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303 matching publication(s)
Ancient variation of the AvrPm17 gene in powdery mildew limits the effectiveness of the introgressed rye Pm17 resistance g
PMID 35857869 · Proc Natl Acad Sci U S A · 2022
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Prediction of Antibiotic Susceptibility Profiles of Vibrio cholerae Isolates From Whole Genome Illumina and Nanopore Sequencing Data: CholerAegon.
PMID 35814690 · Front Microbiol · 2022
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Analysis of the Hypoxic Response in a Mouse Cortical Collecting Duct-Derived Cell Line Suggests That Esrra Is Partially Involved in Hif1α-Mediated Hypoxia-Induc
PMID 35806266 · Int J Mol Sci · 2022
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getSequenceInfo: a suite of tools allowing to get genome sequence information from public repositories.
PMID 35804320 · BMC Bioinformatics · 2022
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Deep learning from phylogenies to uncover the epidemiological dynamics of outbreaks.
PMID 35794110 · Nat Commun · 2022
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Extensive transgressive gene expression in testis but not ovary in the homoploid hybrid Italian sparrow.
PMID 35726533 · Mol Ecol · 2022
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Antibiotic Drug screening and Image Characterization Toolbox (A.D.I.C.T.): a robust imaging workflow to monitor antibiotic stress response in bacterial cells <i
PMID 35707454 · F1000Res · 2021
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Transcriptional regulation and chromatin architecture maintenance are decoupled functions at the Sox2 locus.
PMID 35710138 · Genes Dev · 2022
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BaRTv2: a highly resolved barley reference transcriptome for accurate transcript-specific RNA-seq quantification.
PMID 35704392 · Plant J · 2022
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Utility of Triti-Map for bulk-segregated mapping of causal genes and regulatory elements in Triticeae.
PMID 35605195 · Plant Commun · 2022
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A Decentralized Kidney Transplant Biopsy Classifier for Transplant Rejection Developed Using Genes of the Banff-Human Organ Transplant Panel.
PMID 35619722 · Front Immunol · 2022
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Improving recombinant protein production by yeast through genome-scale modeling using proteome constraints.
PMID 35624178 · Nat Commun · 2022
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A bioinformatic pipeline for simulating viral integration data.
PMID 35496474 · Data Brief · 2022
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Long-Read RNA Sequencing Identifies Polyadenylation Elongation and Differential Transcript Usage of Host Transcripts During SARS-CoV-2 In Vitro Infection
PMID 35464437 · Front Immunol · 2022
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Transcriptomic Data Meta-Analysis Sheds Light on High Light Response in Arabidopsis thaliana L.
PMID 35457273 · Int J Mol Sci · 2022
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Genome and cuticular hydrocarbon-based species delimitation shed light on potential drivers of speciation in a Neotropical ant species complex.
PMID 35342602 · Ecol Evol · 2022
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PowerBacGWAS: a computational pipeline to perform power calculations for bacterial genome-wide association studies.
PMID 35338232 · Commun Biol · 2022
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Severe COVID-19 Shares a Common Neutrophil Activation Signature with Other Acute Inflammatory States.
PMID 35269470 · Cells · 2022
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Expanding the clinical spectrum of COL2A1 related disorders by a mass like phenotype.
PMID 35296718 · · 2022
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Mucospheres produced by a mixotrophic protist impact ocean carbon cycling.
PMID 35288549 · Nat Commun · 2022
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Accurate prediction of metagenome-assembled genome completeness by MAGISTA, a random forest model built on alignment-free intra-bin statistics.
PMID 35248155 · Environ Microbiome · 2022
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Enhanced protein isoform characterization through long-read proteogenomics.
PMID 35241129 · Genome Biol · 2022
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Identification of phenotype-specific networks from paired gene expression-cell shape imaging data.
PMID 35197309 · Genome Res · 2022
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Topological approximate Bayesian computation for parameter inference of an angiogenesis model.
PMID 35191485 · Bioinformatics · 2022
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Chemical reversible crosslinking enables measurement of RNA 3D distances and alternative conformations in cells.
PMID 35177610 · Nat Commun · 2022
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Large-scale quality assessment of prokaryotic genomes with metashot/prok-quality.
PMID 35136576 · F1000Res · 2021
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A role for ColV plasmids in the evolution of pathogenic Escherichia coli ST58.
PMID 35115531 · Nat Commun · 2022
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ddRAD-seq reveals the genetic structure and detects signals of selection in Italian brown trout.
PMID 35100964 · Genet Sel Evol · 2022
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An accurate method for identifying recent recombinants from unaligned sequences.
PMID 35025988 · Bioinformatics · 2022
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Stage-stratified molecular profiling of non-muscle-invasive bladder cancer enhances biological, clinical, and therapeutic insight.
PMID 35028613 · Cell Rep Med · 2021
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Itaconate and derivatives reduce interferon responses and inflammation in influenza A virus infection.
PMID 35025971 · PLoS Pathog · 2022
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The formation of avian montane diversity across barriers and along elevational gradients.
PMID 35022441 · Nat Commun · 2022
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Reactive astrocytes acquire neuroprotective as well as deleterious signatures in response to Tau and Aß pathology.
PMID 35013236 · Nat Commun · 2022
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Assessing Bos taurus introgression in the UOA Bos indicus assembly.
PMID 34922445 · Genet Sel Evol · 2021
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An integrative proteomics method identifies a regulator of translation during stem cell maintenance and differentiation.
PMID 34772928 · Nat Commun · 2021
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A whole genome duplication drives the genome evolution of Phytophthora betacei, a closely related species to Phytophthora infestans.
PMID 34740326 · BMC Genomics · 2021
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Disrupted PGR-B and ESR1 signaling underlies defective decidualization linked to severe preeclampsia.
PMID 34709177 · Elife · 2021
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FA-nf: A Functional Annotation Pipeline for Proteins from Non-Model Organisms Implemented in Nextflow.
PMID 34681040 · Genes (Basel) · 2021
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A Deeper Insight into Evolutionary Patterns and Phylogenetic History of ASFV Epidemics in Sardinia (Italy) through Extensive Genomic Sequencing.
PMID 34696424 · Viruses · 2021
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Graph-Based Approaches Significantly Improve the Recovery of Antibiotic Resistance Genes From Complex Metagenomic Datasets.
PMID 34690959 · Front Microbiol · 2021
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Systems Analysis Reveals Ageing-Related Perturbations in Retinoids and Sex Hormones in Alzheimer's and Parkinson's Diseases.
PMID 34680427 · Biomedicines · 2021
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Chromosome-Scale Assembly of the Complete Genome Sequence of Porcisia hertigi, Isolate C119, Strain LV43.
PMID 34647802 · Microbiol Resour Announc · 2021
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Evolutionary Genomics of Sex-Related Chromosomes at the Base of the Green Lineage.
PMID 34599324 · Genome Biol Evol · 2021
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Differentially expressed genes reflect disease-induced rather than disease-causing changes in the transcriptome.
PMID 34561431 · Nat Commun · 2021
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A chromosome-scale genome assembly and karyotype of the ctenophore Hormiphora californensis.
PMID 34545398 · G3 (Bethesda) · 2021
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Chromosome-Scale Assembly of the Complete Genome Sequence of Leishmania (Mundinia) orientalis, Isolate LSCM4, Strain LV768.
PMID 34498920 · Microbiol Resour Announc · 2021
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