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37 matching publication(s)

Publication	Journal	Year	Score	Verdict
Stage-stratified molecular profiling of non-muscle-invasive bladder cancer enhances biological, clinical, and therapeutic insight. PMID 35028613	Cell Rep Med	2021	75	L1 75/100
snpQT: flexible, reproducible, and comprehensive quality control and imputation of genomic data. ⚑ PMID 34900230	F1000Res	2021	67	L1 67/100 ⚑
RNA modifications detection by comparative Nanopore direct RNA sequencing. PMID 34893601	Nat Commun	2021	50	L1 50/100
Candidates for Balancing Selection in Leishmania donovani Complex Parasites. PMID 34865011	Genome Biol Evol	2021	64	L1 64/100
Defactinib inhibits PYK2 phosphorylation of IRF5 and reduces intestinal inflammation. PMID 34795257	Nat Commun	2021	67	L1 67/100
Loss of mutual protection between human osteoclasts and chondrocytes in damaged joints initiates osteoclast-mediated cartilage degradation by MMPs. PMID 34811438	Sci Rep	2021	50	L1 50/100
Essential Genes of Vibrio anguillarum and Other Vibrio spp. Guide the Development of New Drugs and Vaccines. PMID 34745063	Front Microbiol	2021	67	L1 67/100
Estimates of recent and historical effective population size in turbot, seabream, seabass and carp selective breeding programmes. PMID 34742227	Genet Sel Evol	2021	53	L1 53/100
A Deeper Insight into Evolutionary Patterns and Phylogenetic History of ASFV Epidemics in Sardinia (Italy) through Extensive Genomic Sequencing. PMID 34696424	Viruses	2021	76	L1 76/100
Systems Analysis Reveals Ageing-Related Perturbations in Retinoids and Sex Hormones in Alzheimer's and Parkinson's Diseases. PMID 34680427	Biomedicines	2021	75	L1 75/100
Meta-analysis of COVID-19 single-cell studies confirms eight key immune responses. PMID 34675242	Sci Rep	2021	69	L1 69/100
Chromosome-Scale Assembly of the Complete Genome Sequence of Porcisia hertigi, Isolate C119, Strain LV43. PMID 34647802	Microbiol Resour Announc	2021	88	L1 88/100
Tbx5 drives Aldh1a2 expression to regulate a RA-Hedgehog-Wnt gene regulatory network coordinating cardiopulmonary development. PMID 34643182	Elife	2021	84	L1 84/100
metaGEM: reconstruction of genome scale metabolic models directly from metagenomes. PMID 34614189	Nucleic Acids Res	2021	64	64/100
VGEA: an RNA viral assembly toolkit. PMID 34567846	PeerJ	2021	80	L1 80/100
Differentially expressed genes reflect disease-induced rather than disease-causing changes in the transcriptome. PMID 34561431	Nat Commun	2021	100	L1 100/100
Antigen and checkpoint receptor engagement recalibrates T cell receptor signal strength. ⚑ PMID 34534438	Immunity	2021	37	L1 37/100 ⚑
Chromosome-Scale Assembly of the Complete Genome Sequence of Leishmania (Mundinia) orientalis, Isolate LSCM4, Strain LV768. PMID 34498920	Microbiol Resour Announc	2021	78	L1 78/100
Chromosome-scale genome sequencing, assembly and annotation of six genomes from subfamily Leishmaniinae. PMID 34489462	Sci Data	2021	92	92/100
Chromosome-Scale Assembly of the Complete Genome Sequence of Leishmania (Mundinia) enriettii, Isolate CUR178, Strain LV763. ⚑ PMID 34498918	Microbiol Resour Announc	2021	80	L1 80/100 ⚑
GenTB: A user-friendly genome-based predictor for tuberculosis resistance powered by machine learning. PMID 34461978	Genome Med	2021	78	78/100
Acquisition and loss of CTX-M plasmids in Shigella species associated with MSM transmission in the UK. PMID 34427554	Microb Genom	2021	92	L1 92/100
Genome scans of facial features in East Africans and cross-population comparisons reveal novel associations. PMID 34411106	PLoS Genet	2021	—	L1 No data access
Projecting contact matrices in 177 geographical regions: An update and comparison with empirical data for the COVID-19 era. PMID 34310590	PLoS Comput Biol	2021	98	L1 98/100
Reactivation of a developmentally silenced embryonic globin gene. PMID 34290235	Nat Commun	2021	85	L1 85/100
A HML6 endogenous retrovirus on chromosome 3 is upregulated in amyotrophic lateral sclerosis motor cortex. PMID 34253796	Sci Rep	2021	84	84/100
MicroPIPE: validating an end-to-end workflow for high-quality complete bacterial genome construction. PMID 34172000	BMC Genomics	2021	74	L1 74/100
A single cell characterisation of human embryogenesis identifies pluripotency transitions and putative anterior hypoblast centre. PMID 34140473	Nat Commun	2021	90	L1 90/100
R2DT is a framework for predicting and visualising RNA secondary structure using templates. PMID 34108470	Nat Commun	2021	87	L1 87/100
Sustainable data analysis with Snakemake. PMID 34035898	F1000Res	2021	71	L1 71/100
Genome-wide insights into population structure and host specificity of Campylobacter jejuni. PMID 33990625	Sci Rep	2021	94	94/100
Competitive binding of STATs to receptor phospho-Tyr motifs accounts for altered cytokine responses. PMID 33871355	Elife	2021	89	L1 89/100
In vivo structural characterization of the SARS-CoV-2 RNA genome identifies host proteins vulnerable to repurposed drugs. PMID 33636127	Cell	2021	95	L1 95/100
Potentially bioavailable iron produced through benthic cycling in glaciated Arctic fjords of Svalbard. PMID 33649339	Nat Commun	2021	89	89/100
Using prototyping to choose a bioinformatics workflow management system. PMID 33630841	PLoS Comput Biol	2021	—	L1 No computation
An OMICs-based meta-analysis to support infection state stratification. PMID 33560295	Bioinformatics	2021	44	L1 44/100
Manually curated transcriptomics data collection for toxicogenomic assessment of engineered nanomaterials. PMID 33558569	Sci Data	2021	94	L1 94/100