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1194 matching publication(s)
NETISCE: a network-based tool for cell fate reprogramming.
PMID 35725577 · NPJ Syst Biol Appl · 2022
85/100
A scalable, open-source implementation of a large-scale mechanistic model for single cell proliferation and death signaling.
PMID 35729113 · Nat Commun · 2022
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84/100
A hybrid empirical and parametric approach for managing ecosystem complexity: Water quality in Lake Geneva under nonstationary futures.
PMID 35733249 · Proc Natl Acad Sci U S A · 2022
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69/100
Antibiotic Drug screening and Image Characterization Toolbox (A.D.I.C.T.): a robust imaging workflow to monitor antibiotic stress response in bacterial cells <i
PMID 35707454 · F1000Res · 2021
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88/100
Transcriptional regulation and chromatin architecture maintenance are decoupled functions at the Sox2 locus.
PMID 35710138 · Genes Dev · 2022
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81/100
Identification and functional implications of pseudouridine RNA modification on small noncoding RNAs in the mammalian pathogen Trypanosoma brucei.
PMID 35714765 · J Biol Chem · 2022
80/100
Expression and Secretion of Circular RNAs in the Parasitic Nematode, Ascaris suum.⚑
PMID 35711944 · Front Genet · 2022
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20/100
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BaRTv2: a highly resolved barley reference transcriptome for accurate transcript-specific RNA-seq quantification.
PMID 35704392 · Plant J · 2022
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94/100
Implementing the reuse of public DIA proteomics datasets: from the PRIDE database to Expression Atlas.
PMID 35701420 · Sci Data · 2022
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50/100
Ultra-deep multi-oncopanel sequencing of benchmarking samples with a wide range of variant allele frequencies.⚑
PMID 35680918 · Sci Data · 2022
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82/100
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GeMI: interactive interface for transformer-based Genomic Metadata Integration.
PMID 35657113 · Database (Oxford) · 2022
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64/100
Dissection of multiple sclerosis genetics identifies B and CD4+ T cells as driver cell subsets.
PMID 35672799 · Genome Biol · 2022
L1
No data access
Utility of Triti-Map for bulk-segregated mapping of causal genes and regulatory elements in Triticeae.
PMID 35605195 · Plant Commun · 2022
L1
95/100
A Decentralized Kidney Transplant Biopsy Classifier for Transplant Rejection Developed Using Genes of the Banff-Human Organ Transplant Panel.
PMID 35619722 · Front Immunol · 2022
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90/100
Improving recombinant protein production by yeast through genome-scale modeling using proteome constraints.
PMID 35624178 · Nat Commun · 2022
L1
84/100
Bioinformatics Analysis of the Characteristics and Correlation of m6A Methylation in Breast Cancer Progression.
PMID 35655723 · Contrast Media Mol Imaging · 2022
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48/100
TFAP2 paralogs facilitate chromatin access for MITF at pigmentation and cell proliferation genes.
PMID 35580127 · PLoS Genet · 2022
L2
95/100
nf-rnaSeqCount: A Nextflow pipeline for obtaining raw read counts from RNA-seq data.
PMID 35574063 · S Afr Comput J · 2021
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95/100
RegulonDB 11.0: Comprehensive high-throughput datasets on transcriptional regulation in Escherichia coli K-12.⚑
PMID 35584008 · Microb Genom · 2022
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61/100
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Discovery of Early-Branching Wolbachia Reveals Functional Enrichment on Horizontally Transferred Genes.⚑
PMID 35547116 · Front Microbiol · 2022
L1
90/100
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Quantum pixel representations and compression for N-dimensional images.
PMID 35546151 · Sci Rep · 2022
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87/100
Multi-scale integrative analyses identify THBS2+ cancer-associated fibroblasts as a key orchestrator promoting aggressiveness in early-stage lung ade
PMID 35547750 · Theranostics · 2022
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68/100
EDGE COVID-19: a web platform to generate submission-ready genomes from SARS-CoV-2 sequencing efforts.⚑
PMID 35561186 · Bioinformatics · 2022
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49/100
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A bioinformatic pipeline for simulating viral integration data.
PMID 35496474 · Data Brief · 2022
96/100
GEMmaker: process massive RNA-seq datasets on heterogeneous computational infrastructure.
PMID 35501696 · BMC Bioinformatics · 2022
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67/100
Identifying Molecular Subtypes and 6-Gene Prognostic Signature Based on Hypoxia for Optimizing Targeted Therapies in Non-Small Cell Lung Cancer.
PMID 35509605 · Int J Gen Med · 2022
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59/100
Enhancer RNAs stimulate Pol II pause release by harnessing multivalent interactions to NELF.
PMID 35508485 · Nat Commun · 2022
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55/100
Long-Read RNA Sequencing Identifies Polyadenylation Elongation and Differential Transcript Usage of Host Transcripts During SARS-CoV-2 In Vitro Infection
PMID 35464437 · Front Immunol · 2022
L1
90/100
Deconvolution of the hematopoietic stem cell microenvironment reveals a high degree of specialization and conservation.
PMID 35494238 · iScience · 2022
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60/100
Comprehensive enhancer-target gene assignments improve gene set level interpretation of genome-wide regulatory data.
PMID 35473573 · Genome Biol · 2022
not yet assessed
A computational pipeline to visualize DNA-protein binding states using dSMF data.
PMID 35463472 · STAR Protoc · 2022
L1
89/100
Transcriptomic Data Meta-Analysis Sheds Light on High Light Response in Arabidopsis thaliana L.
PMID 35457273 · Int J Mol Sci · 2022
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88/100
Identification of the Wheat (Triticum aestivum) IQD Gene Family and an Expression Analysis of Candidate Genes Associated with Seed Dormancy and Germination
PMID 35456910 · Int J Mol Sci · 2022
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78/100
Satellitome Analysis and Transposable Elements Comparison in Geographically Distant Populations of Spodoptera frugiperda.
PMID 35455012 · Life (Basel) · 2022
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67/100
Blood Transcriptome Analysis of Septic Patients Reveals a Long Non-Coding Alu-RNA in the Complement C5a Receptor 1 Gene.
PMID 35447887 · Noncoding RNA · 2022
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64/100
Environment and Co-occurring Native Mussel Species, but Not Host Genetics, Impact the Microbiome of a Freshwater Invasive Species (Corbicula fluminea).
PMID 35444631 · Front Microbiol · 2022
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55/100
Molecular Biomarker of Drug Resistance Developed From Patient-Derived Organoids Predicts Survival of Colorectal Cancer Patients.
PMID 35425715 · Front Oncol · 2022
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53/100
NUSAP1 Could be a Potential Target for Preventing NAFLD Progression to Liver Cancer.⚑
PMID 35431924 · Front Pharmacol · 2022
L1
45/100
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Ultra-deep sequencing data from a liquid biopsy proficiency study demonstrating analytic validity.
PMID 35418127 · Sci Data · 2022
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87/100
Enhanced Bioremediation Potential of Shewanella decolorationis RNA Polymerase Mutants and Evidence for Novel Azo Dye Biodegradation Pathways.
PMID 35391736 · Front Microbiol · 2022
L1
80/100
The HCV Envelope Glycoprotein Down-Modulates NF-κB Signalling and Associates With Stimulation of the Host Endoplasmic Reticulum Stress Pathway.
PMID 35371105 · Front Immunol · 2022
L1
50/100
Cotranscriptional RNA strand exchange underlies the gene regulation mechanism in a purine-sensing transcriptional riboswitch.
PMID 35348734 · Nucleic Acids Res · 2022
L1
91/100
Genome and cuticular hydrocarbon-based species delimitation shed light on potential drivers of speciation in a Neotropical ant species complex.
PMID 35342602 · Ecol Evol · 2022
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87/100
Horizontal transmission enables flexible associations with locally adapted symbiont strains in deep-sea hydrothermal vent symbioses.
PMID 35349333 · Proc Natl Acad Sci U S A · 2022
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66/100
PowerBacGWAS: a computational pipeline to perform power calculations for bacterial genome-wide association studies.
PMID 35338232 · Commun Biol · 2022
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85/100
Prospects of telomere-to-telomere assembly in barley: Analysis of sequence gaps in the MorexV3 reference genome.
PMID 35338551 · Plant Biotechnol J · 2022
71/100
MEDUSA: A Pipeline for Sensitive Taxonomic Classification and Flexible Functional Annotation of Metagenomic Shotgun Sequences.
PMID 35330728 · Front Genet · 2022
L1
50/100
Harnessing secretory pathway differences between HEK293 and CHO to rescue production of difficult to express proteins.
PMID 35301123 · Metab Eng · 2022
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71/100