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14 matching publication(s)

Publication	Journal	Year	Score	Verdict
FusionQ: a novel approach for gene fusion detection and quantification from paired-end RNA-Seq. PMID 23768108	BMC Bioinformatics	2013	65	L1 65/100
Digital sorting of complex tissues for cell type-specific gene expression profiles. PMID 23497278	BMC Bioinformatics	2013	85	L1 85/100
Correcting scale distortion in RNA sequencing data. PMID 39875825	BMC Bioinformatics	2025	76	L1 76/100
SGCP: a spectral self-learning method for clustering genes in co-expression networks. ⚑ PMID 38956463	BMC Bioinformatics	2024	51	L1 51/100 ⚑
Gbdmr: identifying differentially methylated CpG regions in the human genome via generalized beta regressions. ⚑ PMID 38443825	BMC Bioinformatics	2024	62	L1 62/100 ⚑
transXpress: a Snakemake pipeline for streamlined de novo transcriptome assembly and annotation. PMID 37016291	BMC Bioinformatics	2023	95	L1 95/100
Evaluation of taxonomic classification and profiling methods for long-read shotgun metagenomic sequencing datasets. PMID 36513983	BMC Bioinformatics	2022	99	L1 99/100
GEMmaker: process massive RNA-seq datasets on heterogeneous computational infrastructure. PMID 35501696	BMC Bioinformatics	2022	67	L1 67/100
SEAseq: a portable and cloud-based chromatin occupancy analysis suite. PMID 35193506	BMC Bioinformatics	2022	94	L1 94/100
RNAdetector: a free user-friendly stand-alone and cloud-based system for RNA-Seq data analysis. PMID 34082707	BMC Bioinformatics	2021	85	L1 85/100
SPEAQeasy: a scalable pipeline for expression analysis and quantification for R/bioconductor-powered RNA-seq analyses. PMID 33932985	BMC Bioinformatics	2021	65	L1 65/100
pwrEWAS: a user-friendly tool for comprehensive power estimation for epigenome wide association studies (EWAS). PMID 31035919	BMC Bioinformatics	2019	88	L1 88/100
miRge 2.0 for comprehensive analysis of microRNA sequencing data. PMID 30153801	BMC Bioinformatics	2018	89	L1 89/100
A robust data scaling algorithm to improve classification accuracies in biomedical data. PMID 27612635	BMC Bioinformatics	2016	87	87/100