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52 matching publication(s)
WikiPathways App for Cytoscape: Making biological pathways amenable to network analysis and visualization.
PMID 25254103 · F1000Res · 2014
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76/100
Genomic and transcriptomic plasticity in treatment-naive ovarian cancer.
PMID 24221193 · Genome Res · 2013
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30/100
Bisulfite sequencing of chromatin immunoprecipitated DNA (BisChIP-seq) directly informs methylation status of histone-modified DNA.
PMID 22466171 · Genome Res · 2012
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80/100
An integrated single-cell and spatial proteotranscriptomics atlas of fibroblast-driven immunoregulation within the human adult oral cavity.
PMID 42147490 · Cell Press Blue · 2026
85/100
A conserved glycan motif induces broadly reactive functional antibodies against the zoonotic pathogen Streptococcus suis.
PMID 41880495 · Sci Adv · 2026
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77/100
Accelerating rare disease diagnostics by linking DNA and RNA through an explainable and interactive RNA-guided workflow.
PMID 41685349 · NAR Genom Bioinform · 2026
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No data access
Blood and tissue correlates of steroid non-response in checkpoint inhibition-induced immune-related adverse events.
PMID 41254329 · Commun Med (Lond) · 2025
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71/100
Identification of a PRDM1-regulated T cell network to regulate atherosclerotic plaque inflammation.
PMID 41039608 · Genome Med · 2025
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100/100
A blood-based DNA damage signature in patients with Parkinson's disease is associated with disease progression.
PMID 40913219 · Nat Aging · 2025
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69/100
Improved epigenetic age prediction models by combining sex chromosome and autosomal markers.
PMID 40665390 · Epigenetics Chromatin · 2025
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48/100
A 14-bp motif in the KIT active promoter region is critical for melanin accumulation in yaks, mice, and humans.
PMID 40629379 · BMC Biol · 2025
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54/100
An engineered tumor organoid model reveals cellular identity and signaling trajectories underlying SFPQ-TFE3 driven translocation RCC.
PMID 40463960 · iScience · 2025
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88/100
High performance imputation of structural and single nucleotide variants using low-coverage whole genome sequencing.
PMID 40155798 · Genet Sel Evol · 2025
85/100
NK2R control of energy expenditure and feeding to treat metabolic diseases.
PMID 39537932 · Nature · 2024
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87/100
Integrated drug resistance and leukemic stemness gene-expression scores predict outcomes in large cohort of over 3500 AML patients from 10 trials.
PMID 39090192 · NPJ Precis Oncol · 2024
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50/100
Meta-analysis of six dairy cattle breeds reveals biologically relevant candidate genes for mastitis resistance.⚑
PMID 39009986 · Genet Sel Evol · 2024
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69/100
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Uncertainty in the mating strategy of honeybees causes bias and unreliability in the estimates of genetic parameters.
PMID 38632535 · Genet Sel Evol · 2024
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98/100
Why an integrated view of gene expression studies on hematopoiesis in mouse aging is better than the sum of their parts.
PMID 38627103 · FEBS Lett · 2024
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75/100
The soil microbiome modulates the sorghum root metabolome and cellular traits with a concomitant reduction of Striga infection.
PMID 38537644 · Cell Rep · 2024
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62/100
Mural cell-derived chemokines provide a protective niche to safeguard vascular macrophages and limit chronic inflammation.
PMID 37652021 · Immunity · 2023
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83/100
The Planemo toolkit for developing, deploying, and executing scientific data analyses in Galaxy and beyond.
PMID 36828587 · Genome Res · 2023
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No computation
Genomic insight into the influence of selection, crossbreeding, and geography on population structure in poultry.
PMID 36670351 · Genet Sel Evol · 2023
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100/100
Extensive androgen receptor enhancer heterogeneity in primary prostate cancers underlies transcriptional diversity and metastatic potential.
PMID 36450752 · Nat Commun · 2022
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70/100
N6-methyladenosine (m6A) reader Pho92 is recruited co-transcriptionally and couples translation to mRNA decay to promote meiotic fitness in y⚑
PMID 36422864 · Elife · 2022
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55/100
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An integrated in silico-in vitro approach for identifying therapeutic targets against osteoarthritis.
PMID 36352408 · BMC Biol · 2022
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84/100
Towards reliable whole genome sequencing for outbreak preparedness and response.
PMID 35945497 · BMC Genomics · 2022
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84/100
Main Factors Influencing the Gut Microbiota of Datong Yaks in Mixed Group.
PMID 35883324 · Animals (Basel) · 2022
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84/100
Comparative Metagenomic Analysis of Biosynthetic Diversity across Sponge Microbiomes Highlights Metabolic Novelty, Conservation, and Diversification.
PMID 35862823 · mSystems · 2022
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56/100
Identification of the stress granule transcriptome via RNA-editing in single cells and in vivo.
PMID 35784648 · Cell Rep Methods · 2022
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66/100
Extensive transgressive gene expression in testis but not ovary in the homoploid hybrid Italian sparrow.
PMID 35726533 · Mol Ecol · 2022
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93/100
Transcriptional regulation and chromatin architecture maintenance are decoupled functions at the Sox2 locus.
PMID 35710138 · Genes Dev · 2022
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81/100
A Decentralized Kidney Transplant Biopsy Classifier for Transplant Rejection Developed Using Genes of the Banff-Human Organ Transplant Panel.
PMID 35619722 · Front Immunol · 2022
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90/100
Accurate prediction of metagenome-assembled genome completeness by MAGISTA, a random forest model built on alignment-free intra-bin statistics.
PMID 35248155 · Environ Microbiome · 2022
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83/100
Chemical reversible crosslinking enables measurement of RNA 3D distances and alternative conformations in cells.
PMID 35177610 · Nat Commun · 2022
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84/100
epiGBS2: Improvements and evaluation of highly multiplexed, epiGBS-based reduced representation bisulfite sequencing.⚑
PMID 35178872 · Mol Ecol Resour · 2022
52/100
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A role for ColV plasmids in the evolution of pathogenic Escherichia coli ST58.
PMID 35115531 · Nat Commun · 2022
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95/100
Stage-stratified molecular profiling of non-muscle-invasive bladder cancer enhances biological, clinical, and therapeutic insight.
PMID 35028613 · Cell Rep Med · 2021
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75/100
An integrative proteomics method identifies a regulator of translation during stem cell maintenance and differentiation.
PMID 34772928 · Nat Commun · 2021
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92/100
Design considerations for workflow management systems use in production genomics research and the clinic.
PMID 34737383 · Sci Rep · 2021
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57/100
Blood RNA signature RISK4LEP predicts leprosy years before clinical onset.⚑
PMID 34090257 · EBioMedicine · 2021
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53/100
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Characterization of ALTO-encoding circular RNAs expressed by Merkel cell polyomavirus and trichodysplasia spinulosa polyomavirus.
PMID 33999949 · PLoS Pathog · 2021
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80/100
Fungal metabarcoding data integration framework for the MycoDiversity DataBase (MDDB).
PMID 32463383 · J Integr Bioinform · 2020
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78/100
Automatic discovery of 100-miRNA signature for cancer classification using ensemble feature selection.
PMID 31533612 · BMC Bioinformatics · 2019
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69/100
Spatially clustered loci with multiple enhancers are frequent targets of HIV-1 integration.
PMID 31492853 · Nat Commun · 2019
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77/100
Trans-ethnic association study of blood pressure determinants in over 750,000 individuals.
PMID 30578418 · Nat Genet · 2018
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No data access
Immuno-detection by sequencing enables large-scale high-dimensional phenotyping in cells.
PMID 29921844 · Nat Commun · 2018
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96/100
Cancer cells copy migratory behavior and exchange signaling networks via extracellular vesicles.
PMID 29907695 · EMBO J · 2018
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46/100
Nimbus: a design-driven analyses suite for amplicon-based NGS data.
PMID 29538618 · Bioinformatics · 2018
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64/100