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Functional differentiation determines the molecular basis of the symbiotic lifestyle of Ca. Nanohaloarchaeota.
PMID 36242054 · Microbiome · 2022
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Genome of the endangered Guatemalan Beaded Lizard, Heloderma charlesbogerti, reveals evolutionary relationships of squamates and declines in effective populatio⚑
PMID 36226801 · G3 (Bethesda) · 2022
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OSeMOSYS Global, an open-source, open data global electricity system model generator.
PMID 36241673 · Sci Data · 2022
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The GATA factor ELT-3 specifies endoderm in Caenorhabditis angaria in an ancestral gene network.
PMID 36196618 · Development · 2022
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miR-4478 Accelerates Nucleus Pulposus Cells Apoptosis Induced by Oxidative Stress by Targeting MTH1.
PMID 36130054 · Spine (Phila Pa 1976) · 2022
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AI-assisted discovery of an ethnicity-influenced driver of cell transformation in esophageal and gastroesophageal junction adenocarcinomas.
PMID 36134663 · JCI Insight · 2022
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Genome Sequencing of Methicillin-Resistant and Methicillin-Susceptible Mammaliicoccus sciuri from Diseased Animals.
PMID 36125295 · Microbiol Resour Announc · 2022
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Massively parallel genomic perturbations with multi-target CRISPR interrogates Cas9 activity and DNA repair at endogenous sites.
PMID 36064968 · Nat Cell Biol · 2022
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Assessment of genotyping array performance for genome-wide association studies and imputation in African cattle.
PMID 36057548 · Genet Sel Evol · 2022
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Systems spatiotemporal dynamics of traumatic brain injury at single-cell resolution reveals humanin as a therapeutic target.
PMID 35951114 · Cell Mol Life Sci · 2022
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Systematic Analysis of Long Non-Coding RNA Genes in Nonalcoholic Fatty Liver Disease.
PMID 35893239 · Noncoding RNA · 2022
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Prediction of Antibiotic Susceptibility Profiles of Vibrio cholerae Isolates From Whole Genome Illumina and Nanopore Sequencing Data: CholerAegon.
PMID 35814690 · Front Microbiol · 2022
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NETISCE: a network-based tool for cell fate reprogramming.
PMID 35725577 · NPJ Syst Biol Appl · 2022
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A scalable, open-source implementation of a large-scale mechanistic model for single cell proliferation and death signaling.
PMID 35729113 · Nat Commun · 2022
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Identification and functional implications of pseudouridine RNA modification on small noncoding RNAs in the mammalian pathogen Trypanosoma brucei.
PMID 35714765 · J Biol Chem · 2022
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BaRTv2: a highly resolved barley reference transcriptome for accurate transcript-specific RNA-seq quantification.
PMID 35704392 · Plant J · 2022
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Ultra-deep multi-oncopanel sequencing of benchmarking samples with a wide range of variant allele frequencies.⚑
PMID 35680918 · Sci Data · 2022
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TFAP2 paralogs facilitate chromatin access for MITF at pigmentation and cell proliferation genes.
PMID 35580127 · PLoS Genet · 2022
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nf-rnaSeqCount: A Nextflow pipeline for obtaining raw read counts from RNA-seq data.
PMID 35574063 · S Afr Comput J · 2021
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Discovery of Early-Branching Wolbachia Reveals Functional Enrichment on Horizontally Transferred Genes.⚑
PMID 35547116 · Front Microbiol · 2022
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Quantum pixel representations and compression for N-dimensional images.
PMID 35546151 · Sci Rep · 2022
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A computational pipeline to visualize DNA-protein binding states using dSMF data.
PMID 35463472 · STAR Protoc · 2022
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Ultra-deep sequencing data from a liquid biopsy proficiency study demonstrating analytic validity.
PMID 35418127 · Sci Data · 2022
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Cotranscriptional RNA strand exchange underlies the gene regulation mechanism in a purine-sensing transcriptional riboswitch.
PMID 35348734 · Nucleic Acids Res · 2022
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Genome and cuticular hydrocarbon-based species delimitation shed light on potential drivers of speciation in a Neotropical ant species complex.
PMID 35342602 · Ecol Evol · 2022
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Severe COVID-19 Shares a Common Neutrophil Activation Signature with Other Acute Inflammatory States.
PMID 35269470 · Cells · 2022
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Enhanced protein isoform characterization through long-read proteogenomics.
PMID 35241129 · Genome Biol · 2022
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SEAseq: a portable and cloud-based chromatin occupancy analysis suite.
PMID 35193506 · BMC Bioinformatics · 2022
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Single-Cell Differential Network Analysis with Sparse Bayesian Factor Models.
PMID 35186014 · Front Genet · 2022
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Chemical reversible crosslinking enables measurement of RNA 3D distances and alternative conformations in cells.
PMID 35177610 · Nat Commun · 2022
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Transcriptomic-Based Quantification of the Epithelial-Hybrid-Mesenchymal Spectrum across Biological Contexts.
PMID 35053177 · Biomolecules · 2021
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Species-Wide Phylogenomics of the Staphylococcus aureus Agr Operon Revealed Convergent Evolution of Frameshift Mutations.
PMID 35044202 · Microbiol Spectr · 2022
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Itaconate and derivatives reduce interferon responses and inflammation in influenza A virus infection.
PMID 35025971 · PLoS Pathog · 2022
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The formation of avian montane diversity across barriers and along elevational gradients.
PMID 35022441 · Nat Commun · 2022
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The butyrophilin 1a1 knockout mouse revisited: Ablation of Btn1a1 leads to concurrent cell death and renewal in the mammary epithelium during lactation.
PMID 34938960 · FASEB Bioadv · 2021
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Reactive astrocytes acquire neuroprotective as well as deleterious signatures in response to Tau and Aß pathology.
PMID 35013236 · Nat Commun · 2022
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Foster thy young: enhanced prediction of orphan genes in assembled genomes.
PMID 34928390 · Nucleic Acids Res · 2022
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Assessing Bos taurus introgression in the UOA Bos indicus assembly.
PMID 34922445 · Genet Sel Evol · 2021
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Epigenetic loss of heterogeneity from low to high grade localized prostate tumours.
PMID 34911933 · Nat Commun · 2021
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An archaeal histone-like protein regulates gene expression in response to salt stress.
PMID 34883507 · Nucleic Acids Res · 2021
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Aryl Hydrocarbon Receptor (AhR) Activation by 2,3,7,8-Tetrachlorodibenzo-p-Dioxin (TCDD) Dose-Dependently Shifts the Gut Microbiome Consistent with the P
PMID 34830313 · Int J Mol Sci · 2021
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An integrative proteomics method identifies a regulator of translation during stem cell maintenance and differentiation.
PMID 34772928 · Nat Commun · 2021
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Large-scale integration of single-cell transcriptomic data captures transitional progenitor states in mouse skeletal muscle regeneration.
PMID 34773081 · Commun Biol · 2021
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Lamin C is required to establish genome organization after mitosis.
PMID 34775987 · Genome Biol · 2021
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A whole genome duplication drives the genome evolution of Phytophthora betacei, a closely related species to Phytophthora infestans.
PMID 34740326 · BMC Genomics · 2021
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Disrupted PGR-B and ESR1 signaling underlies defective decidualization linked to severe preeclampsia.
PMID 34709177 · Elife · 2021
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Calibration-free NGS quantitation of mutations below 0.01% VAF.
PMID 34675197 · Nat Commun · 2021
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Pathway signatures derived from on-treatment tumor specimens predict response to anti-PD1 blockade in metastatic melanoma.
PMID 34654806 · Nat Commun · 2021
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Tbx5 drives Aldh1a2 expression to regulate a RA-Hedgehog-Wnt gene regulatory network coordinating cardiopulmonary development.
PMID 34643182 · Elife · 2021
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