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46 matching publication(s)

Publication	Journal	Year	Score	Verdict
Quantitative epigenetic co-variation in CpG islands and co-regulation of developmental genes. PMID 23999385	Sci Rep	2013	95	L1 95/100
Wireless sensor network design with reliable and long network lifetime. PMID 41981015	Sci Rep	2026	65	L1 65/100
MiGPC: a comprehensive catalog of enzybiotics from environmental metagenomes. ⚑ PMID 41888223	Sci Rep	2026	24	L1 24/100 ⚑
Prediction, syntax and semantic grounding in the brain and large language models. PMID 41807493	Sci Rep	2026	86	L1 86/100
Integrated multi-omics analysis combined with clinical validation reveals that HLA-DRB5 and ODAPH are causal risk genes for keratoconus. PMID 41803193	Sci Rep	2026	64	L1 64/100
Integrative transcriptomic and machine learning framework reveals candidate genes and potential mechanisms of aflatoxin B1 exposure in breast cancer. PMID 41688730	Sci Rep	2026	83	L1 83/100
Thermophilic and mesophilic sulfate reduction by rare biosphere bacteria in acidic metal-bearing mine wastes from the temperate climate zone. PMID 41345487	Sci Rep	2025	52	L1 52/100
Cell type- and species-specific regulation of hepatic lncRNAs by TCDD-activated aryl hydrocarbon receptor. PMID 41136526	Sci Rep	2025	71	L1 71/100
Metabolic reprogramming and prognostic insights in molecular landscapes driven by glycolysis in ovarian cancer. PMID 40707588	Sci Rep	2025	77	L1 77/100
Integrated bioinformatics analysis screened the key genes and pathways of idiopathic pulmonary fibrosis. PMID 40280949	Sci Rep	2025	93	L1 93/100
Revealing the critical state and identifying individualized dynamic network biomarker for type 2 diabetes through advanced analysis methods on individual basis. PMID 39890881	Sci Rep	2025	75	L1 75/100
Multiomic machine learning on lactylation for molecular typing and prognosis of lung adenocarcinoma. PMID 39856156	Sci Rep	2025	83	L1 83/100
Exploration of the shared diagnostic genes and molecular mechanism between obesity and atherosclerosis via bioinformatic analysis. PMID 39825072	Sci Rep	2025	76	L1 76/100
Identification and validation of a metabolic-related gene risk model predicting the prognosis of lung, colon, and breast cancers. PMID 39779736	Sci Rep	2025	74	L1 74/100
Exploring the prognostic and diagnostic value of lactylation-related genes in sepsis. PMID 39367086	Sci Rep	2024	73	L1 73/100
Identification of the shared hub gene signatures and molecular mechanisms between HIV-1 and pulmonary arterial hypertension. PMID 38528047	Sci Rep	2024	71	L1 71/100
Benefit of using interaction effects for the analysis of high-dimensional time-response or dose-response data for two-group comparisons. PMID 38012163	Sci Rep	2023	92	L1 92/100
Identification of herpesvirus transcripts from genomic regions around the replication origins. PMID 37773348	Sci Rep	2023	59	L1 59/100
Exploring the role and mechanism of Astragalus membranaceus and radix paeoniae rubra in idiopathic pulmonary fibrosis through network pharmacology and experimen ⚑ PMID 37666859	Sci Rep	2023	20	L1 20/100 ⚑
Comprehensive analysis of mitophagy in HPV-related head and neck squamous cell carcinoma. PMID 37161060	Sci Rep	2023	73	L1 73/100
Transcriptomic data meta-analysis reveals common and injury model specific gene expression changes in the regenerating zebrafish heart. PMID 37012284	Sci Rep	2023	90	L2 90/100
Software JimenaE allows efficient dynamic simulations of Boolean networks, centrality and system state analysis. ⚑ PMID 36725967	Sci Rep	2023	74	L1 74/100 ⚑
A chromosome-level genome assembly of Plantago ovata. PMID 36707685	Sci Rep	2023	99	L1 99/100
De novo transcriptome assembly and comprehensive assessment provide insight into fruiting body formation of Sparassis latifolia. ⚑ PMID 35773379	Sci Rep	2022	46	L1 46/100 ⚑
Quantum pixel representations and compression for N-dimensional images. PMID 35546151	Sci Rep	2022	87	L1 87/100
Loss of mutual protection between human osteoclasts and chondrocytes in damaged joints initiates osteoclast-mediated cartilage degradation by MMPs. PMID 34811438	Sci Rep	2021	50	L1 50/100
Design considerations for workflow management systems use in production genomics research and the clinic. PMID 34737383	Sci Rep	2021	57	L1 57/100
Meta-analysis of COVID-19 single-cell studies confirms eight key immune responses. PMID 34675242	Sci Rep	2021	69	L1 69/100
HTSQualC is a flexible and one-step quality control software for high-throughput sequencing data analysis. PMID 34548573	Sci Rep	2021	89	L1 89/100
Whole genome sequencing reveals possible host species adaptation of Streptococcus dysgalactiae. PMID 34462475	Sci Rep	2021	—	not yet assessed
A HML6 endogenous retrovirus on chromosome 3 is upregulated in amyotrophic lateral sclerosis motor cortex. PMID 34253796	Sci Rep	2021	84	84/100
Microbial sulfate reduction by Desulfovibrio is an important source of hydrogen sulfide from a large swine finishing facility. ⚑ PMID 34021225	Sci Rep	2021	70	L1 70/100 ⚑
Genome-wide insights into population structure and host specificity of Campylobacter jejuni. PMID 33990625	Sci Rep	2021	94	94/100
Gene co-expression network analysis in human spinal cord highlights mechanisms underlying amyotrophic lateral sclerosis susceptibility. PMID 33707641	Sci Rep	2021	100	L1 100/100
Systematic and computational identification of Androctonus crassicauda long non-coding RNAs. PMID 33633149	Sci Rep	2021	71	L1 71/100
Comprehensive analysis of metastatic gastric cancer tumour cells using single-cell RNA-seq. ⚑ PMID 33441952	Sci Rep	2021	47	L1 47/100 ⚑
Integrative network modeling reveals mechanisms underlying T cell exhaustion. PMID 32024856	Sci Rep	2020	59	L1 59/100
PulmonDB: a curated lung disease gene expression database. ⚑ PMID 31949184	Sci Rep	2020	53	L1 53/100 ⚑
Wx: a neural network-based feature selection algorithm for transcriptomic data. PMID 31324856	Sci Rep	2019	50	L1 50/100
SMAC, a computational system to link literature, biomedical and expression data. PMID 31324861	Sci Rep	2019	50	L1 50/100
GREIN: An Interactive Web Platform for Re-analyzing GEO RNA-seq Data. PMID 31110304	Sci Rep	2019	73	L1 73/100
DNA demethylation is associated with malignant progression of lower-grade gliomas. PMID 30760837	Sci Rep	2019	—	L1 No data access
A cross-species approach to identify transcriptional regulators exemplified for Dnajc22 and Hnf4a. PMID 28642491	Sci Rep	2017	76	L1 76/100
Topologically inferring pathway activity toward precise cancer classification via integrating genomic and metabolomic data: prostate cancer as a case. PMID 26286638	Sci Rep	2015	76	L1 76/100
Transcriptome analysis provides insights into the regulatory function of alternative splicing in antiviral immunity in grass carp (Ctenopharyngodon idella). ⚑ PMID 26248502	Sci Rep	2015	70	L1 70/100 ⚑
Time course profiling of host cell response to herpesvirus infection using nanopore and synthetic long-read transcriptome sequencing. PMID 34244540	Sci Rep	2021	50	L1 50/100