it. This corpus stands on its own: most entries carry no reproduction assessment (yet).

Publications 1.3k Datasets 392.5k Experiments 4

System / cell line: pathway ✕ Assay: whole-transcriptome ✕ Clear

Genomic biomarkers of immunotherapy plus chemotherapy in patients with advanced NSCLC: Insights from the phase 3 ORIENT-11 study.

PMID 41660271 · PMC12876322 · iScience · 2026 · 8 claims · 8 setups

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A 9-gene Immune-Chemotherapy Prediction Score (ICPscore), derived from ORIENT-11 via WGCNA and LASSO Cox regression, predicts survival benefit from ICI plus chemotherapy in advanced NSCLC

orient-11 hub nsclc oak bulk pd-l1 wgcna
Identification of Radiation-Induced Injury Pathways and Hub Genes from RNA-Seq Data Based on Integrative Bioinformatics Approach.

PMID 42074497 · PMC13116960 · Genes · 2026 · 8 claims · 6 setups

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Ionizing radiation induces extensive transcriptome reprogramming in mouse bone marrow HSCs 3 days after whole-body irradiation.

bone deg transcriptome deg-encoded rna-seq gene kegg
Molecular profiling of breast cancer in native American women reveals distinct genomic and transcriptomic features.

PMID 41844957 · PMC13144316 · NPJ precision oncology · 2026 · 8 claims · 6 setups

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This is the first multi-omics (mutation, CNV, RNA-seq) characterization of breast tumors from Native American women, providing a resource for future studies

breast degs targeted panel-derived whole-transcriptome
Enterotoxins A and B produced by Staphylococcus aureus increase cell proliferation, invasion and cytarabine resistance in acute myeloid leukemia cell lines.

PMID 37810000 · PMC10559070 · Heliyon · 2023 · 8 claims · 8 setups

Has reproduction · 88

SEA and SEB treatment increases cell proliferation in AML cell lines

aml cgp differentially proliferation culture transwell

Experiments

Genomic biomarkers of immunotherapy plus chemotherapy in patients with advanced NSCLC: Insights from the phase 3 ORIENT-11 study.

Identification of Radiation-Induced Injury Pathways and Hub Genes from RNA-Seq Data Based on Integrative Bioinformatics Approach.

Molecular profiling of breast cancer in native American women reveals distinct genomic and transcriptomic features.

Enterotoxins A and B produced by Staphylococcus aureus increase cell proliferation, invasion and cytarabine resistance in acute myeloid leukemia cell lines.