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571 matching publication(s)
Ancient gene duplicates in Gossypium (cotton) exhibit near-complete expression divergence.
PMID 24558256 · Genome Biol Evol · 2014
50/100
Requirements for Pseudomonas aeruginosa acute burn and chronic surgical wound infection.
PMID 25057820 · PLoS Genet · 2014
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78/100
Revised annotations, sex-biased expression, and lineage-specific genes in the Drosophila melanogaster group.⚑
PMID 25273863 · G3 (Bethesda) · 2014
L1
58/100
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TP53 engagement with the genome occurs in distinct local chromatin environments via pioneer factor activity.
PMID 25391375 · Genome Res · 2014
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80/100
Polymorphism identification and improved genome annotation of Brassica rapa through Deep RNA sequencing.
PMID 25122667 · G3 (Bethesda) · 2014
L1
50/100
WikiPathways App for Cytoscape: Making biological pathways amenable to network analysis and visualization.
PMID 25254103 · F1000Res · 2014
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76/100
A target enrichment method for gathering phylogenetic information from hundreds of loci: An example from the Compositae.
PMID 25202605 · Appl Plant Sci · 2014
L1
87/100
Genome-wide identification of Hfq-regulated small RNAs in the fire blight pathogen Erwinia amylovora discovered small RNAs with virulence regulatory function.
PMID 24885615 · BMC Genomics · 2014
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50/100
Comprehensive transcriptome study to develop molecular resources of the copepod Calanus sinicus for their potential ecological applications.⚑
PMID 24982883 · Biomed Res Int · 2014
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61/100
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Genetic analysis of Leishmania donovani tropism using a naturally attenuated cutaneous strain.
PMID 24992200 · PLoS Pathog · 2014
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63/100
RNA-Seq transcriptome profiling identifies CRISPLD2 as a glucocorticoid responsive gene that modulates cytokine function in airway smooth muscle cells.
PMID 24926665 · PLoS One · 2014
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87/100
Comparison of RNA-Seq by poly (A) capture, ribosomal RNA depletion, and DNA microarray for expression profiling.
PMID 24888378 · BMC Genomics · 2014
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77/100
Minimal metabolic pathway structure is consistent with associated biomolecular interactions.
PMID 24987116 · Mol Syst Biol · 2014
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30/100
TEMP: a computational method for analyzing transposable element polymorphism in populations.
PMID 24753423 · Nucleic Acids Res · 2014
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61/100
Nucleosome regulatory dynamics in response to TGFβ.
PMID 24771338 · Nucleic Acids Res · 2014
L1
59/100
Metatranscriptomics of the human oral microbiome during health and disease.
PMID 24692635 · mBio · 2014
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62/100
The Li2 mutation results in reduced subgenome expression bias in elongating fibers of allotetraploid cotton (Gossypium hirsutum L.).
PMID 24598808 · PLoS One · 2014
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58/100
Rbfox2 controls autoregulation in RNA-binding protein networks.⚑
PMID 24637117 · Genes Dev · 2014
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48/100
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Polyploidy and the petal transcriptome of Gossypium.
PMID 24393201 · BMC Plant Biol · 2014
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51/100
PrimerSeq: Design and visualization of RT-PCR primers for alternative splicing using RNA-seq data.
PMID 24747190 · Genomics Proteomics Bioinformatics · 2014
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90/100
Transcriptome analysis reveals differential splicing events in IPF lung tissue.
PMID 24647608 · PLoS One · 2014
L1
81/100
The electrostatic profile of consecutive Cβ atoms applied to protein structure quality assessment.⚑
PMID 25506420 · F1000Res · 2013
L1
42/100
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Irisin ameliorates obesity and insulin resistance via adipose tissue IL-33 and regulatory T cells.
PMID 41933175 · Nature metabolism · 2026
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48/100
Vespucci: a system for building annotated databases of nascent transcripts.
PMID 24304890 · Nucleic Acids Res · 2013
L1
73/100
Protein structure quality assessment based on the distance profiles of consecutive backbone Cα atoms.
PMID 24555103 · F1000Res · 2013
L1
71/100
Aberration in DNA methylation in B-cell lymphomas has a complex origin and increases with disease severity.
PMID 23326238 · PLoS Genet · 2013
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49/100
Using random walks to identify cancer-associated modules in expression data.⚑
PMID 24128261 · BioData Min · 2013
not yet assessed
Ordinal-level phylogenomics of the arthropod class Diplopoda (millipedes) based on an analysis of 221 nuclear protein-coding loci generated using next-generatio
PMID 24236165 · PLoS One · 2013
L1
82/100
Sequencing mRNA from cryo-sliced Drosophila embryos to determine genome-wide spatial patterns of gene expression.
PMID 23951250 · PLoS One · 2013
L1
67/100
Compression of structured high-throughput sequencing data.⚑
PMID 24260313 · PLoS One · 2013
L1
43/100
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A comparison across non-model animals suggests an optimal sequencing depth for de novo transcriptome assembly.
PMID 23496952 · BMC Genomics · 2013
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69/100
The genome and development-dependent transcriptomes of Pyronema confluens: a window into fungal evolution.
PMID 24068976 · PLoS Genet · 2013
L1
76/100
Insights into the evolution of cotton diploids and polyploids from whole-genome re-sequencing.
PMID 23979935 · G3 (Bethesda) · 2013
L1
91/100
A global change in RNA polymerase II pausing during the Drosophila midblastula transition.
PMID 23951546 · Elife · 2013
L1
71/100
Detecting DNA modifications from SMRT sequencing data by modeling sequence context dependence of polymerase kinetic.⚑
PMID 23516341 · PLoS Comput Biol · 2013
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44/100
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An extensive evaluation of read trimming effects on Illumina NGS data analysis.
PMID 24376861 · PLoS One · 2013
L1
85/100
RNA-Seq transcriptome profiling of upland cotton (Gossypium hirsutum L.) root tissue under water-deficit stress.⚑
PMID 24324815 · PLoS One · 2013
L1
38/100
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FusionQ: a novel approach for gene fusion detection and quantification from paired-end RNA-Seq.
PMID 23768108 · BMC Bioinformatics · 2013
L1
65/100
RNAseq analysis of the parasitic nematode Strongyloides stercoralis reveals divergent regulation of canonical dauer pathways.
PMID 23145190 · PLoS Negl Trop Dis · 2012
L1
66/100
Free circular introns with an unusual branchpoint in neuronal projections.
PMID 31697236 · Elife · 2019
L1
99/100
Energy, power, and infrastructure demands from electrifying airport ground support equipment at United States airports.
PMID 41912553 · Nat Commun · 2026
L1
95/100
Machine learning reveals microbial interactions driving plastic degradation across plastisphere environments.
PMID 41657981 · Front Microbiol · 2026
L1
87/100
COVID-19 lung disease shares driver AT2 cytopathic features with Idiopathic pulmonary fibrosis.
PMID 35870428 · EBioMedicine · 2022
L1
85/100
Deep transcriptomics reveals cell-specific isoforms of pan-neuronal genes.
PMID 40379625 · Nat Commun · 2025
L1
84/100
Contrasting nutrient retention in alpine soils: the role of soil microbiome in phosphorus and nitrogen mobility in scree and meadow environments.
PMID 41632073 · FEMS Microbiol Ecol · 2026
L1
63/100
The TREM2-APOE Pathway Drives the Transcriptional Phenotype of Dysfunctional Microglia in Neurodegenerative Diseases.
PMID 28930663 · Immunity · 2017
L1
67/100
TRIM28 repression of retrotransposon-based enhancers is necessary to preserve transcriptional dynamics in embryonic stem cells.
PMID 23233547 · Genome Res · 2012
L1
78/100