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303 matching publication(s)
Chromosome-level genome assembly of Lilford's wall lizard, Podarcis lilfordi (Günther, 1874) from the Balearic Islands (Spain).
PMID 37137526 · DNA Res · 2023
85/100
VirPipe: an easy-to-use and customizable pipeline for detecting viral genomes from Nanopore sequencing.
PMID 37129547 · Bioinformatics · 2023
L1
83/100
Single duplex DNA sequencing with CODEC detects mutations with high sensitivity.
PMID 37106072 · Nat Genet · 2023
L1
78/100
Predicting the pathogenicity of missense variants using features derived from AlphaFold2.
PMID 37084271 · Bioinformatics · 2023
L1
85/100
Improved eukaryotic detection compatible with large-scale automated analysis of metagenomes.
PMID 37032329 · Microbiome · 2023
L1
89/100
transXpress: a Snakemake pipeline for streamlined de novo transcriptome assembly and annotation.
PMID 37016291 · BMC Bioinformatics · 2023
L1
95/100
TrEMOLO: accurate transposable element allele frequency estimation using long-read sequencing data combining assembly and mapping-based approaches.
PMID 37013657 · Genome Biol · 2023
L1
89/100
Transcriptomic data meta-analysis reveals common and injury model specific gene expression changes in the regenerating zebrafish heart.
PMID 37012284 · Sci Rep · 2023
L2
90/100
Prioritized mass spectrometry increases the depth, sensitivity and data completeness of single-cell proteomics.
PMID 37012480 · Nat Methods · 2023
L1
90/100
nf-core/isoseq: simple gene and isoform annotation with PacBio Iso-Seq long-read sequencing.
PMID 36961337 · Bioinformatics · 2023
L1
88/100
Multiomic analysis of malignant pleural mesothelioma identifies molecular axes and specialized tumor profiles driving intertumor heterogeneity.
PMID 36928603 · Nat Genet · 2023
L1
80/100
An improved assembly of the pearl millet reference genome using Oxford Nanopore long reads and optical mapping.
PMID 36891809 · G3 (Bethesda) · 2023
L1
90/100
Assessing the impacts of COVID-19 vaccination programme's timing and speed on health benefits, cost-effectiveness, and relative affordability in 27 African coun
PMID 36882868 · BMC Med · 2023
L1
89/100
Whole-genome sequencing of cryopreserved resources from French Large White pigs at two distinct sampling times reveals strong signatures of convergent and diver
PMID 36864379 · Genet Sel Evol · 2023
L2
100/100
Shifts from cooperative to individual-based predation defense determine microbial predator-prey dynamics.
PMID 36854789 · ISME J · 2023
L1
84/100
Enteroendocrine cell lineages that differentially control feeding and gut motility.
PMID 36810133 · Elife · 2023
L1
88/100
Identification of genes influencing the evolution of Escherichia coli ST372 in dogs and humans.
PMID 36752777 · Microb Genom · 2023
L1
89/100
A step forward for Shiga toxin-producing Escherichia coli identification and characterization in raw milk using long-read metagenomics.
PMID 36748417 · Microb Genom · 2022
L1
75/100
nf-core/circrna: a portable workflow for the quantification, miRNA target prediction and differential expression analysis of circular RNAs.
PMID 36694127 · BMC Bioinformatics · 2023
L1
76/100
Genomic insight into the influence of selection, crossbreeding, and geography on population structure in poultry.
PMID 36670351 · Genet Sel Evol · 2023
L1
100/100
Critical Role for the Human Cytomegalovirus Major Immediate Early Proteins in Recruitment of RNA Polymerase II and H3K27Ac To an Enhancer-Like Element in Ori
PMID 36645269 · Microbiol Spectr · 2023
93/100
A network-guided protocol to discover susceptibility genes in genome-wide association studies using stability selection.
PMID 36609152 · STAR Protoc · 2023
L1
92/100
LMAS: evaluating metagenomic short de novo assembly methods through defined communities.
PMID 36576131 · Gigascience · 2022
L1
86/100
Disentangling the causal relationship between rabbit growth and cecal microbiota through structural equation models.
PMID 36536288 · Genet Sel Evol · 2022
L1
93/100
Characterization of protein isoform diversity in human umbilical vein endothelial cells via long-read proteogenomics.
PMID 36457147 · RNA Biol · 2022
L1
93/100
MirDIP 5.2: tissue context annotation and novel microRNA curation.
PMID 36453996 · Nucleic Acids Res · 2023
L1
89/100
Optimisation of the core subset for the APY approximation of genomic relationships.
PMID 36418945 · Genet Sel Evol · 2022
L1
85/100
Genetic Variants in ARHGEF6 Cause Congenital Anomalies of the Kidneys and Urinary Tract in Humans, Mice, and Frogs.
PMID 36414417 · · 2023
L1
85/100
What the Phage: a scalable workflow for the identification and analysis of phage sequences.
PMID 36399058 · Gigascience · 2022
L1
76/100
MetaGT: A pipeline for de novo assembly of metatranscriptomes with the aid of metagenomic data.
PMID 36386613 · Front Microbiol · 2022
L1
83/100
Wochenende - modular and flexible alignment-based shotgun metagenome analysis.
PMID 36368923 · BMC Genomics · 2022
L1
88/100
An integrated in silico-in vitro approach for identifying therapeutic targets against osteoarthritis.
PMID 36352408 · BMC Biol · 2022
L1
84/100
Spatially resolved phosphoproteomics reveals fibroblast growth factor receptor recycling-driven regulation of autophagy and survival.
PMID 36329028 · Nat Commun · 2022
L1
87/100
RetroSnake: A modular pipeline to detect human endogenous retroviruses in genome sequencing data.
PMID 36339261 · iScience · 2022
L1
79/100
CIRCprimerXL: Convenient and High-Throughput PCR Primer Design for Circular RNA Quantification.
PMID 36304334 · Front Bioinform · 2022
L1
88/100
Structure of a mitochondrial ribosome with fragmented rRNA in complex with membrane-targeting elements.
PMID 36253367 · Nat Commun · 2022
L1
100/100
Lipopolysaccharide distinctively alters human microglia transcriptomes to resemble microglia from Alzheimer's disease mouse models.
PMID 36254682 · Dis Model Mech · 2022
L1
100/100
OSeMOSYS Global, an open-source, open data global electricity system model generator.
PMID 36241673 · Sci Data · 2022
L1
80/100
Systematic assessment of pathway databases, based on a diverse collection of user-submitted experiments.
PMID 36088548 · Brief Bioinform · 2022
L1
94/100
Assessment of genotyping array performance for genome-wide association studies and imputation in African cattle.
PMID 36057548 · Genet Sel Evol · 2022
L1
90/100
Comparative genomics of dairy-associated Staphylococcus aureus from selected sub-Saharan African regions reveals milk as reservoir for human-and animal-d
PMID 36046020 · Front Microbiol · 2022
L1
89/100
Spatial patterns of benthic biofilm diversity among streams draining proglacial floodplains.
PMID 36003939 · Front Microbiol · 2022
95/100
Towards reliable whole genome sequencing for outbreak preparedness and response.
PMID 35945497 · BMC Genomics · 2022
L1
84/100
Clinical and pathological characteristics of familial melanoma with germline <scp>TERT</scp> promoter variants
PMID 35912549 · · 2022
L1
No computation
Global and precise identification of functional miRNA targets in mESCs by integrative analysis.
PMID 35899551 · EMBO Rep · 2022
L1
93/100
Genomic regions and candidate genes selected during the breeding of rice in Vietnam.
PMID 35899250 · Evol Appl · 2022
L1
75/100
Sox8 remodels the cranial ectoderm to generate the ear.
PMID 35867760 · Proc Natl Acad Sci U S A · 2022
L1
100/100
Systematic Analysis of Long Non-Coding RNA Genes in Nonalcoholic Fatty Liver Disease.
PMID 35893239 · Noncoding RNA · 2022
L1
85/100
Main Factors Influencing the Gut Microbiota of Datong Yaks in Mixed Group.
PMID 35883324 · Animals (Basel) · 2022
L1
84/100