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86 matching publication(s)

Publication	Journal	Year	Score	Verdict
Automatic discovery of 100-miRNA signature for cancer classification using ensemble feature selection. PMID 31533612	BMC Bioinformatics	2019	69	L1 69/100
Spatially clustered loci with multiple enhancers are frequent targets of HIV-1 integration. PMID 31492853	Nat Commun	2019	77	L1 77/100
SMAC, a computational system to link literature, biomedical and expression data. PMID 31324861	Sci Rep	2019	50	L1 50/100
Sister DNA Entrapment between Juxtaposed Smc Heads and Kleisin of the Cohesin Complex. PMID 31201089	Mol Cell	2019	64	L1 64/100
pysradb: A Python package to query next-generation sequencing metadata and data from NCBI Sequence Read Archive. PMID 31114675	F1000Res	2019	90	L1 90/100
sRNAbench and sRNAtoolbox 2019: intuitive fast small RNA profiling and differential expression. PMID 31114926	Nucleic Acids Res	2019	—	not yet assessed
pwrEWAS: a user-friendly tool for comprehensive power estimation for epigenome wide association studies (EWAS). PMID 31035919	BMC Bioinformatics	2019	88	L1 88/100
Widespread nitrous oxide undersaturation in farm waterbodies creates an unexpected greenhouse gas sink. PMID 31036633	Proc Natl Acad Sci U S A	2019	87	L1 87/100
Accurate sequence variant genotyping in cattle using variation-aware genome graphs. ⚑ PMID 31092189	Genet Sel Evol	2019	45	L1 45/100 ⚑
Sequencing of human genomes with nanopore technology. PMID 31015479	Nat Commun	2019	75	L1 75/100
A genome-wide association analysis identifies 16 novel susceptibility loci for carpal tunnel syndrome. PMID 30833571	Nat Commun	2019	90	L1 90/100
The exonuclease Xrn1 activates transcription and translation of mRNAs encoding membrane proteins. PMID 30899024	Nat Commun	2019	85	L1 85/100
Repression of Divergent Noncoding Transcription by a Sequence-Specific Transcription Factor. PMID 30576656	Mol Cell	2018	—	L1 No data access
Insights into the Evolution of the New World Diploid Cottons (Gossypium, Subgenus Houzingenia) Based on Genome Sequencing. PMID 30476109	Genome Biol Evol	2019	87	L1 87/100
Complete Genome Sequencing of Lactobacillus plantarum ZLP001, a Potential Probiotic That Enhances Intestinal Epithelial Barrier Function and Defense Agai PMID 30542296	Front Physiol	2018	68	L1 68/100
Yap1 safeguards mouse embryonic stem cells from excessive apoptosis during differentiation. PMID 30561326	Elife	2018	50	L1 50/100
Single-Cell Sequencing of iPSC-Dopamine Neurons Reconstructs Disease Progression and Identifies HDAC4 as a Regulator of Parkinson Cell Phenotypes. ⚑ PMID 30503143	Cell Stem Cell	2018	30	L1 30/100 ⚑
Firefly genomes illuminate parallel origins of bioluminescence in beetles. PMID 30324905	Elife	2018	93	L1 93/100
miRge 2.0 for comprehensive analysis of microRNA sequencing data. PMID 30153801	BMC Bioinformatics	2018	89	L1 89/100
Expansion of the SOS regulon of Vibrio cholerae through extensive transcriptome analysis and experimental validation. PMID 29783948	BMC Genomics	2018	85	L1 85/100
The Cohesin Ring Uses Its Hinge to Organize DNA Using Non-topological as well as Topological Mechanisms. PMID 29754816	Cell	2018	80	L1 80/100
Verrucomicrobia are prevalent in north-temperate freshwater lakes and display class-level preferences between lake habitats. PMID 29590198	PLoS One	2018	99	L1 99/100
Single-cell transcriptional dynamics of flavivirus infection. PMID 29451494	Elife	2018	90	L1 90/100
Octopus-toolkit: a workflow to automate mining of public epigenomic and transcriptomic next-generation sequencing data. PMID 29420797	Nucleic Acids Res	2018	68	L1 68/100
Easy and efficient ensemble gene set testing with EGSEA. PMID 29333246	F1000Res	2017	97	L1 97/100
Numb prevents a complete epithelial-mesenchymal transition by modulating Notch signalling. PMID 29187638	J R Soc Interface	2017	49	L1 49/100
Viral Diagnostics in Plants Using Next Generation Sequencing: Computational Analysis in Practice. PMID 29123534	Front Plant Sci	2017	100	L1 100/100
Genome-wide identification of conserved and novel microRNAs in one bud and two tender leaves of tea plant (Camellia sinensis) by small RNA sequencing, microarra PMID 29157210	BMC Plant Biol	2017	91	L1 91/100
Genome-wide prediction of DNase I hypersensitivity using gene expression. PMID 29051481	Nat Commun	2017	79	L1 79/100
Large-Scale Phylogenomics of the Lactobacillus casei Group Highlights Taxonomic Inconsistencies and Reveals Novel Clade-Associated Features. PMID 28845461	mSystems	2017	94	L1 94/100
Exposure to the widely used herbicide atrazine results in deregulation of global tissue-specific RNA transcription in the third generation and is associated wit ⚑ PMID 27655631	Nucleic Acids Res	2016	10	L1 10/100 ⚑
Spatial organization shapes the turnover of a bacterial transcriptome. PMID 27198188	Elife	2016	71	L1 71/100
Distinct lncRNA transcriptional fingerprints characterize progressive stages of multiple myeloma. ⚑ PMID 26895470	Oncotarget	2016	36	L1 36/100 ⚑
Phylogenetic analysis of higher-level relationships within Hydroidolina (Cnidaria: Hydrozoa) using mitochondrial genome data and insight into their mitochondria ⚑ PMID 26618080	PeerJ	2015	68	L1 68/100 ⚑
Transcriptome analysis provides insights into the regulatory function of alternative splicing in antiviral immunity in grass carp (Ctenopharyngodon idella). ⚑ PMID 26248502	Sci Rep	2015	70	L1 70/100 ⚑
Cell Specific eQTL Analysis without Sorting Cells. PMID 25955312	PLoS Genet	2015	90	L1 90/100