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42 matching publication(s)

Publication	Journal	Year	Score	Verdict
RNA-sequence analysis of primary alveolar macrophages after in vitro infection with porcine reproductive and respiratory syndrome virus strains of differing vir ⚑ PMID 24643046	PLoS One	2014	41	41/100 ⚑
Identifying and classifying trait linked polymorphisms in non-reference species by walking coloured de bruijn graphs. ⚑ PMID 23536903	PLoS One	2013	45	L1 45/100 ⚑
Irisin ameliorates obesity and insulin resistance via adipose tissue IL-33 and regulatory T cells. PMID 41933175	Nature metabolism	2026	48	L1 48/100
StatsDB: platform-agnostic storage and understanding of next generation sequencing run metrics. ⚑ PMID 24627795	F1000Res	2013	43	L1 43/100 ⚑
taxize: taxonomic search and retrieval in R. ⚑ PMID 24555091	F1000Res	2013	30	L1 30/100 ⚑
Genomic and transcriptomic plasticity in treatment-naive ovarian cancer. PMID 24221193	Genome Res	2013	30	L1 30/100
Genome-wide signatures of convergent evolution in echolocating mammals. PMID 24005325	Nature	2013	—	not yet assessed
Integrated analysis of post-transcriptional regulations reveals insights into acute myeloid leukemia. ⚑ PMID 41407883	Commun Biol	2025	32	L1 32/100 ⚑
Gli1-expressing stromal cells are highly reparative precursors of long-lived chondroprogenitors in the fetal murine limb. ⚑ PMID 41253754	Nat Commun	2025	10	L1 10/100 ⚑
Thoracic aortic diseases: Identification of diagnostic biomarkers using proteomic analysis ⚑ PMID 41061941	—	2025	23	L1 23/100 ⚑
A Reference DNA Barcode Library for UK Fungi associated with Bark and Ambrosia Beetles. PMID 41022899	Sci Data	2025	44	L1 44/100
Improved epigenetic age prediction models by combining sex chromosome and autosomal markers. PMID 40665390	Epigenetics Chromatin	2025	48	L1 48/100
Advanced Methods for Analyzing in-Situ Observations of Magnetic Reconnection. PMID 39234211	Space Sci Rev	2024	—	L1 No computation
On the holobiont 'predictome' of immunocompetence in pigs. ⚑ PMID 37127575	Genet Sel Evol	2023	40	L1 40/100 ⚑
Genomic capacities for Reactive Oxygen Species metabolism across marine phytoplankton. ⚑ PMID 37098087	PLoS One	2023	38	L1 38/100 ⚑
Orthogonal cytokine engineering enables novel synthetic effector states escaping canonical exhaustion in tumor-rejecting CD8+ T cells. PMID 37081150	Nat Immunol	2023	37	L1 37/100
Gene Regulatory Interactions at Lamina-Associated Domains. ⚑ PMID 36833261	Genes (Basel)	2023	31	L1 31/100 ⚑
Integrating transcriptomic datasets across neurological disease identifies unique myeloid subpopulations driving disease-specific signatures. ⚑ PMID 36527260	Glia	2022	26	L1 26/100 ⚑
RNA Editing Alterations Define Disease Manifestations in the Progression of Experimental Autoimmune Encephalomyelitis (EAE). ⚑ PMID 36429012	Cells	2022	37	L1 37/100 ⚑
KAGE: fast alignment-free graph-based genotyping of SNPs and short indels. ⚑ PMID 36195962	Genome Biol	2022	42	L1 42/100 ⚑
A novel HRAS c.466C>T p.(Phe156Leu) variant in two patients with attenuated features of Costello syndrome. PMID 35764878	—	2022	—	L1 No computation
Glacier shrinkage will accelerate downstream decomposition of organic matter and alters microbiome structure and function. ⚑ PMID 35320603	Glob Chang Biol	2022	39	L1 39/100 ⚑
Metagenetic and Volatilomic Approaches to Elucidate the Effect of Lactiplantibacillus plantarum Starter Cultures on Sicilian Table Olives. ⚑ PMID 35281313	Front Microbiol	2022	23	L1 23/100 ⚑
Comparative analysis of molecular signatures reveals a hybrid approach in breast cancer: Combining the Nottingham Prognostic Index with gene expressions into a ⚑ PMID 35143511	PLoS One	2022	48	L1 48/100 ⚑
Phased differentiation of γδ T and T CD8 tumor-infiltrating lymphocytes revealed by single-cell transcriptomics of human cancers. ⚑ PMID 34721945	Oncoimmunology	2021	44	L1 44/100 ⚑
Antigen and checkpoint receptor engagement recalibrates T cell receptor signal strength. ⚑ PMID 34534438	Immunity	2021	37	L1 37/100 ⚑
Interplay between Non-Coding RNA Transcription, Stringent/Relaxed Phenotype and Antibiotic Production in Streptomyces ambofaciens. PMID 34438997	Antibiotics (Basel)	2021	49	49/100
Accelerated Evolution of Tissue-Specific Genes Mediates Divergence Amidst Gene Flow in European Green Lizards. ⚑ PMID 33988711	Genome Biol Evol	2021	23	L1 23/100 ⚑
An OMICs-based meta-analysis to support infection state stratification. PMID 33560295	Bioinformatics	2021	44	L1 44/100
TFEB deficiency attenuates mitochondrial degradation upon brown adipose tissue whitening at thermoneutrality PMID 33516944	Molecular Metabolism 47:101173	2021	—	L1 No computation
Plant Soft Rot Development and Regulation from the Viewpoint of Transcriptomic Profiling. ⚑ PMID 32927917	Plants (Basel)	2020	—	L1 No data access ⚑
Molecular and Clinical Relevance of ZBTB38 Expression Levels in Prostate Cancer. ⚑ PMID 32365491	Cancers (Basel)	2020	35	L1 35/100 ⚑
CRISPR/Cas9 Screens Reveal Multiple Layers of B cell CD40 Regulation. PMID 31365872	Cell Rep	2019	—	L1 No data access
Accurate sequence variant genotyping in cattle using variation-aware genome graphs. ⚑ PMID 31092189	Genet Sel Evol	2019	45	L1 45/100 ⚑
First step toward gene expression data integration: transcriptomic data acquisition with COMMAND>_. ⚑ PMID 30691411	BMC Bioinformatics	2019	30	L1 30/100 ⚑
Single-Cell Sequencing of iPSC-Dopamine Neurons Reconstructs Disease Progression and Identifies HDAC4 as a Regulator of Parkinson Cell Phenotypes. ⚑ PMID 30503143	Cell Stem Cell	2018	30	L1 30/100 ⚑
Cancer cells copy migratory behavior and exchange signaling networks via extracellular vesicles. PMID 29907695	EMBO J	2018	46	L1 46/100
FoxO transcription factors are required for hepatic HDL cholesterol clearance PMID 29408809	—	2018	49	L1 49/100
Exposure to the widely used herbicide atrazine results in deregulation of global tissue-specific RNA transcription in the third generation and is associated wit ⚑ PMID 27655631	Nucleic Acids Res	2016	10	L1 10/100 ⚑
Distinct lncRNA transcriptional fingerprints characterize progressive stages of multiple myeloma. ⚑ PMID 26895470	Oncotarget	2016	36	L1 36/100 ⚑
Dysfunction of SHANK2 and CHRNA7 in a patient with intellectual disability and language impairment supports genetic epistasis of the two loci. PMID 23350639	Clinical genetics	2013	—	L1 No computation
Predicting favorable landing pads for targeted integrations in Chinese hamster ovary cell lines by learning stability characteristics from random transgene inte PMID 33304461	Comput Struct Biotechnol J	2020	—	not yet assessed