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21 matching publication(s)

Publication	Journal	Year	Score	Verdict
Statistical framework for calling allelic imbalance in high-throughput sequencing data. PMID 39966391	Nat Commun	2025	89	L1 89/100
Multi-INTACT: integrative analysis of the genome, transcriptome, and proteome identifies causal mechanisms of complex traits. PMID 39901160	Genome Biol	2025	86	L1 86/100
The Multi-State Epigenetic Pacemaker enables the identification of combinations of factors that influence DNA methylation. PMID 39549198	Geroscience	2024	54	L1 54/100
Rfam 15: RNA families database in 2025. PMID 39526405	Nucleic Acids Res	2025	68	L1 68/100
Community assessment of methods to deconvolve cellular composition from bulk gene expression. PMID 39191725	Nat Commun	2024	63	L1 63/100
Design of a targeted blood transcriptional panel for monitoring immunological changes accompanying pregnancy. PMID 38352867	Front Immunol	2024	73	L1 73/100
TransOrGAN: An Artificial Intelligence Mapping of Rat Transcriptomic Profiles between Organs, Ages, and Sexes. PMID 37200521	Chem Res Toxicol	2023	84	L1 84/100
On the holobiont 'predictome' of immunocompetence in pigs. ⚑ PMID 37127575	Genet Sel Evol	2023	40	L1 40/100 ⚑
An individualized causal framework for learning intercellular communication networks that define microenvironments of individual tumors. PMID 36548438	PLoS Comput Biol	2022	67	L1 67/100
Optimisation of the core subset for the APY approximation of genomic relationships. PMID 36418945	Genet Sel Evol	2022	85	L1 85/100
An integrated in silico-in vitro approach for identifying therapeutic targets against osteoarthritis. PMID 36352408	BMC Biol	2022	84	L1 84/100
Assessment of genotyping array performance for genome-wide association studies and imputation in African cattle. PMID 36057548	Genet Sel Evol	2022	90	L1 90/100
Differentially expressed genes reflect disease-induced rather than disease-causing changes in the transcriptome. PMID 34561431	Nat Commun	2021	100	L1 100/100
Similarities and Differences in Gene Expression Networks Between the Breast Cancer Cell Line Michigan Cancer Foundation-7 and Invasive Human Breast Cancer Tissu PMID 34056582	Front Artif Intell	2021	92	L1 92/100
A Meta-Analysis of Wolbachia Transcriptomics Reveals a Stage-Specific Wolbachia Transcriptional Response Shared Across Different Hosts. ⚑ PMID 32718933	G3 (Bethesda)	2020	89	L1 89/100 ⚑
A crowdsourced set of curated structural variants for the human genome. PMID 32559231	PLoS Comput Biol	2020	71	L1 71/100
miEAA 2.0: integrating multi-species microRNA enrichment analysis and workflow management systems. PMID 32374865	Nucleic Acids Res	2020	61	L1 61/100
PulmonDB: a curated lung disease gene expression database. ⚑ PMID 31949184	Sci Rep	2020	53	L1 53/100 ⚑
PanglaoDB: a web server for exploration of mouse and human single-cell RNA sequencing data. PMID 30951143	Database (Oxford)	2019	80	L1 80/100
Cell Specific eQTL Analysis without Sorting Cells. PMID 25955312	PLoS Genet	2015	90	L1 90/100
Conservation and losses of non-coding RNAs in avian genomes. PMID 25822729	PLoS One	2015	100	L1 100/100