Micha Bayer

The share of this author’s assessed papers carrying a ⚑ flag. A concentration is a prompt for expert review — never, on its own, a determination about the person.

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How this author’s assessed papers reproduced — the outcome of reproduction attempts, not a judgement of the person. Coverage is partial and grows over time.

Assessed papers (1)

• BaRTv2: a highly resolved barley reference transcriptome for accurate transcript-specific RNA-seq quantification.
  2022 L1 94/100

1 assessed by us (1 reproduced) · 117 not yet assessed — every PubMed paper on record, linked below.

• Postdomestication selection of MKK3 shaped seed dormancy and end-use traits in barley. ↗

  Apollo (University of Cambridge) · 2026
  not yet assessed
• Partitioning phenotypic variation: implications for morphometric analyses (Bryozoa) ↗

  2026
  not yet assessed
• EORNA v.2 barley gene and transcript abundance dataset ↗

  Zenodo (CERN European Organization for Nuclear Research) · 2026
  not yet assessed
• EORNA v.2 barley gene and transcript abundance dataset ↗

  Zenodo (CERN European Organization for Nuclear Research) · 2026
  not yet assessed
• EORNA v.2: a gene and transcript abundance database and website ↗

  Zenodo (CERN European Organization for Nuclear Research) · 2026
  not yet assessed
• EORNA v.2: a gene and transcript abundance database and website ↗

  Zenodo (CERN European Organization for Nuclear Research) · 2026
  not yet assessed
• Phased potato genome assembly and association genetics enable delineation of the H1 resistance locus against potato cyst nematodes ↗

  Theoretical and Applied Genetics · 2026 · PMID 41817712
  not yet assessed
• EoRNA2: Autonomous Data Discovery and Processing for Databasing of Gene Expression Data ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2026
  not yet assessed
• Barley <scp>HvBODYGUARD1</scp> controls cuticular specialisations regulated by <scp>SHINE</scp> transcription factors ↗

  New Phytologist · 2026 · PMID 42203758
  not yet assessed
• A barley pan-transcriptome reveals layers of genotype-dependent transcriptional complexity ↗

  Nature Genetics · 2025 · PMID 39901014
  not yet assessed
• Postdomestication selection of MKK3 shaped seed dormancy and end-use traits in barley ↗

  Science · 2025 · PMID 41196947
  not yet assessed
• Striking convergent selection history of wheat and barley and its potential for breeding ↗

  Nature Plants · 2025 · PMID 41254200
  not yet assessed
• New loci and candidate genes in spring two-rowed barley detected through meta-analysis of a field trial European network ↗

  Theoretical and Applied Genetics · 2025 · PMID 40549197
  not yet assessed
• Environmental DNA Reveals Reykjavík’s Human and Ecological History ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2025
  not yet assessed
• Correction: HISS: Snakemake-based workflows for performing SMRT-RenSeq assembly, AgRenSeq and dRenSeq for the discovery of novel plant disease resistance genes ↗

  BMC Bioinformatics · 2025 · PMID 39920604
  not yet assessed
• Post-Domestication selection of MKK3 Shaped Seed Dormancy and End-Use Traits in Barley ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2025
  not yet assessed
• A genus-wide pangenome of Hordeum ↗

  Research Square · 2025
  not yet assessed
• Barley BODYGUARD controls cuticular specialisations regulated by SHINE transcription factors ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2025
  not yet assessed
• Phased Potato Genome Assembly and Association Genetics Enable Characterisation of the Elusive H1 Resistance Locus Against Potato Cyst Nematodes ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2025
  not yet assessed
• Author Correction: Striking convergent selection history of wheat and barley and its potential for breeding ↗

  Nature Plants · 2025 · PMID 41286486
  not yet assessed
• Structural variation in the pangenome of wild and domesticated barley ↗

  Nature · 2024 · PMID 39537924
  not yet assessed
• Adaptive diversification through structural variation in barley ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2024
  not yet assessed
• A barley pan-transcriptome reveals layers of genotype-dependent transcriptional complexity ↗

  Research Square · 2024
  not yet assessed
• SMRT–AgRenSeq-d in potato ( <i>Solanum tuberosum</i> ) as a method to identify candidates for the nematode resistance Gpa5 ↗

  Horticulture Research · 2023 · PMID 38023472
  not yet assessed
• HISS: Snakemake-based workflows for performing SMRT-RenSeq assembly, AgRenSeq and dRenSeq for the discovery of novel plant disease resistance genes ↗

  BMC Bioinformatics · 2023 · PMID 37198529
  not yet assessed
• <scp>BaRTv2</scp> : a highly resolved barley reference transcriptome for accurate transcript‐specific <scp>RNA</scp> ‐seq quantification

  The Plant Journal · 2022 · PMID 35704392
  L1 94/100
• Conserved signalling components coordinate epidermal patterning and cuticle deposition in barley ↗

  Nature Communications · 2022 · PMID 36229435
  not yet assessed
• The evolutionary patterns of barley pericentromeric chromosome regions, as shaped by linkage disequilibrium and domestication ↗

  The Plant Journal · 2022 · PMID 35834607
  not yet assessed
• Genome-Wide Association Study for Resistance to Rhynchosporium in a Diverse Collection of Spring Barley Germplasm ↗

  Agronomy · 2022
  not yet assessed
• HISS: Snakemake-based workflows for performing SMRT-RenSeq assembly, AgRenSeq and dRenSeq for the discovery of novel plant disease resistance genes ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2022
  not yet assessed
• SMRT-AgRenSeq-d in potato (Solanum tuberosum) identifies candidates for the nematode resistance Gpa5 ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2022
  not yet assessed
• The evolutionary patterns of barley pericentromeric chromosome regions, as shaped by linkage disequilibrium and domestication ↗

  Zenodo (CERN European Organization for Nuclear Research) · 2022
  not yet assessed
• The evolutionary patterns of barley pericentromeric chromosome regions, as shaped by linkage disequilibrium and domestication ↗

  Zenodo (CERN European Organization for Nuclear Research) · 2022
  not yet assessed
• Referee report. For: Recommendations for the formatting of Variant Call Format (VCF) files to make plant genotyping data FAIR [version 1; peer review: 2 approved with reservations] ↗

  Faculty of 1000 Research Ltd · 2022
  not yet assessed
• Referee report. For: Recommendations for the formatting of Variant Call Format (VCF) files to make plant genotyping data FAIR [version 2; peer review: 1 approved, 1 approved with reservations] ↗

  Faculty of 1000 Research Ltd · 2022
  not yet assessed
• EORNA, a barley gene and transcript abundance database ↗

  Scientific Data · 2021 · PMID 33767193
  not yet assessed
• BaRTv2: A highly resolved barley reference transcriptome for accurate transcript-specific RNA-seq quantification ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2021
  not yet assessed
• Barley sodium content is regulated by natural variants of the Na+ transporter HvHKT1;5 ↗

  Communications Biology · 2020 · PMID 32444849
  not yet assessed
• Characterisation of barley landraces from Syria and Jordan for resistance to rhynchosporium and identification of diagnostic markers for Rrs1Rh4 ↗

  Theoretical and Applied Genetics · 2020 · PMID 31965232
  not yet assessed
• EoRNA, a barley gene and transcript abundance database ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2020
  not yet assessed
• A Grain of Salt ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2020
  not yet assessed
• EoRNA, a barley gene and transcript abundance database ↗

  Zenodo (CERN European Organization for Nuclear Research) · 2020
  not yet assessed
• EoRNA, a barley gene and transcript abundance database ↗

  Zenodo (CERN European Organization for Nuclear Research) · 2020
  not yet assessed
• Supplementary Information Natural variants of HvHKT1;5 regulate sodium content in barley.pdf ↗

  Figshare · 2020
  not yet assessed
• BaRTv1.0: an improved barley reference transcript dataset to determine accurate changes in the barley transcriptome using RNA-seq ↗

  BMC Genomics · 2019 · PMID 31829136
  not yet assessed
• BaRTv1.0: an improved barley reference transcript dataset to determine accurate changes in the barley transcriptome using RNA-seq ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2019
  not yet assessed
• BaRTv1.0: an improved barley reference transcript dataset to determine accurate changes in the barley transcriptome using RNA-seq ↗

  Figshare · 2019
  not yet assessed
• Development of the Cockpit-UI/UX of the Taycan in an Agile Way – Less is More ↗

  VDI Verlag eBooks · 2019
  not yet assessed
• BaRTv1.0: an improved barley reference transcript dataset to determine accurate changes in the barley transcriptome using RNA-seq ↗

  Zenodo (CERN European Organization for Nuclear Research) · 2019
  not yet assessed
• MOESM1 of BaRTv1.0: an improved barley reference transcript dataset to determine accurate changes in the barley transcriptome using RNA-seq ↗

  Figshare · 2019
  not yet assessed
• Identification and rapid mapping of a gene conferring broad-spectrum late blight resistance in the diploid potato species Solanum verrucosum through DNA capture technologies ↗

  Theoretical and Applied Genetics · 2018 · PMID 29560514
  not yet assessed
• Characterisation of barley resistance to rhynchosporium on chromosome 6HS ↗

  Theoretical and Applied Genetics · 2018 · PMID 30547184
  not yet assessed
• <i>ELIGULUM-A</i> Regulates Lateral Branch and Leaf Development in Barley ↗

  PLANT PHYSIOLOGY · 2018 · PMID 29440592
  not yet assessed
• Exome Capture for Variant Discovery and Analysis in Barley ↗

  Methods in molecular biology · 2018 · PMID 30460572
  not yet assessed
• Gene Prediction in the Barley Genome ↗

  Compendium of plant genomes · 2018
  not yet assessed
• The Expressed Portion of the Barley Genome ↗

  Compendium of plant genomes · 2018
  not yet assessed
• A chromosome conformation capture ordered sequence of the barley genome ↗

  Nature · 2017 · PMID 28447635
  not yet assessed
• Development and Evaluation of a Barley 50k iSelect SNP Array ↗

  Frontiers in Plant Science · 2017 · PMID 29089957
  not yet assessed
• Association Mapping of Diastatic Power in UK Winter and Spring Barley by Exome Sequencing of Phenotypically Contrasting Variety Sets ↗

  Frontiers in Plant Science · 2017 · PMID 28955358
  not yet assessed
• Construction of a map-based reference genome sequence for barley, Hordeum vulgare L. ↗

  Scientific Data · 2017 · PMID 28448065
  not yet assessed
• A genome wide analysis of key genes controlling diastatic power activity in UK barley (DPGENES)

  2017
  not yet assessed
• Exome sequencing of geographically diverse barley landraces and wild relatives gives insights into environmental adaptation ↗

  Nature Genetics · 2016 · PMID 27428750
  not yet assessed
• Chromatin state analysis of the barley epigenome reveals a higher‐order structure defined by H3K27me1 and H3K27me3 abundance ↗

  The Plant Journal · 2015 · PMID 26255869
  not yet assessed
• Tablet: Visualizing Next-Generation Sequence Assemblies and Mappings ↗

  Methods in molecular biology · 2015 · PMID 26519411
  not yet assessed
• An investigation of causes of false positive single nucleotide polymorphisms using simulated reads from a small eukaryote genome ↗

  BMC Bioinformatics · 2015 · PMID 26558718
  not yet assessed
• WHIRLY1 Functions in the Control of Responses to Nitrogen Deficiency But Not Aphid Infestation in Barley ↗

  PLANT PHYSIOLOGY · 2015 · PMID 25944826
  not yet assessed
• Baker et al Plant Journal 2014

  2015
  not yet assessed
• Additional file 1 of An investigation of causes of false positive single nucleotide polymorphisms using simulated reads from a small eukaryote genome ↗

  Figshare · 2015
  not yet assessed
• An evaluation of genotyping by sequencing (GBS) to map the Breviaristatum-e (ari-e) locus in cultivated barley ↗

  BMC Genomics · 2014 · PMID 24498911
  not yet assessed
• The low‐recombining pericentromeric region of barley restricts gene diversity and evolution but not gene expression ↗

  The Plant Journal · 2014 · PMID 24947331
  not yet assessed
• Genome-Tagged Amplification (GTA): a PCR-based method to prepare sample-tagged amplicons from hundreds of individuals for next generation sequencing ↗

  Molecular Breeding · 2014
  not yet assessed
• In silico identification and characterization of conserved plant microRNAs in barley ↗

  Open Life Sciences · 2014
  not yet assessed
• From Rhynchosporium commune genome sequence to barley resistance

  Rothamsted Repository (Rothamsted Repository) · 2014
  not yet assessed
• On the path of discovery: Rhynchosporium commune effectors activating scald resistance in barley.

  2014
  not yet assessed
• The use of genotyping by sequencing in blackcurrant (Ribes nigrum): developing high-resolution linkage maps in species without reference genome sequences ↗

  Molecular Breeding · 2013
  not yet assessed
• A physical, genetic and functional sequence assembly of the barley genome ↗

  Nature · 2012 · PMID 23075845
  not yet assessed
• Using Tablet for visual exploration of second-generation sequencing data ↗

  Briefings in Bioinformatics · 2012 · PMID 22445902
  not yet assessed
• Natural variation in a homolog of Antirrhinum CENTRORADIALIS contributed to spring growth habit and environmental adaptation in cultivated barley ↗

  Nature Genetics · 2012 · PMID 23160098
  not yet assessed
• Towards an understanding of the nature of resistance to Phytophthora root rot in red raspberry ↗

  Theoretical and Applied Genetics · 2011 · PMID 21573956
  not yet assessed
• Comparative visualization of genetic and physical maps with Strudel ↗

  Bioinformatics · 2011 · PMID 21372085
  not yet assessed
• Identification, utilisation and mapping of novel transcriptome-based markers from blackcurrant (Ribes nigrum) ↗

  BMC Plant Biology · 2011 · PMID 22035129
  not yet assessed
• Highly Parallel Gene-To-BAC Addressing Using Microarrays ↗

  BioTechniques · 2011 · PMID 21486237
  not yet assessed
• Flapjack—graphical genotype visualization ↗

  Bioinformatics · 2010 · PMID 20956241
  not yet assessed
• An eQTL Analysis of Partial Resistance to Puccinia hordei in Barley ↗

  PLoS ONE · 2010 · PMID 20066049
  not yet assessed
• Tablet—next generation sequence assembly visualization ↗

  Bioinformatics · 2009 · PMID 19965881
  not yet assessed
• TOPALi v2: a rich graphical interface for evolutionary analyses of multiple alignments on HPC clusters and multi-core desktops ↗

  Bioinformatics · 2008 · PMID 18984599
  not yet assessed
• New methods for preparing, imaging and typifying desmids (Chlorophyta, Zygnematophyceae), including extended depth of focus and 3-D reconstruction ↗

  Phycologia · 2007
  not yet assessed
• Grid infrastructures for secure access to and use of bioinformatics data: experiences from the BRIDGES project ↗

  2006
  not yet assessed
• CONTROLLING THE CHAOS: DEVELOPING POST-GENOMIC GRID INFRASTRUCTURES ↗

  2006
  not yet assessed
• Automatic diatom identification using contour analysis by morphological curvature scale spaces ↗

  Machine Vision and Applications · 2005
  not yet assessed
• Diatom recognition by convex and concave contour curvature ↗

  2005
  not yet assessed
• Development of a Grid Infrastructure for Functional Genomics ↗

  Lecture notes in computer science · 2005
  not yet assessed
• Distributed BLAST in a Grid Computing Context ↗

  Lecture notes in computer science · 2005
  not yet assessed
• Security infrastructure for grid-enabled biomedical services

  ENLIGHTEN (Jurnal Bimbingan dan Konseling Islam) · 2005
  not yet assessed
• The Sellaphora pupula species complex (Bacillariophyceae): morphometric analysis, ultrastructure and mating data provide evidence for five new species ↗

  Phycologia · 2004
  not yet assessed
• Diatom classification in ecological applications ↗

  Pattern Recognition · 2004
  not yet assessed
• Grid services supporting the usage of secure federated, distributed biomedical data

  Minerva Access (University of Melbourne) · 2004
  not yet assessed
• Development of a Grid Infrastructure for Functional Genomics

  2004
  not yet assessed
• Diatom identification: a double challenge called ADIAC ↗

  2003
  not yet assessed
• Automatic landmarking for building biological shape models ↗

  Proceedings - International Conference on Image Processing · 2003
  not yet assessed
• Automatic Diatom Identification ↗

  Series in machine perception and artificial intelligence · 2002
  not yet assessed
• Modelling life cycle related and individual shape variation in biological specimens ↗

  2002
  not yet assessed
• HUMAN ERROR AND QUALITY ASSURANCE IN DIATOM ANALYSIS ↗

  Series in machine perception and artificial intelligence · 2002
  not yet assessed
• Diatom contour analysis using morphological curvature scale spaces ↗

  2002
  not yet assessed
• ADIAC ACHIEVEMENTS AND FUTURE WORK ↗

  Series in machine perception and artificial intelligence · 2002
  not yet assessed
• INTRODUCTION TO ADIAC AND THIS BOOK ↗

  Series in machine perception and artificial intelligence · 2002
  not yet assessed
• BACK MATTER ↗

  Series in machine perception and artificial intelligence · 2002
  not yet assessed
• FRONT MATTER ↗

  Series in machine perception and artificial intelligence · 2002
  not yet assessed
• Digital microscopy in phycological research, with special reference to microalgae ↗

  Phycological Research · 2001
  not yet assessed
• Digital microscopy in phycological research, with special reference to microalgae ↗

  Phycological Research · 2001
  not yet assessed
• Design and Construction of a Simulator for Testing Finger Joint Replacements - Konzeption und Erstellung eines Simulators zur Testung von Fingergelenkendoprothesen ↗

  Biomedizinische Technik/Biomedical Engineering · 2001 · PMID 11458771
  not yet assessed
• 15TH INTERNATIONAL CONFERENCE ON PATTERN RECOGNITION, VOL 3, PROCEEDINGS

  2000
  not yet assessed
• Partitioning phenotypic variation: genotypic, environmental and residual components from bryozoan skeletal morphology ↗

  Journal of Natural History · 1999
  not yet assessed
• Genetic determinism, inducible morphology and phenotypic plasticity in the marine bryozoan Èlectra pilosa' (L.)

  St Andrews Research Repository (St Andrews Research Repository) · 1998
  not yet assessed
• Wave–related abrasion induces formation of extended spines in a marine bryozoan ↗

  Proceedings of the Royal Society B Biological Sciences · 1997
  not yet assessed
• Evidence for Zooid Senescence in the Marine Bryozoan Electra pilosa ↗

  Invertebrate Biology · 1997
  not yet assessed
• Influence of food concentration on polypide regression in the marine bryozoan Electra pilosa (L.) (Bryozoa: Cheilostomata) ↗

  Journal of Experimental Marine Biology and Ecology · 1994
  not yet assessed
• Studies on the Bionomics of Silphini. V.

  1930
  not yet assessed