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199 matching publication(s)
Comprehensive Transcriptome Analysis Reveals Genome-Wide Changes Associated with Endoplasmic Reticulum (ER) Stress in Potato (Solanum tuberosum L.).
PMID 36430273 · Int J Mol Sci · 2022
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N6-methyladenosine (m6A) reader Pho92 is recruited co-transcriptionally and couples translation to mRNA decay to promote meiotic fitness in y⚑
PMID 36422864 · Elife · 2022
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CHD7 regulates otic lineage specification and hair cell differentiation in human inner ear organoids.
PMID 36396635 · Nat Commun · 2022
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Genetic architecture of natural variation of cardiac performance from flies to humans.
PMID 36383075 · Elife · 2022
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Single-cell transcriptomics identifies Keap1-Nrf2 regulated collective invasion in a Drosophila tumor model.
PMID 36321803 · Elife · 2022
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Stromal androgen signaling acts as tumor niches to drive prostatic basal epithelial progenitor-initiated oncogenesis.⚑
PMID 36323713 · Nat Commun · 2022
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spliceJAC: transition genes and state-specific gene regulation from single-cell transcriptome data.⚑
PMID 36321549 · Mol Syst Biol · 2022
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CASK loss of function differentially regulates neuronal maturation and synaptic function in human induced cortical excitatory neurons.
PMID 36262316 · iScience · 2022
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The third international hackathon for applying insights into large-scale genomic composition to use cases in a wide range of organisms.
PMID 36262335 · F1000Res · 2022
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Effects of replication domains on genome-wide UV-induced DNA damage and repair.
PMID 36155646 · PLoS Genet · 2022
74/100
Estimating biodiversity across the tree of life on Mount Everest's southern flank with environmental DNA.
PMID 36148432 · iScience · 2022
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A feed-forward pathway drives LRRK2 kinase membrane recruitment and activation.
PMID 36149401 · Elife · 2022
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Transcriptomics, regulatory syntax, and enhancer identification in mesoderm-induced ESCs at single-cell resolution.⚑
PMID 35977485 · Cell Rep · 2022
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Dioxin-elicited decrease in cobalamin redirects propionyl-CoA metabolism to the β-oxidation-like pathway resulting in acrylyl-CoA conjugate buildup.
PMID 35931118 · J Biol Chem · 2022
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Tourmaline: A containerized workflow for rapid and iterable amplicon sequence analysis using QIIME 2 and Snakemake.⚑
PMID 35902092 · Gigascience · 2022
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Gene module regulation in dilated cardiomyopathy and the role of Na/K-ATPase.⚑
PMID 35901050 · PLoS One · 2022
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Genome-wide DNA hypermethylation opposes healing in patients with chronic wounds by impairing epithelial-mesenchymal transition.⚑
PMID 35819852 · J Clin Invest · 2022
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Apoptotic brown adipocytes enhance energy expenditure via extracellular inosine
PMID 35790189 · · 2022
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A hybrid empirical and parametric approach for managing ecosystem complexity: Water quality in Lake Geneva under nonstationary futures.
PMID 35733249 · Proc Natl Acad Sci U S A · 2022
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RegulonDB 11.0: Comprehensive high-throughput datasets on transcriptional regulation in Escherichia coli K-12.⚑
PMID 35584008 · Microb Genom · 2022
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Multi-scale integrative analyses identify THBS2+ cancer-associated fibroblasts as a key orchestrator promoting aggressiveness in early-stage lung ade
PMID 35547750 · Theranostics · 2022
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GEMmaker: process massive RNA-seq datasets on heterogeneous computational infrastructure.
PMID 35501696 · BMC Bioinformatics · 2022
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Environment and Co-occurring Native Mussel Species, but Not Host Genetics, Impact the Microbiome of a Freshwater Invasive Species (Corbicula fluminea).
PMID 35444631 · Front Microbiol · 2022
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Horizontal transmission enables flexible associations with locally adapted symbiont strains in deep-sea hydrothermal vent symbioses.
PMID 35349333 · Proc Natl Acad Sci U S A · 2022
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Harnessing secretory pathway differences between HEK293 and CHO to rescue production of difficult to express proteins.
PMID 35301123 · Metab Eng · 2022
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Arabidopsis RBV is a conserved WD40 repeat protein that promotes microRNA biogenesis and ARGONAUTE1 loading.
PMID 35260568 · Nat Commun · 2022
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Profiling Selective Packaging of Host RNA and Viral RNA Modification in SARS-CoV-2 Viral Preparations.
PMID 35186917 · Front Cell Dev Biol · 2022
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TC-hunter: identification of the insertion site of a transgenic gene within the host genome.
PMID 35184734 · BMC Genomics · 2022
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Temporal trends in methane emissions from a small eutrophic reservoir: the key role of a spring burst.
PMID 35126532 · Biogeosciences · 2021
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Downstream high-speed plasma jet generation as a direct consequence of shock reformation.
PMID 35105885 · Nat Commun · 2022
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GAL08, an Uncultivated Group of Acidobacteria, Is a Dominant Bacterial Clade in a Neutral Hot Spring.
PMID 35087491 · Front Microbiol · 2022
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Comprehensive characterization of the antibody responses to SARS-CoV-2 Spike protein finds additional vaccine-induced epitopes beyond those for mild infection.⚑
PMID 35072628 · Elife · 2022
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Comparative Genomics of Borderline Oxacillin-Resistant Staphylococcus aureus Detected during a Pseudo-outbreak of Methicillin-Resistant S. aureus in a Neonatal
PMID 35038924 · mBio · 2022
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Systematic identification of ACE2 expression modulators reveals cardiomyopathy as a risk factor for mortality in COVID-19 patients.
PMID 35012625 · Genome Biol · 2022
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Preparation of mouse pancreatic tumor for single-cell RNA sequencing and analysis of the data.
PMID 34927097 · STAR Protoc · 2021
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Analysis of subcellular transcriptomes by RNA proximity labeling with Halo-seq.
PMID 34875090 · Nucleic Acids Res · 2022
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Target identification for repurposed drugs active against SARS-CoV-2 via high-throughput inverse docking.
PMID 34825285 · J Comput Aided Mol Des · 2021
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EpiDiverse Toolkit: a pipeline suite for the analysis of bisulfite sequencing data in ecological plant epigenetics.⚑
PMID 34805989 · NAR Genom Bioinform · 2021
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Loss of mutual protection between human osteoclasts and chondrocytes in damaged joints initiates osteoclast-mediated cartilage degradation by MMPs.
PMID 34811438 · Sci Rep · 2021
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Phase transition specified by a binary code patterns the vertebrate eye cup.
PMID 34757798 · Sci Adv · 2021
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Design considerations for workflow management systems use in production genomics research and the clinic.
PMID 34737383 · Sci Rep · 2021
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Reverse Engineering of the Pediatric Sepsis Regulatory Network and Identification of Master Regulators.
PMID 34680414 · Biomedicines · 2021
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Monocarboxylate Transporter-2 Expression Restricts Tumor Growth in a Murine Model of Lung Cancer: A Multi-Omic Analysis.⚑
PMID 34638954 · Int J Mol Sci · 2021
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Effect of elevation, season and accelerated snowmelt on biogeochemical processes during isolated conifer needle litter decomposition.
PMID 34434657 · PeerJ · 2021
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Gene Set Enrichment Analysis Reveals Individual Variability in Host Responses in Tuberculosis Patients.
PMID 34421903 · Front Immunol · 2021
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A ChIP-exo screen of 887 Protein Capture Reagents Program transcription factor antibodies in human cells.
PMID 34426512 · Genome Res · 2021
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Creation of a Single Cell RNASeq Meta-Atlas to Define Human Liver Immune Homeostasis.⚑
PMID 34335581 · Front Immunol · 2021
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Profiling chromatin accessibility responses in human neutrophils with sensitive pathogen detection.⚑
PMID 34145026 · Life Sci Alliance · 2021
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Genomics of Environmental Salmonella: Engaging Students in the Microbiology and Bioinformatics of Foodborne Pathogens.
PMID 33967968 · Front Microbiol · 2021
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