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10 matching publication(s)
RAGER: A user-friendly computational platform for integrated analysis of RNA-Seq and ATAC-seq data.
PMID 42172220 · PLoS One · 2026
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Community assessment of methods to deconvolve cellular composition from bulk gene expression.
PMID 39191725 · Nat Commun · 2024
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63/100
Identification of the stress granule transcriptome via RNA-editing in single cells and in vivo.
PMID 35784648 · Cell Rep Methods · 2022
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66/100
miEAA 2.0: integrating multi-species microRNA enrichment analysis and workflow management systems.
PMID 32374865 · Nucleic Acids Res · 2020
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61/100
Regulatory Noncoding Small RNAs Are Diverse and Abundant in an Extremophilic Microbial Community.⚑
PMID 32019831 · mSystems · 2020
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57/100
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Transcriptomic profiling of skeletal muscle adaptations to exercise and inactivity.
PMID 31980607 · Nat Commun · 2020
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52/100
Wx: a neural network-based feature selection algorithm for transcriptomic data.
PMID 31324856 · Sci Rep · 2019
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50/100
Octopus-toolkit: a workflow to automate mining of public epigenomic and transcriptomic next-generation sequencing data.
PMID 29420797 · Nucleic Acids Res · 2018
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68/100
Proteogenomic analysis prioritises functional single nucleotide variants in cancer samples.⚑
PMID 29221171 · Oncotarget · 2017
73/100
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An open RNA-Seq data analysis pipeline tutorial with an example of reprocessing data from a recent Zika virus study.
PMID 27583132 · F1000Res · 2016
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74/100