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13 matching publication(s)
TP53 engagement with the genome occurs in distinct local chromatin environments via pioneer factor activity.
PMID 25391375 · Genome Res · 2014
L1
80/100
High-resolution mapping of transcriptional dynamics across tissue development reveals a stable mRNA-tRNA interface.
PMID 25122613 · Genome Res · 2014
L1
87/100
LaSSO, a strategy for genome-wide mapping of intronic lariats and branch points using RNA-seq.
PMID 24709818 · Genome Res · 2014
L1
68/100
Genomic and transcriptomic plasticity in treatment-naive ovarian cancer.
PMID 24221193 · Genome Res · 2013
L1
30/100
Integrative transcriptome sequencing identifies trans-splicing events with important roles in human embryonic stem cell pluripotency.
PMID 24131564 · Genome Res · 2013
L1
100/100
Bisulfite sequencing of chromatin immunoprecipitated DNA (BisChIP-seq) directly informs methylation status of histone-modified DNA.
PMID 22466171 · Genome Res · 2012
L1
80/100
TRIM28 repression of retrotransposon-based enhancers is necessary to preserve transcriptional dynamics in embryonic stem cells.
PMID 23233547 · Genome Res · 2012
L1
78/100
ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia.
PMID 22955991 · Genome Res · 2012
L1
74/100
H3K27 and H3K9 methylation mask potential CTCF binding sites to maintain 3D genome integrity.⚑
PMID 40764058 · Genome Res · 2025
L1
55/100
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The Planemo toolkit for developing, deploying, and executing scientific data analyses in Galaxy and beyond.
PMID 36828587 · Genome Res · 2023
L1
No computation
Identification of phenotype-specific networks from paired gene expression-cell shape imaging data.
PMID 35197309 · Genome Res · 2022
L1
100/100
A ChIP-exo screen of 887 Protein Capture Reagents Program transcription factor antibodies in human cells.
PMID 34426512 · Genome Res · 2021
L1
57/100
Dynamic reversal of random X-Chromosome inactivation during iPSC reprogramming.
PMID 31515287 · Genome Res · 2019
L1
75/100