Publications 39 Datasets 392.5k Experiments 4.7k

Explore

39 matching publication(s)

Publication	Journal	Year	Score	Verdict
Identification of key genes in chickpea transcriptomics and the development of ChickpeaOmicsR as a comprehensive resource to advance breeding and genomic studie ⚑ PMID 41909810	Front Bioinform	2026	56	L1 56/100 ⚑
Endogenous retroviral elements LTR8B and MER65 rewire PSG9 regulation to control trophoblast syncytialization and pre-eclampsia risk. PMID 41796334	Genome Biol	2026	68	L1 68/100
Integrated multi-omics analysis combined with clinical validation reveals that HLA-DRB5 and ODAPH are causal risk genes for keratoconus. PMID 41803193	Sci Rep	2026	64	L1 64/100
iceDP: identifying inter-chromatin engagement via density peaks clustering algorithm. ⚑ PMID 41499218	Brief Bioinform	2026	53	L1 53/100 ⚑
ASTRA: a comprehensive resource of stress-induced transcriptional activity in human cell lines. ⚑ PMID 41263110	Nucleic Acids Res	2026	73	L1 73/100 ⚑
Cell type- and species-specific regulation of hepatic lncRNAs by TCDD-activated aryl hydrocarbon receptor. PMID 41136526	Sci Rep	2025	71	L1 71/100
Distinct senotypes in p16- and p21-positive cells across human and mouse aging tissues. PMID 41162753	EMBO J	2025	50	L1 50/100
Specific Marker Gene Analysis for Primary Central Nervous System Lymphoma Based on Methylation Difference and Development of Detection Primers. PMID 41097902	Brain Behav	2025	62	L1 62/100
Cell type-specific eQTL analysis of COVID-19 based on single-cell transcriptomic data. ⚑ PMID 41064594	NAR Genom Bioinform	2025	51	L1 51/100 ⚑
Data-driven projections of candidate enhancer-activating SNPs in immune regulation. PMID 40011812	BMC Genomics	2025	57	L1 57/100
A gene signature related to programmed cell death to predict immunotherapy response and prognosis in colon adenocarcinoma. PMID 39950044	PeerJ	2025	73	73/100
Differentiation status determines the effects of IFNγ on the expression of PD-L1 and immunomodulatory genes in melanoma. PMID 39736644	Cell Commun Signal	2024	61	L1 61/100
RummaGEO: Automatic mining of human and mouse gene sets from GEO. PMID 39569206	Patterns (N Y)	2024	63	L1 63/100
Exploring the prognostic and diagnostic value of lactylation-related genes in sepsis. PMID 39367086	Sci Rep	2024	73	L1 73/100
Identifying human pre-mRNA cleavage and polyadenylation factors by genome-wide CRISPR screens using a dual fluorescence readthrough reporter. PMID 38587191	Nucleic Acids Res	2024	68	L1 68/100
Single cell analysis reveals the roles and regulatory mechanisms of type-I interferons in Parkinson's disease. PMID 38566100	Cell Commun Signal	2024	55	L1 55/100
Identification of the shared hub gene signatures and molecular mechanisms between HIV-1 and pulmonary arterial hypertension. PMID 38528047	Sci Rep	2024	71	L1 71/100
Gbdmr: identifying differentially methylated CpG regions in the human genome via generalized beta regressions. ⚑ PMID 38443825	BMC Bioinformatics	2024	62	L1 62/100 ⚑
Design of a targeted blood transcriptional panel for monitoring immunological changes accompanying pregnancy. PMID 38352867	Front Immunol	2024	73	L1 73/100
Refining breast cancer biomarker discovery and drug targeting through an advanced data-driven approach. PMID 38253993	BMC Bioinformatics	2024	59	59/100
Machine learning algorithm predicts fibrosis-related blood diagnosis markers of intervertebral disc degeneration. PMID 37915003	BMC Med Genomics	2023	68	L1 68/100
Identification of herpesvirus transcripts from genomic regions around the replication origins. PMID 37773348	Sci Rep	2023	59	L1 59/100
Identification and verification of diagnostic biomarkers in recurrent pregnancy loss via machine learning algorithm and WGCNA. ⚑ PMID 37691920	Front Immunol	2023	55	L1 55/100 ⚑
Utilizing the codon adaptation index to evaluate the susceptibility to HIV-1 and SARS-CoV-2 related coronaviruses in possible target cells in humans. PMID 36760235	Front Cell Infect Microbiol	2023	71	L1 71/100
Extensive androgen receptor enhancer heterogeneity in primary prostate cancers underlies transcriptional diversity and metastatic potential. PMID 36450752	Nat Commun	2022	70	L1 70/100
Cost-effectively dissecting the genetic architecture of complex wool traits in rabbits by low-coverage sequencing. PMID 36401180	Genet Sel Evol	2022	50	L1 50/100
Mod(mdg4) variants repress telomeric retrotransposon HeT-A by blocking subtelomeric enhancers. PMID 36373634	Nucleic Acids Res	2022	68	L1 68/100
spliceJAC: transition genes and state-specific gene regulation from single-cell transcriptome data. ⚑ PMID 36321549	Mol Syst Biol	2022	53	L1 53/100 ⚑
Identification of intrinsic genes across general hypertension, hypertension with left ventricular remodeling, and uncontrolled hypertension. PMID 36277786	Front Cardiovasc Med	2022	73	L1 73/100
Gene module regulation in dilated cardiomyopathy and the role of Na/K-ATPase. ⚑ PMID 35901050	PLoS One	2022	55	L1 55/100 ⚑
Identifying Molecular Subtypes and 6-Gene Prognostic Signature Based on Hypoxia for Optimizing Targeted Therapies in Non-Small Cell Lung Cancer. PMID 35509605	Int J Gen Med	2022	59	L1 59/100
Cell-Type-Specific Gene Modules Related to the Regional Homogeneity of Spontaneous Brain Activity and Their Associations With Common Brain Disorders. PMID 33958982	Front Neurosci	2021	59	L1 59/100
Prime editing in mice reveals the essentiality of a single base in driving tissue-specific gene expression. PMID 33722289	Genome Biol	2021	66	L1 66/100
Regulatory Noncoding Small RNAs Are Diverse and Abundant in an Extremophilic Microbial Community. ⚑ PMID 32019831	mSystems	2020	57	L1 57/100 ⚑
Core transcriptional signatures of phase change in the migratory locust. ⚑ PMID 31292921	Protein Cell	2019	60	L1 60/100 ⚑
A methyl-sensitive element induces bidirectional transcription in TATA-less CpG island-associated promoters. PMID 30332484	PLoS One	2018	63	L1 63/100
Analysis of the genome of the New Zealand giant collembolan (Holacanthella duospinosa) sheds light on hexapod evolution. PMID 29041914	BMC Genomics	2017	72	L1 72/100
Phylogenetic analysis of higher-level relationships within Hydroidolina (Cnidaria: Hydrozoa) using mitochondrial genome data and insight into their mitochondria ⚑ PMID 26618080	PeerJ	2015	68	L1 68/100 ⚑
Transcriptome analysis provides insights into the regulatory function of alternative splicing in antiviral immunity in grass carp (Ctenopharyngodon idella). ⚑ PMID 26248502	Sci Rep	2015	70	L1 70/100 ⚑