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43 matching publication(s)

Publication	Journal	Year	Score	Verdict
Elucidation of the molecular responses to waterlogging in Jatropha roots by transcriptome profiling. PMID 25520726	Front Plant Sci	2014	93	93/100
TRIM28 repression of retrotransposon-based enhancers is necessary to preserve transcriptional dynamics in embryonic stem cells. PMID 23233547	Genome Res	2012	78	L1 78/100
KCNQ4, a novel potassium channel expressed in sensory outer hair cells, is mutated in dominant deafness. PMID 10025409	Cell	1999	88	L1 88/100
Single-cell protein activity analysis reveals aberrant myogenesis and IGF2-PI3K pathway dependencies in MYOD1-mutant rhabdomyosarcoma. PMID 41758938	Sci Adv	2026	84	L1 84/100
In vivo prime editing rescues alternating hemiplegia of childhood in mice. PMID 40695277	Cell	2025	84	L1 84/100
Direct observations of cross-scale wave-particle energy transfer in space plasmas. PMID 39919183	Sci Adv	2025	94	94/100
Variants in LRRC7 lead to intellectual disability, autism, aggression and abnormal eating behaviors PMID 39256359	—	2024	87	L1 87/100
Single-cell multiomics profiling reveals heterogeneous transcriptional programs and microenvironment in DSRCTs. PMID 38781959	Cell Rep Med	2024	76	L1 76/100
Uncertainty in the mating strategy of honeybees causes bias and unreliability in the estimates of genetic parameters. PMID 38632535	Genet Sel Evol	2024	98	L1 98/100
DNA binding analysis of rare variants in homeodomains reveals homeodomain specificity-determining residues. PMID 38600112	Nat Commun	2024	93	L1 93/100
The genome of the ant Tetramorium bicarinatum reveals a tandem organization of venom peptides genes allowing the prediction of their regulatory and evolutionary PMID 38245722	BMC Genomics	2024	100	L1 100/100
A multiple super-enhancer region establishes inter-TAD interactions and controls Hoxa function in cranial neural crest. PMID 37277355	Nat Commun	2023	94	L1 94/100
TrEMOLO: accurate transposable element allele frequency estimation using long-read sequencing data combining assembly and mapping-based approaches. PMID 37013657	Genome Biol	2023	89	L1 89/100
Multiomic analysis of malignant pleural mesothelioma identifies molecular axes and specialized tumor profiles driving intertumor heterogeneity. PMID 36928603	Nat Genet	2023	80	L1 80/100
An improved assembly of the pearl millet reference genome using Oxford Nanopore long reads and optical mapping. PMID 36891809	G3 (Bethesda)	2023	90	L1 90/100
Whole-genome sequencing of cryopreserved resources from French Large White pigs at two distinct sampling times reveals strong signatures of convergent and diver PMID 36864379	Genet Sel Evol	2023	100	L2 100/100
Identification of genes influencing the evolution of Escherichia coli ST372 in dogs and humans. PMID 36752777	Microb Genom	2023	89	L1 89/100
A step forward for Shiga toxin-producing Escherichia coli identification and characterization in raw milk using long-read metagenomics. PMID 36748417	Microb Genom	2022	75	L1 75/100
A network-guided protocol to discover susceptibility genes in genome-wide association studies using stability selection. PMID 36609152	STAR Protoc	2023	92	L1 92/100
getSequenceInfo: a suite of tools allowing to get genome sequence information from public repositories. PMID 35804320	BMC Bioinformatics	2022	99	L1 99/100
Deep learning from phylogenies to uncover the epidemiological dynamics of outbreaks. PMID 35794110	Nat Commun	2022	94	L1 94/100
Transcriptional regulation and chromatin architecture maintenance are decoupled functions at the Sox2 locus. PMID 35710138	Genes Dev	2022	81	L1 81/100
Utility of Triti-Map for bulk-segregated mapping of causal genes and regulatory elements in Triticeae. PMID 35605195	Plant Commun	2022	95	L1 95/100
Genome and cuticular hydrocarbon-based species delimitation shed light on potential drivers of speciation in a Neotropical ant species complex. PMID 35342602	Ecol Evol	2022	87	L1 87/100
A role for ColV plasmids in the evolution of pathogenic Escherichia coli ST58. PMID 35115531	Nat Commun	2022	95	L1 95/100
A whole genome duplication drives the genome evolution of Phytophthora betacei, a closely related species to Phytophthora infestans. PMID 34740326	BMC Genomics	2021	95	L1 95/100
Evolutionary Genomics of Sex-Related Chromosomes at the Base of the Green Lineage. PMID 34599324	Genome Biol Evol	2021	84	L1 84/100
Dynamics of the compartmentalized Streptomyces chromosome during metabolic differentiation. PMID 34471117	Nat Commun	2021	97	L1 97/100
Competitive binding of STATs to receptor phospho-Tyr motifs accounts for altered cytokine responses. PMID 33871355	Elife	2021	89	L1 89/100
The SARS-CoV-2 subgenome landscape and its novel regulatory features. PMID 33713597	Mol Cell	2021	84	L1 84/100
CRISPRbuilder-TB: "CRISPR-builder for tuberculosis". Exhaustive reconstruction of the CRISPR locus in mycobacterium tuberculosis complex using SRA. PMID 33667225	PLoS Comput Biol	2021	97	L1 97/100
A choreography of centrosomal mRNAs reveals a conserved localization mechanism involving active polysome transport. PMID 33649340	Nat Commun	2021	96	L1 96/100
4-Methylcytosine DNA modification is critical for global epigenetic regulation and virulence in the human pathogen Leptospira interrogans. PMID 33301041	Nucleic Acids Res	2020	78	L1 78/100
PD-1 and TIGIT coexpression identifies a circulating CD8 T cell subset predictive of response to anti-PD-1 therapy. PMID 33188038	J Immunother Cancer	2020	75	L1 75/100
From bud formation to flowering: transcriptomic state defines the cherry developmental phases of sweet cherry bud dormancy. PMID 31830909	BMC Genomics	2019	88	L1 88/100
mitoXplorer, a visual data mining platform to systematically analyze and visualize mitochondrial expression dynamics and mutations. PMID 31799603	Nucleic Acids Res	2020	89	L1 89/100
Structure of the intergenic spacers in chicken ribosomal DNA. PMID 31655542	Genet Sel Evol	2019	80	L1 80/100
SMAGEXP: a galaxy tool suite for transcriptomics data meta-analysis. PMID 30698691	Gigascience	2019	82	L1 82/100
GC-biased gene conversion conceals the prediction of the nearly neutral theory in avian genomes. PMID 30616647	Genome Biol	2019	96	L1 96/100
Expansion of the SOS regulon of Vibrio cholerae through extensive transcriptome analysis and experimental validation. PMID 29783948	BMC Genomics	2018	85	L1 85/100
Metavisitor, a Suite of Galaxy Tools for Simple and Rapid Detection and Discovery of Viruses in Deep Sequence Data. PMID 28045932	PLoS One	2017	78	L1 78/100
Representing and querying disease networks using graph databases. PMID 27462371	BioData Min	2016	77	L1 77/100
Mutations in GRIN2A and GRIN2B encoding regulatory subunits of NMDA receptors cause variable neurodevelopmental phenotypes. PMID 20890276	—	2010	96	96/100