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15 matching publication(s)

Publication	Journal	Year	Score	Verdict
ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia. PMID 22955991	Genome Res	2012	74	L1 74/100
The systematic assessment of completeness of public metadata accompanying omics studies in the Gene Expression Omnibus data repository. PMID 40926267	Genome Biol	2025	99	L1 99/100
What defines a photosynthetic microbial mat in western Antarctica? PMID 40043057	PLoS One	2025	85	L1 85/100
Differential Infiltration of Key Immune T-Cell Populations Across Malignancies Varying by Immunogenic Potential and the Likelihood of Response to Immunotherapy. PMID 39682743	Cells	2024	—	L1 No data access
Developmental hematopoietic stem cell variation explains clonal hematopoiesis later in life. PMID 39592593	Nat Commun	2024	90	L1 90/100
Integrated drug resistance and leukemic stemness gene-expression scores predict outcomes in large cohort of over 3500 AML patients from 10 trials. PMID 39090192	NPJ Precis Oncol	2024	50	L1 50/100
Analytical code sharing practices in biomedical research. PMID 38983240	PeerJ Comput Sci	2024	92	L1 92/100
Stromal androgen signaling acts as tumor niches to drive prostatic basal epithelial progenitor-initiated oncogenesis. ⚑ PMID 36323713	Nat Commun	2022	63	L1 63/100 ⚑
The third international hackathon for applying insights into large-scale genomic composition to use cases in a wide range of organisms. PMID 36262335	F1000Res	2022	59	L1 59/100
Chemical reversible crosslinking enables measurement of RNA 3D distances and alternative conformations in cells. PMID 35177610	Nat Commun	2022	84	L1 84/100
Population differentiation and epidemic tracking of Bursaphelenchus xylophilus in China based on chromosome-level assembly and whole-genome sequencing data. ⚑ PMID 34839581	Pest Manag Sci	2021	44	L1 44/100 ⚑
Creation of a Single Cell RNASeq Meta-Atlas to Define Human Liver Immune Homeostasis. ⚑ PMID 34335581	Front Immunol	2021	63	L1 63/100 ⚑
miEAA 2.0: integrating multi-species microRNA enrichment analysis and workflow management systems. PMID 32374865	Nucleic Acids Res	2020	61	L1 61/100
pysradb: A Python package to query next-generation sequencing metadata and data from NCBI Sequence Read Archive. PMID 31114675	F1000Res	2019	90	L1 90/100
Genomic Description of 'Candidatus Abyssubacteria,' a Novel Subsurface Lineage Within the Candidate Phylum Hydrogenedentes. PMID 30210471	Front Microbiol	2018	91	L1 91/100