Rachel Legendre

The share of this author’s assessed papers carrying a ⚑ flag. A concentration is a prompt for expert review — never, on its own, a determination about the person.

Collaborators, sized by shared output and coloured by their own reproducibility (green = high, red = low). Click a node to open their card. A pattern is a prompt for review, never a determination.

How this author’s assessed papers reproduced — the outcome of reproduction attempts, not a judgement of the person. Coverage is partial and grows over time.

Assessed papers (1)

• 4-Methylcytosine DNA modification is critical for global epigenetic regulation and virulence in the human pathogen Leptospira interrogans.
  2020 L1 78/100

1 assessed by us (1 reproduced) · 117 not yet assessed — every PubMed paper on record, linked below.

• Lassa and Mopeia viruses produce different RIG-I-activating RNA in the absence of a functional viral exoribonuclease domain ↗

  Journal of Virology · 2026 · PMID 42112905
  not yet assessed
• The epigenomic landscape of bronchial epithelial cells reveals the establishment of trained immunity ↗

  Genes and Immunity · 2025 · PMID 40993329
  not yet assessed
• Dengue virus susceptibility in Aedes aegypti linked to natural cytochrome P450 promoter variants ↗

  Nature Communications · 2025 · PMID 40796739
  not yet assessed
• The virulence regulator CovR boosts CRISPR-Cas9 immunity in Group B Streptococcus ↗

  Nature Communications · 2025 · PMID 40593653
  not yet assessed
• The epigenomic landscape of bronchial epithelial cells reveals the establishment of trained immunity ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2025
  not yet assessed
• Dengue virus susceptibility in <i>Aedes aegypti</i> linked to natural cytochrome P450 variants ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2025
  not yet assessed
• Leishmania exploits the macrophage m6A reader IGF2BP2 for glycolytic reprogramming and host cell survival ↗

  Research Square · 2025
  not yet assessed
• RABV L protein plays a role in immune escape through its methyltransferase activity ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2025
  not yet assessed
• Differential stress responsiveness determines intraspecies virulence heterogeneity and host adaptation in Listeria monocytogenes ↗

  Nature Microbiology · 2024 · PMID 39578578
  not yet assessed
• Constitutive activation of two-component systems reveals regulatory network interactions in Streptococcus agalactiae ↗

  Nature Communications · 2024 · PMID 39448655
  not yet assessed
• Prosaposin maintains adult neural stem cells in a state associated with deep quiescence ↗

  Stem Cell Reports · 2024 · PMID 38518783
  not yet assessed
• The SaeRS two-component system regulates virulence gene expression in group B <i>Streptococcus</i> during invasive infection ↗

  mBio · 2024 · PMID 39158291
  not yet assessed
• Comparative analysis of rabies pathogenic and vaccine strains detection by RIG-I-like receptors ↗

  Microbes and Infection · 2024 · PMID 38461968
  not yet assessed
• Coordinated regulation of osmotic imbalance by c-di-AMP shapes ß-lactam tolerance in Group B <i>Streptococcus</i> ↗

  microLife · 2024 · PMID 38993744
  not yet assessed
• Signal-independent activation reveals two-component regulatory networks ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2024
  not yet assessed
• MAPPING CHANGES OF MIRNA-MRNA NETWORKS IN <i>LEISHMANIA-INFECTED</i> MACROPHAGES PREDICTS REGULATORY MIRNA-TF LOOPS AS NOVEL TARGETS OF PARASITE IMMUNE SUBVERSION ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2024
  not yet assessed
• Coordinated regulation of osmotic imbalance by c-di-AMP shapes ß-lactam tolerance in Group B <i>Streptococcus</i> ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2024
  not yet assessed
• Virulence regulates and boosts CRISPR-Cas9 immunity in Group B <i>Streptococcus</i> ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2024
  not yet assessed
• Depletion of slow-cycling PDGFRα+ADAM12+ mesenchymal cells promotes antitumor immunity by restricting macrophage efferocytosis ↗

  Nature Immunology · 2023 · PMID 37798557
  not yet assessed
• Transcriptome profiling of human col\onic cells exposed to the gut pathobiont Streptococcus gallolyticus subsp. gallolyticus ↗

  PLoS ONE · 2023 · PMID 38033043
  not yet assessed
• Transcriptome profiling of human colonic cells exposed to the gut pathobiont <i>Streptococcus gallolyticus</i> subsp. <i>gallolyticus</i> ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2023
  not yet assessed
• Prosaposin maintains adult neural stem cells in a state associated with deep quiescence ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2023
  not yet assessed
• Trained ILC3 responses promote intestinal defense ↗

  Science · 2022 · PMID 35201883
  not yet assessed
• Y RNAs are conserved endogenous RIG-I ligands across RNA virus infection and are targeted by HIV-1 ↗

  iScience · 2022 · PMID 35789859
  not yet assessed
• PDGFRα-induced stromal maturation is required to restrain postnatal intestinal epithelial stemness and promote defense mechanisms ↗

  Cell stem cell · 2022 · PMID 35523143
  not yet assessed
• Experimental evolution links post-transcriptional regulation to Leishmania fitness gain ↗

  PLoS Pathogens · 2022 · PMID 35294501
  not yet assessed
• The gut environment regulates bacterial gene expression which modulates susceptibility to bacteriophage infection ↗

  Cell Host & Microbe · 2022 · PMID 35421351
  not yet assessed
• IRF8 regulates efficacy of therapeutic anti‐CD20 monoclonal antibodies ↗

  European Journal of Immunology · 2022 · PMID 36030374
  not yet assessed
• ePeak: from replicated chromatin profiling data to epigenomic dynamics ↗

  NAR Genomics and Bioinformatics · 2022 · PMID 35664802
  not yet assessed
• Maternal age affects equine day 8 embryo gene expression both in trophoblast and inner cell mass ↗

  BMC Genomics · 2022 · PMID 35705916
  not yet assessed
• The m ⁶ A reader IGF2BP2 directs immune-metabolic reprogramming in Leishmania amazonensis-infected macrophages ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2022
  not yet assessed
• <i>Leishmania amazonensis</i> controls macrophage-regulated cell death to establish chronic infection <i>in vitro</i> and <i>in vivo</i> ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2022
  not yet assessed
• Recognition of copy-back defective interfering rabies virus genomes by RIG-I triggers the antiviral response against vaccine strains ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2022
  not yet assessed
• Nulliparity affects the expression of a limited number of genes and pathways in Day 8 equine embryos ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2022
  not yet assessed
• La mémoire de l’immunité innée des cellules épithéliales bronchiques ↗

  Revue des Maladies Respiratoires · 2022
  not yet assessed
• Author Reply to Peer Reviews of Recognition of copy-back defective interfering rabies virus genomes by RIG-I triggers the antiviral response against vaccine strains ↗

  2022
  not yet assessed
• Additional file 7 of Maternal age affects equine day 8 embryo gene expression both in trophoblast and inner cell mass ↗

  Figshare · 2022
  not yet assessed
• Additional file 6 of Maternal age affects equine day 8 embryo gene expression both in trophoblast and inner cell mass ↗

  Figshare · 2022
  not yet assessed
• Additional file 4 of Maternal age affects equine day 8 embryo gene expression both in trophoblast and inner cell mass ↗

  Figshare · 2022
  not yet assessed
• Additional file 5 of Maternal age affects equine day 8 embryo gene expression both in trophoblast and inner cell mass ↗

  Figshare · 2022
  not yet assessed
• Additional file 9 of Maternal age affects equine day 8 embryo gene expression both in trophoblast and inner cell mass ↗

  Figshare · 2022
  not yet assessed
• Additional file 3 of Maternal age affects equine day 8 embryo gene expression both in trophoblast and inner cell mass ↗

  Figshare · 2022
  not yet assessed
• Additional file 8 of Maternal age affects equine day 8 embryo gene expression both in trophoblast and inner cell mass ↗

  Figshare · 2022
  not yet assessed
• Tissue damage induces a conserved stress response that initiates quiescent muscle stem cell activation ↗

  Cell stem cell · 2021 · PMID 33609440
  not yet assessed
• The CovR regulatory network drives the evolution of Group B Streptococcus virulence ↗

  PLoS Genetics · 2021 · PMID 34491998
  not yet assessed
• Mosquito‐bacteria interactions during larval development trigger metabolic changes with carry‐over effects on adult fitness ↗

  Molecular Ecology · 2021 · PMID 34905257
  not yet assessed
• HP1γ binding pre-mRNA intronic repeats modulates RNA splicing decisions ↗

  EMBO Reports · 2021 · PMID 34312949
  not yet assessed
• Queuine Is a Nutritional Regulator of Entamoeba histolytica Response to Oxidative Stress and a Virulence Attenuator ↗

  mBio · 2021 · PMID 33688012
  not yet assessed
• Functional Genomic and Biochemical Analysis Reveals Pleiotropic Effect of Congo Red on Aspergillus fumigatus ↗

  mBio · 2021 · PMID 34006660
  not yet assessed
• SIV-induced terminally differentiated adaptive NK cells in lymph nodes associated with enhanced MHC-E restricted activity ↗

  Nature Communications · 2021 · PMID 33627642
  not yet assessed
• Systemic viral spreading and defective host responses are associated with fatal Lassa fever in macaques ↗

  Communications Biology · 2021 · PMID 33398113
  not yet assessed
• Aspergillus fumigatus, One Uninucleate Species with Disparate Offspring ↗

  Journal of Fungi · 2021 · PMID 33419224
  not yet assessed
• Early Transcriptional Changes in Rabies Virus-Infected Neurons and Their Impact on Neuronal Functions ↗

  Frontiers in Microbiology · 2021 · PMID 34970230
  not yet assessed
• The oxidative stress response of pathogenic Leptospira is controlled by two peroxide stress regulators which putatively cooperate in controlling virulence ↗

  PLoS Pathogens · 2021 · PMID 34855911
  not yet assessed
• Transcriptional adaptation of <i>Mycobacterium ulcerans</i> in an original mouse model: New insights into the regulation of mycolactone ↗

  Virulence · 2021 · PMID 34107844
  not yet assessed
• CD32+CD4+ T Cells Sharing B Cell Properties Increase With Simian Immunodeficiency Virus Replication in Lymphoid Tissues ↗

  Frontiers in Immunology · 2021 · PMID 34220857
  not yet assessed
• sgDI-tector: defective interfering viral genome bioinformatics for detection of coronavirus subgenomic RNAs ↗

  RNA · 2021 · PMID 34937774
  not yet assessed
• Role of the major determinant of polar flagellation FlhG in the endoflagella‐containing spirochete <i>Leptospira</i> ↗

  Molecular Microbiology · 2021 · PMID 34657338
  not yet assessed
• Mosquito-bacteria interactions during larval development trigger metabolic changes with carry-over effects on adult fitness ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2021
  not yet assessed
• Maternal age affects equine Day 8 embryo gene expression both in trophoblast and inner cell mass ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2021
  not yet assessed
• Experimental evolution reveals post-transcriptional regulation as a novel driver of <i>Leishmania</i> fitness gain ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2021
  not yet assessed
• The CovR regulatory network drives the evolution of Group B <i>Streptococcus</i> virulence ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2021
  not yet assessed
• Maternal parity affects Day 8 embryo gene expression in old mares ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2021
  not yet assessed
• ChIPflow: from raw data to epigenomic dynamics ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2021
  not yet assessed
• La mémoire immunitaire innée des cellules épithéliales bronchiques ↗

  Revue des Maladies Respiratoires · 2021
  not yet assessed
• sgDI-tector: defective interfering viral genome bioinformatics for detection of coronavirus subgenomic RNAs ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2021
  not yet assessed
• Tissue damage induces a conserved stress response that initiates quiescent muscle stem cell activation

  HAL (Le Centre pour la Communication Scientifique Directe) · 2021
  not yet assessed
• Transcriptional adaptation of <i>Mycobacterium ulcerans</i> in an original mouse model: New insights into the regulation of mycolactone ↗

  Figshare · 2021
  not yet assessed
• Intracellular Staphylococcus aureus persisters upon antibiotic exposure ↗

  Nature Communications · 2020 · PMID 32366839
  not yet assessed
• Functionally distinct resident macrophage subsets differentially shape responses to infection in the bladder ↗

  Science Advances · 2020 · PMID 33239294
  not yet assessed
• 4-Methylcytosine DNA modification is critical for global epigenetic regulation and virulence in the human pathogen <i>Leptospira interrogans</i>

  Nucleic Acids Research · 2020 · PMID 33301041
  L1 78/100
• Transcytosis subversion by M cell-to-enterocyte spread promotes Shigella flexneri and Listeria monocytogenes  intracellular bacterial dissemination ↗

  PLoS Pathogens · 2020 · PMID 32282860
  not yet assessed
• The transcriptional response of pathogenic Leptospira to peroxide reveals new defenses against infection-related oxidative stress ↗

  PLoS Pathogens · 2020 · PMID 33021995
  not yet assessed
• BAHD1 haploinsufficiency results in anxiety-like phenotypes in male mice ↗

  PLoS ONE · 2020 · PMID 32407325
  not yet assessed
• Insights into amebiasis using a human<scp>3D</scp>‐intestinal model ↗

  Cellular Microbiology · 2020 · PMID 32175652
  not yet assessed
• Functionally distinct resident macrophage subsets differentially shape responses to infection in the bladder ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2020
  not yet assessed
• Skeletal Muscle Tissue Damage Leads to a Conserved Stress Response and Stem Cell-Specific Adaptive Transitions ↗

  SSRN Electronic Journal · 2020
  not yet assessed
• The adaptive transcriptional response of pathogenic <i>Leptospira</i> to peroxide reveals new defenses against infection-related oxidative stress ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2020
  not yet assessed
• Queuine is a nutritional regulator of <i>Entamoeba histolytica</i> response to oxidative stress and a virulence attenuator ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2020
  not yet assessed
• The oxidative stress response of pathogenic <i>Leptospira</i> is controlled by two peroxide stress regulators which putatively cooperate in controlling virulence ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2020
  not yet assessed
• Human Immune Response Triggered by Entamoeba histolytica in a 3D-Intestinal Model ↗

  2020
  not yet assessed
• Mycobacterium abscessus virulence traits unraveled by transcriptomic profiling in amoeba and macrophages ↗

  PLoS Pathogens · 2019 · PMID 31703112
  not yet assessed
• Transcriptional profiling of a laboratory and clinical Mycobacterium tuberculosis strain suggests respiratory poisoning upon exposure to delamanid ↗

  Tuberculosis · 2019 · PMID 31378263
  not yet assessed
• Non-specific interference of cobalt with siderophore-dependent iron uptake pathways ↗

  Metallomics · 2019 · PMID 31633703
  not yet assessed
• Mycobacterium abscessus virulence traits unraveled by transcriptomic profiling in amoeba and macrophages ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2019
  not yet assessed
• Y-RNAs Lead an Endogenous Program of RIG-I Agonism Mobilized upon RNA Virus Infection and Targeted by HIV ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2019
  not yet assessed
• HP1γ binding pre-mRNA at intronic repeats increases splicing fidelity and regulates alternative exon usage ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2019
  not yet assessed
• Enteric bacteria boost defences against oxidative stress in Entamoeba histolytica ↗

  Scientific Reports · 2018 · PMID 29899530
  not yet assessed
• Enzymatic synthesis of random sequences of RNA and RNA analogues by DNA polymerase theta mutants for the generation of aptamer libraries ↗

  Nucleic Acids Research · 2018 · PMID 29788485
  not yet assessed
• Sequanix: a dynamic graphical interface for Snakemake workflows ↗

  Bioinformatics · 2018 · PMID 29361152
  not yet assessed
• Bioconvert: a collaborative bioinformatics format converter library ↗

  Faculty of 1000 Research Ltd · 2018
  not yet assessed
• In Situ Fixation Redefines Quiescence and Early Activation of Skeletal Muscle Stem Cells ↗

  Cell Reports · 2017 · PMID 29141227
  not yet assessed
• A missense variant in the coil1A domain of the keratin 25 gene is associated with the dominant curly hair coat trait (Crd) in horse ↗

  Genetics Selection Evolution · 2017 · PMID 29141579
  not yet assessed
• 'Sequana': a Set of Snakemake NGS pipelines ↗

  The Journal of Open Source Software · 2017
  not yet assessed
• Sequanix: A Dynamic Graphical Interface for Snakemake Workflows ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2017
  not yet assessed
• Sequanix: a dynamic graphical interface for Snakemake workflows ↗

  Faculty of 1000 Research Ltd · 2017
  not yet assessed
• MOESM1 of A missense variant in the coil1A domain of the keratin 25 gene is associated with the dominant curly hair coat trait (Crd) in horse ↗

  Figshare · 2017
  not yet assessed
• GH16 and GH81 family β-(1,3)-glucanases in<i>Aspergillus fumigatus</i>are essential for conidial cell wall morphogenesis ↗

  Cellular Microbiology · 2016 · PMID 27306610
  not yet assessed
• Global translational impacts of the loss of the tRNA modification t6A in yeast ↗

  Microbial Cell · 2015 · PMID 26798630
  not yet assessed
• RiboTools: a Galaxy toolbox for qualitative ribosome profiling analysis ↗

  Bioinformatics · 2015 · PMID 25812744
  not yet assessed
• Translation Analysis at the Genome Scale by Ribosome Profiling ↗

  Methods in molecular biology · 2015 · PMID 26483019
  not yet assessed
• VING: a software for visualization of deep sequencing signals ↗

  BMC Research Notes · 2015 · PMID 26346985
  not yet assessed
• Genome-wide Translational Changes Induced by the Prion [PSI+] ↗

  Cell Reports · 2014 · PMID 25043188
  not yet assessed
• Next-generation sequencing identifies equine cartilage and subchondral bone miRNAs and suggests their involvement in osteochondrosis physiopathology ↗

  BMC Genomics · 2014 · PMID 25227120
  not yet assessed
• Involvement of mitochondrial dysfunction and ER-stress in the physiopathology of equine osteochondritis dissecans (OCD) ↗

  Experimental and Molecular Pathology · 2014 · PMID 24657499
  not yet assessed
• Profiling of microRNAs coded by mitochondrion in different equine tissues

  HAL (Le Centre pour la Communication Scientifique Directe) · 2014
  not yet assessed
• Design of a custom equine microRNA expression microarray using RNAseq data analysis of various equine tissues

  HAL (Le Centre pour la Communication Scientifique Directe) · 2014
  not yet assessed
• Le séquençage du récepteur de la TSH (TSHR) des singes : un outil pour étudier les relations structures-fonction ↗

  Annales d Endocrinologie · 2013
  not yet assessed
• MicroRNA identification and pattern expression in equine skeletal muscles, heart and liver determined by small RNA deep sequencing

  HAL (Le Centre pour la Communication Scientifique Directe) · 2013
  not yet assessed
• MicroRNAs identification and pattern expression in equine skeletal muscles, heart and liver determined by RNA deep sequencing

  HAL (Le Centre pour la Communication Scientifique Directe) · 2013
  not yet assessed
• Evolution of Class A G-Protein-Coupled Receptors: Implications for Molecular Modeling ↗

  Current Medicinal Chemistry · 2012 · PMID 22300045
  not yet assessed
• Hyperstructure interactions influence the virulence of the type 3 secretion system in yersiniae and other bacteria ↗

  Applied Microbiology and Biotechnology · 2012 · PMID 22949045
  not yet assessed
• [Where do surgical possibilities stop in the treatment of pulmonary tuberculosis?]. ↗

  PubMed · 1965 · PMID 5860809
  not yet assessed
• [The renewal of autonomous speleotomy]. ↗

  PubMed · 1962 · PMID 13929277
  not yet assessed
• [Valve-like bronchogenic cyst in an infant]. ↗

  PubMed · 1957 · PMID 13449282
  not yet assessed
• [Results of surgical treatment of borderline cases of pulmonary tuberculosis in the sanatorium]. ↗

  PubMed · 1954 · PMID 14385605
  not yet assessed
• Extrapleural pneumothorax and thoracoplasty. ↗

  PubMed · 1949 · PMID 18117957
  not yet assessed
• The puncture of pleural and extrapleural effusions by the suprascapular route and the upper axillary approach in the declining position. ↗

  PubMed · 1947 · PMID 18897843
  not yet assessed