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51 matching publication(s)
Genomic analysis of bacteria in the Acute Oak Decline pathobiome.
PMID 30625111 · Microb Genom · 2019
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Complete human day 14 post-implantation embryo models from naive ES cells.
PMID 37673118 · Nature · 2023
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Enteroendocrine cell lineages that differentially control feeding and gut motility.
PMID 36810133 · Elife · 2023
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Severe COVID-19 Shares a Common Neutrophil Activation Signature with Other Acute Inflammatory States.
PMID 35269470 · Cells · 2022
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Mucospheres produced by a mixotrophic protist impact ocean carbon cycling.
PMID 35288549 · Nat Commun · 2022
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Stage-stratified molecular profiling of non-muscle-invasive bladder cancer enhances biological, clinical, and therapeutic insight.
PMID 35028613 · Cell Rep Med · 2021
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Lamin C is required to establish genome organization after mitosis.
PMID 34775987 · Genome Biol · 2021
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Pathway signatures derived from on-treatment tumor specimens predict response to anti-PD1 blockade in metastatic melanoma.
PMID 34654806 · Nat Commun · 2021
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Differentially expressed genes reflect disease-induced rather than disease-causing changes in the transcriptome.
PMID 34561431 · Nat Commun · 2021
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Reactivation of a developmentally silenced embryonic globin gene.
PMID 34290235 · Nat Commun · 2021
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TGF-β-dependent reprogramming of amino acid metabolism induces epithelial-mesenchymal transition in non-small cell lung cancers.
PMID 34168290 · Commun Biol · 2021
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A single cell characterisation of human embryogenesis identifies pluripotency transitions and putative anterior hypoblast centre.
PMID 34140473 · Nat Commun · 2021
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Vaccine-induced ICOS+CD38+ circulating Tfh are sensitive biosensors of age-related changes in inflammatory pathway
PMID 34095875 · Cell Rep Med · 2021
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Mammary cell gene expression atlas links epithelial cell remodeling events to breast carcinogenesis.
PMID 34079055 · Commun Biol · 2021
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eVITTA: a web-based visualization and inference toolbox for transcriptome analysis.
PMID 34019643 · Nucleic Acids Res · 2021
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Generic injuries are sufficient to induce ectopic Wnt organizers in Hydra.
PMID 33779545 · Elife · 2021
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Topological signatures in regulatory network enable phenotypic heterogeneity in small cell lung cancer.
PMID 33729159 · Elife · 2021
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Curation of over 10 000 transcriptomic studies to enable data reuse.
PMID 33599246 · Database (Oxford) · 2021
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Expression quantitative trait loci in sheep liver and muscle contribute to variations in meat traits.
PMID 33461502 · Genet Sel Evol · 2021
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An Erg-driven transcriptional program controls B cell lymphopoiesis.
PMID 32541654 · Nat Commun · 2020
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Prediction of Antimicrobial Resistance in Gram-Negative Bacteria From Whole-Genome Sequencing Data.
PMID 32528441 · Front Microbiol · 2020
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Cohesion is established during DNA replication utilising chromosome associated cohesin rings as well as those loaded de novo onto nascent DNAs.
PMID 32515737 · Elife · 2020
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Stem rust resistance in wheat is suppressed by a subunit of the mediator complex.
PMID 32111840 · Nat Commun · 2020
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A reference profile-free deconvolution method to infer cancer cell-intrinsic subtypes and tumor-type-specific stromal profiles.
PMID 32111252 · Genome Med · 2020
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Scalable Prediction of Acute Myeloid Leukemia Using High-Dimensional Machine Learning and Blood Transcriptomics.
PMID 31918046 · iScience · 2019
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The evolution of sexual signaling is linked to odorant receptor tuning in perfume-collecting orchid bees.
PMID 31932598 · Nat Commun · 2020
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From bud formation to flowering: transcriptomic state defines the cherry developmental phases of sweet cherry bud dormancy.
PMID 31830909 · BMC Genomics · 2019
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Electron Energy Partition across Interplanetary Shocks. I. Methodology and Data Product.
PMID 31806920 · Astrophys J Suppl Ser · 2019
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mitoXplorer, a visual data mining platform to systematically analyze and visualize mitochondrial expression dynamics and mutations.
PMID 31799603 · Nucleic Acids Res · 2020
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Contribution of retrotransposition to developmental disorders.
PMID 31604926 · Nat Commun · 2019
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Dynamic reversal of random X-Chromosome inactivation during iPSC reprogramming.
PMID 31515287 · Genome Res · 2019
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Spatially clustered loci with multiple enhancers are frequent targets of HIV-1 integration.
PMID 31492853 · Nat Commun · 2019
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pysradb: A Python package to query next-generation sequencing metadata and data from NCBI Sequence Read Archive.
PMID 31114675 · F1000Res · 2019
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pwrEWAS: a user-friendly tool for comprehensive power estimation for epigenome wide association studies (EWAS).
PMID 31035919 · BMC Bioinformatics · 2019
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Widespread nitrous oxide undersaturation in farm waterbodies creates an unexpected greenhouse gas sink.
PMID 31036633 · Proc Natl Acad Sci U S A · 2019
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A genome-wide association analysis identifies 16 novel susceptibility loci for carpal tunnel syndrome.
PMID 30833571 · Nat Commun · 2019
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The exonuclease Xrn1 activates transcription and translation of mRNAs encoding membrane proteins.
PMID 30899024 · Nat Commun · 2019
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Insights into the Evolution of the New World Diploid Cottons (Gossypium, Subgenus Houzingenia) Based on Genome Sequencing.
PMID 30476109 · Genome Biol Evol · 2019
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Firefly genomes illuminate parallel origins of bioluminescence in beetles.
PMID 30324905 · Elife · 2018
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miRge 2.0 for comprehensive analysis of microRNA sequencing data.
PMID 30153801 · BMC Bioinformatics · 2018
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Expansion of the SOS regulon of Vibrio cholerae through extensive transcriptome analysis and experimental validation.
PMID 29783948 · BMC Genomics · 2018
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The Cohesin Ring Uses Its Hinge to Organize DNA Using Non-topological as well as Topological Mechanisms.
PMID 29754816 · Cell · 2018
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Verrucomicrobia are prevalent in north-temperate freshwater lakes and display class-level preferences between lake habitats.
PMID 29590198 · PLoS One · 2018
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Single-cell transcriptional dynamics of flavivirus infection.
PMID 29451494 · Elife · 2018
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Viral Diagnostics in Plants Using Next Generation Sequencing: Computational Analysis in Practice.
PMID 29123534 · Front Plant Sci · 2017
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Genome-wide identification of conserved and novel microRNAs in one bud and two tender leaves of tea plant (Camellia sinensis) by small RNA sequencing, microarra
PMID 29157210 · BMC Plant Biol · 2017
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Genome-wide prediction of DNase I hypersensitivity using gene expression.
PMID 29051481 · Nat Commun · 2017
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Large-Scale Phylogenomics of the Lactobacillus casei Group Highlights Taxonomic Inconsistencies and Reveals Novel Clade-Associated Features.
PMID 28845461 · mSystems · 2017
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