Craig G. Simpson

The share of this author’s assessed papers carrying a ⚑ flag. A concentration is a prompt for expert review — never, on its own, a determination about the person.

Collaborators, sized by shared output and coloured by their own reproducibility (green = high, red = low). Click a node to open their card. A pattern is a prompt for review, never a determination.

How this author’s assessed papers reproduced — the outcome of reproduction attempts, not a judgement of the person. Coverage is partial and grows over time.

Assessed papers (1)

• BaRTv2: a highly resolved barley reference transcriptome for accurate transcript-specific RNA-seq quantification.
  2022 L1 94/100

1 assessed by us (1 reproduced) · 129 not yet assessed — every PubMed paper on record, linked below.

• EORNA v.2 barley gene and transcript abundance dataset ↗

  Zenodo (CERN European Organization for Nuclear Research) · 2026
  not yet assessed
• EORNA v.2 barley gene and transcript abundance dataset ↗

  Zenodo (CERN European Organization for Nuclear Research) · 2026
  not yet assessed
• EoRNA2: Autonomous Data Discovery and Processing for Databasing of Gene Expression Data ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2026
  not yet assessed
• A barley pan-transcriptome reveals layers of genotype-dependent transcriptional complexity ↗

  Nature Genetics · 2025 · PMID 39901014
  not yet assessed
• Genetic suppression features ABHD18 as a Barth syndrome therapeutic target ↗

  Nature · 2025 · PMID 40903572
  not yet assessed
• Hormonal and transcriptomic regulation of drought adaptation in barley roots and leaves ↗

  Scientific Reports · 2025 · PMID 40350502
  not yet assessed
• A Comparison of Three Analytic Methods to Detect Cardiopulmonary Exercise Testing Metabolic Thresholds Using Heart Rate Data ↗

  American Journal of Respiratory and Critical Care Medicine · 2025
  not yet assessed
• Transcriptional response to Phytophthora root rot in raspberry identifies <i>RiABP19</i> , a Germin-like protein (GLP) gene with a putative role in resistance ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2025
  not yet assessed
• Structural variation in the pangenome of wild and domesticated barley ↗

  Nature · 2024 · PMID 39537924
  not yet assessed
• The cap-binding complex modulates ABA-responsive transcript splicing during germination in barley (Hordeum vulgare) ↗

  Scientific Reports · 2024 · PMID 39107424
  not yet assessed
• The IEMI Effect: On the Efficacy of PCB-Level Countermeasures in Adversarial Environments ↗

  2024
  not yet assessed
• Adaptive diversification through structural variation in barley ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2024
  not yet assessed
• A barley pan-transcriptome reveals layers of genotype-dependent transcriptional complexity ↗

  Research Square · 2024
  not yet assessed
• Screening of Nias World Rice Core Collection for Seeds with Long Longevity as Useful Potential Breeding Materials Focusing on the Stability of Embryonic RNAs ↗

  Preprints.org · 2024
  not yet assessed
• Silencing of a raspberry homologue of <i>VRN1</i> is associated with disruption of dormancy induction and misregulation of subsets of dormancy-associated genes ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2024
  not yet assessed
• Screening of NIAS World Rice Core Collection for Seeds with Long Longevity as Useful Potential Breeding Materials Focusing on the Stability of Embryonic RNAs ↗

  Plants · 2024 · PMID 38999709
  not yet assessed
• Altered expression of a raspberry homologue of <i>VRN1</i> is associated with disruption of dormancy induction and misregulation of subsets of dormancy-associated genes ↗

  Journal of Experimental Botany · 2024 · PMID 39243357
  not yet assessed
• Genomic signatures of barley breeding for environmental adaptation to the new continents ↗

  Plant Biotechnology Journal · 2023 · PMID 37497741
  not yet assessed
• Multi-mode Control of the Energy Transfer Unit in Capacitively-coupled Hybrid Battery Packs for Enhanced Auxiliary DC Bus Regulation ↗

  2023
  not yet assessed
• Touch of Evil ↗

  2023
  not yet assessed
• <scp>BaRTv2</scp> : a highly resolved barley reference transcriptome for accurate transcript‐specific <scp>RNA</scp> ‐seq quantification

  The Plant Journal · 2022 · PMID 35704392
  L1 94/100
• Multi-Loop Control of Hybrid Li-ion Battery Packs Using the Auxiliary DC Bus for State-of-Charge Regulation ↗

  2022 IEEE Energy Conversion Congress and Exposition (ECCE) · 2022
  not yet assessed
• EORNA, a barley gene and transcript abundance database ↗

  Scientific Data · 2021 · PMID 33767193
  not yet assessed
• BaRTv2: A highly resolved barley reference transcriptome for accurate transcript-specific RNA-seq quantification ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2021
  not yet assessed
• The Effect of Drought on Transcriptome and Hormonal Profiles in Barley Genotypes With Contrasting Drought Tolerance ↗

  Frontiers in Plant Science · 2020 · PMID 33424910
  not yet assessed
• Nonsense-Mediated RNA Decay Factor UPF1 Is Critical for Posttranscriptional and Translational Gene Regulation in Arabidopsis ↗

  The Plant Cell · 2020 · PMID 32665305
  not yet assessed
• The SERRATE protein is involved in alternative splicing in Arabidopsis thaliana ↗

  Nucleic Acids Research · 2020
  not yet assessed
• Venular amyloid and its relationship with cerebral amyloid angiopathy in TGF344AD rats ↗

  Alzheimer s & Dementia · 2020
  not yet assessed
• Editorial: Alternative Splicing Regulation in Plants ↗

  Frontiers in Plant Science · 2020 · PMID 32733504
  not yet assessed
• Nonsense mediated RNA decay factor UPF1 is critical for post-transcriptional and translational gene regulation in Arabidopsis ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2020
  not yet assessed
• EoRNA, a barley gene and transcript abundance database ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2020
  not yet assessed
• EoRNA, a barley gene and transcript abundance database ↗

  Zenodo (CERN European Organization for Nuclear Research) · 2020
  not yet assessed
• Issues Concerning the Definition of ‘Placing on the Market’ Under Regulation (EC) No 178/2002

  2020
  not yet assessed
• EoRNA, a barley gene and transcript abundance database ↗

  Zenodo (CERN European Organization for Nuclear Research) · 2020
  not yet assessed
• Light Regulates Plant Alternative Splicing through the Control of Transcriptional Elongation ↗

  Molecular Cell · 2019 · PMID 30661982
  not yet assessed
• BaRTv1.0: an improved barley reference transcript dataset to determine accurate changes in the barley transcriptome using RNA-seq ↗

  BMC Genomics · 2019 · PMID 31829136
  not yet assessed
• BaRTv1.0: an improved barley reference transcript dataset to determine accurate changes in the barley transcriptome using RNA-seq ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2019
  not yet assessed
• BaRTv1.0: an improved barley reference transcript dataset to determine accurate changes in the barley transcriptome using RNA-seq ↗

  Figshare · 2019
  not yet assessed
• BaRTv1.0: an improved barley reference transcript dataset to determine accurate changes in the barley transcriptome using RNA-seq ↗

  Zenodo (CERN European Organization for Nuclear Research) · 2019
  not yet assessed
• MOESM1 of BaRTv1.0: an improved barley reference transcript dataset to determine accurate changes in the barley transcriptome using RNA-seq ↗

  Figshare · 2019
  not yet assessed
• Enhancement of Glen Moy x Latham raspberry linkage map using GbS to further understand control of developmental processes leading to fruit ripening ↗

  BMC Genetics · 2018 · PMID 30111279
  not yet assessed
• How does temperature affect splicing events? Isoform switching of splicing factors regulates splicing of <i>LATE ELONGATED HYPOCOTYL</i> (<i>LHY</i>) ↗

  Plant Cell & Environment · 2018 · PMID 29532482
  not yet assessed
• Developmental Transitions to Fruiting in Red Raspberry ↗

  Compendium of plant genomes · 2018
  not yet assessed
• QTL Mapping and Marker Assisted Breeding in Rubus spp. ↗

  2018
  not yet assessed
• High-Resolution RT-PCR Analysis of Alternative Barley Transcripts ↗

  Methods in molecular biology · 2018 · PMID 30460571
  not yet assessed
• Light remote control of alternative splicing in roots through TOR kinase ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2018
  not yet assessed
• The Expressed Portion of the Barley Genome ↗

  Compendium of plant genomes · 2018
  not yet assessed
• Eye of The Beholder

  2017
  not yet assessed
• The Arabidopsis SR45 Splicing Factor, a Negative Regulator of Sugar Signaling, Modulates SNF1-Related Protein Kinase 1 Stability ↗

  The Plant Cell · 2016 · PMID 27436712
  not yet assessed
• Alternative Splicing of Barley Clock Genes in Response to Low Temperature ↗

  PLoS ONE · 2016 · PMID 27959947
  not yet assessed
• Mapping and expression of genes associated with raspberry fruit ripening and softening ↗

  Theoretical and Applied Genetics · 2016 · PMID 27942774
  not yet assessed
• Monitoring Alternative Splicing Changes in Arabidopsis Circadian Clock Genes ↗

  Methods in molecular biology · 2016 · PMID 26867620
  not yet assessed
• Data Protection under Food Law Post the Novel Foods Regulation

  2016
  not yet assessed
• The spliceosome assembly factor GEMIN2 attenuates the effects of temperature on alternative splicing and circadian rhythms ↗

  Proceedings of the National Academy of Sciences · 2015 · PMID 26170331
  not yet assessed
• At<scp>RTD</scp> – a comprehensive reference transcript dataset resource for accurate quantification of transcript‐specific expression in <i>Arabidopsis thaliana</i> ↗

  New Phytologist · 2015 · PMID 26111100
  not yet assessed
• Lost in Translation: Pitfalls in Deciphering Plant Alternative Splicing Transcripts ↗

  The Plant Cell · 2015 · PMID 26286536
  not yet assessed
• Balance board rehabilitation device for ankle proprioception assessment ↗

  2015
  not yet assessed
• The application of an audited self-management approach to manage nutrient losses in the Hurunui River catchment. ↗

  University of Canterbury Research Repository (University of Canterbury) · 2015
  not yet assessed
• Long Noncoding RNA Modulates Alternative Splicing Regulators in Arabidopsis ↗

  Developmental Cell · 2014 · PMID 25073154
  not yet assessed
• A Chloroplast Retrograde Signal Regulates Nuclear Alternative Splicing ↗

  Science · 2014 · PMID 24763593
  not yet assessed
• Arabidopsis <scp>PTB</scp>1 and <scp>PTB</scp>2 proteins negatively regulate splicing of a mini‐exon splicing reporter and affect alternative splicing of endogenous genes differentially ↗

  New Phytologist · 2014 · PMID 24749484
  not yet assessed
• Grader agreement, and sensitivity and specificity of digital photography in a community optometry-based diabetic eye screening program ↗

  Clinical ophthalmology · 2014 · PMID 25114496
  not yet assessed
• Physiological, biochemical and molecular responses of the potato (<i><scp>S</scp>olanum tuberosum</i> <scp>L</scp>.) plant to moderately elevated temperature ↗

  Plant Cell & Environment · 2013 · PMID 23889235
  not yet assessed
• The SERRATE protein is involved in alternative splicing in Arabidopsis thaliana ↗

  Nucleic Acids Research · 2013 · PMID 24137006
  not yet assessed
• Small changes in ambient temperature affect alternative splicing in<i>Arabidopsis thaliana</i> ↗

  Plant Signaling & Behavior · 2013 · PMID 23656882
  not yet assessed
• An hnRNP-like RNA-binding protein affects alternative splicing by in vivo interaction with transcripts in Arabidopsis thaliana ↗

  Nucleic Acids Research · 2012 · PMID 23042250
  not yet assessed
• Mutation of <i>Arabidopsis SPLICEOSOMAL TIMEKEEPER LOCUS1</i> Causes Circadian Clock Defects ↗

  The Plant Cell · 2012 · PMID 23110899
  not yet assessed
• Transcriptome survey reveals increased complexity of the alternative splicing landscape in <i>Arabidopsis</i> ↗

  Genome Research · 2012 · PMID 22391557
  not yet assessed
• Monitoring Changes in Plant Alternative Splicing Events ↗

  2012
  not yet assessed
• <i>In Vivo</i> Analysis of Plant Intron Splicing ↗

  2012
  not yet assessed
• European Union Emergency Measures Against Third Country Imports under Regulation 178/2002: 10 Years on

  2012
  not yet assessed
• Alternative splicing and nonsense-mediated decay modulate expression of important regulatory genes in Arabidopsis ↗

  Nucleic Acids Research · 2011 · PMID 22127866
  not yet assessed
• INTERMEDIUM-C, a modifier of lateral spikelet fertility in barley, is an ortholog of the maize domestication gene TEOSINTE BRANCHED 1 ↗

  Nature Genetics · 2011 · PMID 21217754
  not yet assessed
• A novel RNA binding protein localized in nuclear speckles regulates auxin-induced differential splicing in Arabidopsis thaliana

  Dépôt institutionnel de l'Université libre de Bruxelles (Université Libre de Bruxelles) · 2011
  not yet assessed
• A methyl transferase links the circadian clock to the regulation of alternative splicing ↗

  Nature · 2010 · PMID 20962777
  not yet assessed
• Regulation of plant gene expression by alternative splicing ↗

  Biochemical Society Transactions · 2010 · PMID 20298240
  not yet assessed
• Dynamic Behavior of<i>Arabidopsis</i>eIF4A-III, Putative Core Protein of Exon Junction Complex: Fast Relocation to Nucleolus and Splicing Speckles under Hypoxia ↗

  The Plant Cell · 2009 · PMID 19435936
  not yet assessed
• Aberrant mRNA Transcripts and the Nonsense-Mediated Decay Proteins UPF2 and UPF3 Are Enriched in the <i>Arabidopsis</i> Nucleolus   ↗

  The Plant Cell · 2009 · PMID 19602621
  not yet assessed
• Involvement of the nuclear cap-binding protein complex in alternative splicing in Arabidopsis thaliana ↗

  Nucleic Acids Research · 2009 · PMID 19864257
  not yet assessed
• Unusual Autofluorescence in a Case of Cancer Associated Retinopathy (CAR)

  2009
  not yet assessed
• Alternative splicing in plants ↗

  Biochemical Society Transactions · 2008 · PMID 18481991
  not yet assessed
• U12-Dependent Intron Splicing in Plants ↗

  Current topics in microbiology and immunology · 2008 · PMID 18630747
  not yet assessed
• Monitoring changes in alternative precursor messenger RNA splicing in multiple gene transcripts ↗

  The Plant Journal · 2007 · PMID 18088312
  not yet assessed
• Amplification of chloroplast DNA using the polymerase chain reaction (PCR): a practical activity for secondary school students ↗

  Journal of Biological Education · 2006
  not yet assessed
• Modified Air Circulation: Energy Savings and Indoor Air Quality

  NPARC · 2006
  not yet assessed
• Determinants of Plant U12-Dependent Intron Splicing Efficiency ↗

  The Plant Cell · 2004 · PMID 15100401
  not yet assessed
• Dual functionality of a plant U‐rich intronic sequence element ↗

  The Plant Journal · 2003 · PMID 14675434
  not yet assessed
• Primer Extension Assay ↗

  Humana Press eBooks · 2003 · PMID 8563810
  not yet assessed
• RNase A/T&lt;SUB&gt;1&lt;/SUB&gt; Protection Assay ↗

  Humana Press eBooks · 2003 · PMID 8563809
  not yet assessed
• Applications of RT-PCR ↗

  Humana Press eBooks · 2003 · PMID 8563811
  not yet assessed
• Cloning and characterization of two subunits of Arabidopsis thaliana nuclear cap-binding complex ↗

  Gene · 2002 · PMID 11867224
  not yet assessed
• Mutational analysis of a plant branchpoint and polypyrimidine tract required for constitutive splicing of a mini-exon ↗

  RNA · 2002 · PMID 11873758
  not yet assessed
• Mutagenesis of key amino acids alters activity of a<i>Saccharomyces cerevisiae</i>endo-polygalacturonase expressed in<i>Pichia pastoris</i> ↗

  FEMS Microbiology Letters · 2002 · PMID 12044673
  not yet assessed
• Splicing signals and factors in plant intron removal ↗

  Biochemical Society Transactions · 2002 · PMID 12023842
  not yet assessed
• Plant intron splicing ↗

  Biochemical Society Transactions · 2002
  not yet assessed
• Expression of intron-containing GUS constructs is reduced due to activation of a cryptic 5′ splice site ↗

  Molecular Genetics and Genomics · 2001 · PMID 11405628
  not yet assessed
• Multiple snoRNA gene clusters from Arabidopsis. ↗

  PubMed · 2001 · PMID 11780637
  not yet assessed
• Splicing signals and factors in plant intron removal ↗

  Biochemical Society Transactions · 2001
  not yet assessed
• Requirements for mini-exon inclusion in potato invertase mRNAs provides evidence for exon-scanning interactions in plants ↗

  RNA · 2000 · PMID 10744026
  not yet assessed
• Interactions between introns via exon definition in plant pre‐mRNA splicing ↗

  The Plant Journal · 1999
  not yet assessed
• SPLICE SITE SELECTION IN PLANT PRE-mRNA SPLICING ↗

  Annual Review of Plant Physiology and Plant Molecular Biology · 1998 · PMID 15012228
  not yet assessed
• Repeated removal of copper by alginate beads and the enhancement by microalgae ↗

  Biotechnology Techniques · 1998
  not yet assessed
• Characterization of exon skipping mutants of the <i>COP1</i> gene from <i>Arabidopsis</i> ↗

  The Plant Journal · 1998 · PMID 9744100
  not yet assessed
• Removal of Copper by Free and Immobilized Microalga, Chlorella vulgaris ↗

  1998
  not yet assessed
• Processing of vertebrate box C/D small nucleolar RNAs in plant cells ↗

  European Journal of Biochemistry · 1998 · PMID 9578473
  not yet assessed
• Use of histopathology in the practice of necropsy. ↗

  Journal of Clinical Pathology · 1998 · PMID 9659279
  not yet assessed
• cDNA cloning and expression of polygalacturonaseinhibiting proteins (PGIPs) from red raspberry (<i>Rubus idaeus</i>) ↗

  Journal of Experimental Botany · 1997
  not yet assessed
• Expression of intron modified NPT II genes in monocotyledonous and dicotyledonous plant cells ↗

  Molecular Breeding · 1997
  not yet assessed
• Arabidopsis consensus intron sequences ↗

  Plant Molecular Biology · 1996 · PMID 8980502
  not yet assessed
• Mutation of putative branchpoint consensus sequences in plant introns reduces splicing efficiency ↗

  The Plant Journal · 1996 · PMID 8919913
  not yet assessed
• Phraseology in quality assurance reports. ↗

  Journal of Clinical Pathology · 1996 · PMID 8881931
  not yet assessed
• Genetic analysis of DNA fingerprints and virulences in Erysiphe graminis f.sp. hordei ↗

  Current Genetics · 1994 · PMID 8001173
  not yet assessed
• Pain, blood loss, and death from leaking abdominal aortic aneurysms. ↗

  Journal of Clinical Pathology · 1994 · PMID 7848451
  not yet assessed
• Complementary deletions in expressed potato U2snRNA gene variants support the hypothesis that stem—loop IIb is dispensable for splicing ↗

  The Plant Journal · 1994 · PMID 7849760
  not yet assessed
• Efficient splicing of an AU-rich antisense intron sequence ↗

  Plant Molecular Biology · 1993 · PMID 7678764
  not yet assessed
• Adaptation of barley powdery mildew populations in England to varieties with two resistance genes ↗

  Plant Pathology · 1993
  not yet assessed
• Human olfactory marker protein maps close to tyrosinase and is a candidate gene for Usher syndrome type I ↗

  Human Molecular Genetics · 1993 · PMID 8499899
  not yet assessed
• CHARACTERISTICS OF PLANT PRE-mRNA INTRONS AND TRANSPOSABLE ELEMENTS ↗

  Elsevier eBooks · 1993
  not yet assessed
• Plant pre-m RNA splicing and splicing components ↗

  Philosophical Transactions of the Royal Society B Biological Sciences · 1993 · PMID 8115450
  not yet assessed
• Detection of antisense transcripts in transgenic plants by RT—PCR ↗

  The Plant Journal · 1993 · PMID 8275105
  not yet assessed
• External quality assessment. ↗

  Journal of Clinical Pathology · 1992 · PMID 1517471
  not yet assessed
• Splicing of plant pre-mRNAs ↗

  Proceedings of the Royal Society of Edinburgh Section B Biological Sciences · 1992
  not yet assessed
• Rapid analysis of plant gene expression by a novel reverse transcriptase‐PCR method ↗

  The Plant Journal · 1992
  not yet assessed
• Expression analysis of multigene families by RT-PCR ↗

  Nucleic Acids Research · 1992 · PMID 1280813
  not yet assessed
• Regional chromosomal assignment of the human platelet phosphofructokinase gene to 10p15 ↗

  Human Genetics · 1992 · PMID 1533608
  not yet assessed
• The use of DNA polymorphisms to test hypotheses about a population of <i>Erysiphe graminis</i> f.sp. hordei ↗

  Plant Pathology · 1990
  not yet assessed
• Functional and psychosocial effects of multimodality limb-sparing therapy in patients with soft tissue sarcomas. ↗

  Journal of Clinical Oncology · 1989 · PMID 2671282
  not yet assessed
• Molecular variation in populations of Erysiphe graminis on barley, oats and rye ↗

  Plant Pathology · 1989
  not yet assessed
• Cost effectiveness of postmortem histology. ↗

  Journal of Clinical Pathology · 1987 · PMID 3121681
  not yet assessed
• Fatal pulmonary fibrosis occurring during treatment with cyclophosphamide. ↗

  BMJ · 1982 · PMID 6809197
  not yet assessed