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194 matching publication(s)

Publication	Journal	Year	Score	Verdict
Genetically engineered stem cell-derived retinal grafts for improved retinal reconstruction after transplantation. PMID 34409267	iScience	2021	84	L1 84/100
A mechanistic model captures the emergence and implications of non-genetic heterogeneity and reversible drug resistance in ER+ breast cancer cells. PMID 34316714	NAR Cancer	2021	85	85/100
Projecting contact matrices in 177 geographical regions: An update and comparison with empirical data for the COVID-19 era. PMID 34310590	PLoS Comput Biol	2021	98	L1 98/100
Reactivation of a developmentally silenced embryonic globin gene. PMID 34290235	Nat Commun	2021	85	L1 85/100
Dental Plaque Microbial Resistomes of Periodontal Health and Disease and Their Changes after Scaling and Root Planing Therapy. PMID 34287005	mSphere	2021	76	L1 76/100
Computationally scalable regression modeling for ultrahigh-dimensional omics data with ParProx. PMID 34254998	Brief Bioinform	2021	79	L1 79/100
Detection of Virus-Related Sequences Associated With Potential Etiologies of Hepatitis in Liver Tissue Samples From Rats, Mice, Shrews, and Bats. PMID 34177835	Front Microbiol	2021	79	L1 79/100
Collisionless relaxation of a disequilibrated current sheet and implications for bifurcated structures. PMID 34145266	Nat Commun	2021	95	L1 95/100
TGF-β-dependent reprogramming of amino acid metabolism induces epithelial-mesenchymal transition in non-small cell lung cancers. PMID 34168290	Commun Biol	2021	85	L1 85/100
Identification and analysis of genes associated with epithelial ovarian cancer by integrated bioinformatics methods. PMID 34143800	PLoS One	2021	75	L1 75/100
PredTAD: A machine learning framework that models 3D chromatin organization alterations leading to oncogene dysregulation in breast cancer cell lines. PMID 34093998	Comput Struct Biotechnol J	2021	77	L1 77/100
The relationship between PLOD1 expression level and glioma prognosis investigated using public databases. PMID 34040895	PeerJ	2021	79	79/100
Development of double-positive thymocytes at single-cell resolution. PMID 33771202	Genome Med	2021	86	L1 86/100
Topological signatures in regulatory network enable phenotypic heterogeneity in small cell lung cancer. PMID 33729159	Elife	2021	94	L1 94/100
The SARS-CoV-2 subgenome landscape and its novel regulatory features. PMID 33713597	Mol Cell	2021	84	L1 84/100
Tumor methionine metabolism drives T-cell exhaustion in hepatocellular carcinoma. PMID 33674593	Nat Commun	2021	78	L1 78/100
In vivo structural characterization of the SARS-CoV-2 RNA genome identifies host proteins vulnerable to repurposed drugs. PMID 33636127	Cell	2021	95	L1 95/100
Experimental identification and in silico prediction of bacterivory in green algae. PMID 33649548	ISME J	2021	93	L1 93/100
Epigenome screening highlights that JMJD6 confers an epigenetic vulnerability and mediates sunitinib sensitivity in renal cell carcinoma. PMID 33634984	Clin Transl Med	2021	85	L1 85/100
Expression quantitative trait loci in sheep liver and muscle contribute to variations in meat traits. PMID 33461502	Genet Sel Evol	2021	90	L1 90/100
Macrel: antimicrobial peptide screening in genomes and metagenomes. PMID 33384902	PeerJ	2020	83	L1 83/100
Systematic clustering algorithm for chromatin accessibility data and its application to hematopoietic cells. PMID 33253153	PLoS Comput Biol	2020	90	L1 90/100
Inference of Subpathway Activity Profiles Reveals Metabolism Abnormal Subpathway Regions in Glioblastoma Multiforme. PMID 33072547	Front Oncol	2020	89	L1 89/100
Evaluating Distribution and Prognostic Value of New Tumor-Infiltrating Lymphocytes in HCC Based on a scRNA-Seq Study With CIBERSORTx. PMID 33043022	Front Med (Lausanne)	2020	78	L1 78/100
Colorectal Cancer Prediction Based on Weighted Gene Co-Expression Network Analysis and Variational Auto-Encoder. ⚑ PMID 32825264	Biomolecules	2020	80	L1 80/100 ⚑
Mitochondrial volume fraction and translation duration impact mitochondrial mRNA localization and protein synthesis. PMID 32762840	Elife	2020	81	L1 81/100
Comparing the utility of in vivo transposon mutagenesis approaches in yeast species to infer gene essentiality. PMID 32681306	Curr Genet	2020	81	L1 81/100
Meta-analysis of gene expression profiles of lean and obese PCOS to identify differentially regulated pathways and risk of comorbidities. PMID 32695266	Comput Struct Biotechnol J	2020	78	L1 78/100
Integrated omics in Drosophila uncover a circadian kinome. PMID 32483184	Nat Commun	2020	98	L1 98/100
A reference profile-free deconvolution method to infer cancer cell-intrinsic subtypes and tumor-type-specific stromal profiles. PMID 32111252	Genome Med	2020	91	L1 91/100
The exonuclease Xrn1 activates transcription and translation of mRNAs encoding membrane proteins. PMID 30899024	Nat Commun	2019	85	L1 85/100
CellFishing.jl: an ultrafast and scalable cell search method for single-cell RNA sequencing. PMID 30744683	Genome Biol	2019	97	L1 97/100
Firefly genomes illuminate parallel origins of bioluminescence in beetles. PMID 30324905	Elife	2018	93	L1 93/100
Metabolite-Centric Reporter Pathway and Tripartite Network Analysis of Arabidopsis Under Cold Stress. PMID 30258841	Front Bioeng Biotechnol	2018	83	L1 83/100
Whole genome and transcriptome maps of the entirely black native Korean chicken breed Yeonsan Ogye. PMID 30010758	Gigascience	2018	91	L1 91/100
Genome-wide identification of conserved and novel microRNAs in one bud and two tender leaves of tea plant (Camellia sinensis) by small RNA sequencing, microarra PMID 29157210	BMC Plant Biol	2017	91	L1 91/100
DFAST and DAGA: web-based integrated genome annotation tools and resources. PMID 27867804	Biosci Microbiota Food Health	2016	89	L1 89/100
Metavisitor, a Suite of Galaxy Tools for Simple and Rapid Detection and Discovery of Viruses in Deep Sequence Data. PMID 28045932	PLoS One	2017	78	L1 78/100
Genome of the Asian longhorned beetle (Anoplophora glabripennis), a globally significant invasive species, reveals key functional and evolutionary innovations a PMID 27832824	Genome Biol	2016	84	L1 84/100
Identification and Characterization of Small Noncoding RNAs in Genome Sequences of the Edible Fungus Pleurotus ostreatus. PMID 27703969	Biomed Res Int	2016	95	L1 95/100
Topologically inferring pathway activity toward precise cancer classification via integrating genomic and metabolomic data: prostate cancer as a case. PMID 26286638	Sci Rep	2015	76	L1 76/100
A Deluge of Complex Repeats: The Solanum Genome. PMID 26241045	PLoS One	2015	94	L1 94/100
Cell Specific eQTL Analysis without Sorting Cells. PMID 25955312	PLoS Genet	2015	90	L1 90/100
Intra-Host Co-Existing Strains of SARS-CoV-2 Reference Genome Uncovered by Exhaustive Computational Search. PMID 37243151	Viruses	2023	100	L1 100/100