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85 matching publication(s)

Publication	Journal	Year	Score	Verdict
PDGFRA defines the mesenchymal stem cell Kaposi's sarcoma progenitors by enabling KSHV oncogenesis in an angiogenic environment. PMID 31881074	PLoS Pathog	2019	85	L1 85/100
Electron Energy Partition across Interplanetary Shocks. I. Methodology and Data Product. PMID 31806920	Astrophys J Suppl Ser	2019	92	L1 92/100
mitoXplorer, a visual data mining platform to systematically analyze and visualize mitochondrial expression dynamics and mutations. PMID 31799603	Nucleic Acids Res	2020	89	L1 89/100
Contribution of retrotransposition to developmental disorders. PMID 31604926	Nat Commun	2019	79	L1 79/100
Spatially clustered loci with multiple enhancers are frequent targets of HIV-1 integration. PMID 31492853	Nat Commun	2019	77	L1 77/100
pysradb: A Python package to query next-generation sequencing metadata and data from NCBI Sequence Read Archive. PMID 31114675	F1000Res	2019	90	L1 90/100
pwrEWAS: a user-friendly tool for comprehensive power estimation for epigenome wide association studies (EWAS). PMID 31035919	BMC Bioinformatics	2019	88	L1 88/100
Widespread nitrous oxide undersaturation in farm waterbodies creates an unexpected greenhouse gas sink. PMID 31036633	Proc Natl Acad Sci U S A	2019	87	L1 87/100
The exonuclease Xrn1 activates transcription and translation of mRNAs encoding membrane proteins. PMID 30899024	Nat Commun	2019	85	L1 85/100
CellFishing.jl: an ultrafast and scalable cell search method for single-cell RNA sequencing. PMID 30744683	Genome Biol	2019	97	L1 97/100
PI3K inhibitors protect against glucocorticoid-induced skin atrophy. PMID 30737086	EBioMedicine	2019	76	L1 76/100
Transcriptomic and functional analyses of the piRNA pathway in the Chagas disease vector Rhodnius prolixus. PMID 30303955	PLoS Negl Trop Dis	2018	94	L1 94/100
Genomic Description of 'Candidatus Abyssubacteria,' a Novel Subsurface Lineage Within the Candidate Phylum Hydrogenedentes. PMID 30210471	Front Microbiol	2018	91	L1 91/100
miRge 2.0 for comprehensive analysis of microRNA sequencing data. PMID 30153801	BMC Bioinformatics	2018	89	L1 89/100
Metabolite-Centric Reporter Pathway and Tripartite Network Analysis of Arabidopsis Under Cold Stress. PMID 30258841	Front Bioeng Biotechnol	2018	83	L1 83/100
Immuno-detection by sequencing enables large-scale high-dimensional phenotyping in cells. PMID 29921844	Nat Commun	2018	96	L1 96/100
Expansion of the SOS regulon of Vibrio cholerae through extensive transcriptome analysis and experimental validation. PMID 29783948	BMC Genomics	2018	85	L1 85/100
The Cohesin Ring Uses Its Hinge to Organize DNA Using Non-topological as well as Topological Mechanisms. PMID 29754816	Cell	2018	80	L1 80/100
Verrucomicrobia are prevalent in north-temperate freshwater lakes and display class-level preferences between lake habitats. PMID 29590198	PLoS One	2018	99	L1 99/100
Invasive bacterial disease trends and characterization of group B streptococcal isolates among young infants in southern Mozambique, 2001-2015. PMID 29351318	PLoS One	2018	97	L1 97/100
Easy and efficient ensemble gene set testing with EGSEA. PMID 29333246	F1000Res	2017	97	L1 97/100
Viral Diagnostics in Plants Using Next Generation Sequencing: Computational Analysis in Practice. PMID 29123534	Front Plant Sci	2017	100	L1 100/100
Genome-wide identification of conserved and novel microRNAs in one bud and two tender leaves of tea plant (Camellia sinensis) by small RNA sequencing, microarra PMID 29157210	BMC Plant Biol	2017	91	L1 91/100
Genome-wide prediction of DNase I hypersensitivity using gene expression. PMID 29051481	Nat Commun	2017	79	L1 79/100
Large-Scale Phylogenomics of the Lactobacillus casei Group Highlights Taxonomic Inconsistencies and Reveals Novel Clade-Associated Features. PMID 28845461	mSystems	2017	94	L1 94/100
Activity of distinct growth factor receptor network components in breast tumors uncovers two biologically relevant subtypes. PMID 28446242	Genome Med	2017	92	L1 92/100
Distributed biotin-streptavidin transcription roadblocks for mapping cotranscriptional RNA folding. PMID 28398514	Nucleic Acids Res	2017	77	L1 77/100
Identification and Characterization of Small Noncoding RNAs in Genome Sequences of the Edible Fungus Pleurotus ostreatus. PMID 27703969	Biomed Res Int	2016	95	L1 95/100
A robust data scaling algorithm to improve classification accuracies in biomedical data. PMID 27612635	BMC Bioinformatics	2016	87	87/100
CoINcIDE: A framework for discovery of patient subtypes across multiple datasets. PMID 26961683	Genome Med	2016	87	L1 87/100
Topologically inferring pathway activity toward precise cancer classification via integrating genomic and metabolomic data: prostate cancer as a case. PMID 26286638	Sci Rep	2015	76	L1 76/100
A Deluge of Complex Repeats: The Solanum Genome. PMID 26241045	PLoS One	2015	94	L1 94/100
Cell Specific eQTL Analysis without Sorting Cells. PMID 25955312	PLoS Genet	2015	90	L1 90/100
Conservation and losses of non-coding RNAs in avian genomes. PMID 25822729	PLoS One	2015	100	L1 100/100
Ribosome A and P sites revealed by length analysis of ribosome profiling data. PMID 25805170	Nucleic Acids Res	2015	81	L1 81/100