A.C. Bouwman

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Assessed papers (1)

• Meta-analysis of six dairy cattle breeds reveals biologically relevant candidate genes for mastitis resistance.⚑
  2024 L1 69/100 ⚑

1 assessed by us (0 reproduced) · 100 not yet assessed — every PubMed paper on record, linked below.

• Genome-wide meta-analyses in 708,480 individuals shed light on the genetic conflict between productivity and fertility in dairy cattle ↗

  Research Square · 2026
  not yet assessed
• Untangling the Copy Number Variation at the Basis of Belted Phenotypes in Cattle Using Long‐Read Sequencing ↗

  Animal Genetics · 2026 · PMID 42466792
  not yet assessed
• Comparative evaluation of phenotypic, pedigree, and family-based selection in insect breeding using stochastic simulation ↗

  animal · 2025 · PMID 40117713
  not yet assessed
• BugBook: Genetics of insects as food and feed ↗

  Journal of Insects as Food and Feed · 2025
  not yet assessed
• Utilizing low-pass sequence data to study the impact of structural variants on polygenic traits ↗

  Research Square · 2025
  not yet assessed
• Meta-analysis of six dairy cattle breeds reveals biologically relevant candidate genes for mastitis resistance⚑

  Genetics Selection Evolution · 2024 · PMID 39009986
  L1 69/100 ⚑
• <scp>genomeprofile</scp>: Unveiling the genomic profile for livestock breeding through comprehensive <scp>SNP</scp> array‐based genotyping ↗

  Animal Genetics · 2024 · PMID 39021305
  not yet assessed
• Within and across population genomic predictions incorporating functional genomic annotations

  Socio-Environmental Systems Modeling · 2024
  not yet assessed
• Invited review: Good practices in genome-wide association studies to identify candidate sequence variants in dairy cattle ↗

  Journal of Dairy Science · 2023 · PMID 37349208
  not yet assessed
• Automated pose estimation reveals walking characteristics associated with lameness in broilers ↗

  Poultry Science · 2023 · PMID 37302328
  not yet assessed
• High-resolution structural variants catalogue in a large-scale whole genome sequenced bovine family cohort data ↗

  BMC Genomics · 2023 · PMID 37127590
  not yet assessed
• Tracking individual broilers on video in terms of time and distance ↗

  Poultry Science · 2023 · PMID 37980741
  not yet assessed
• Screening of in vitro-produced cattle embryos to assess incidence and characteristics of unbalanced chromosomal aberrations ↗

  JDS Communications · 2023 · PMID 36974223
  not yet assessed
• Identification and characterisation of de novo germline structural variants in two commercial pig lines using trio-based whole genome sequencing ↗

  BMC Genomics · 2023 · PMID 37072725
  not yet assessed
• Classifying aneuploidy in genotype intensity data using deep learning ↗

  Journal of Animal Breeding and Genetics · 2023 · PMID 36806175
  not yet assessed
• The rate of de novo structural variation is increased in in vitro–produced offspring and preferentially affects the paternal genome ↗

  Genome Research · 2023 · PMID 37793781
  not yet assessed
• Additional file 1 of Identification and characterisation of de novo germline structural variants in two commercial pig lines using trio-based whole genome sequencing ↗

  Open MIND · 2023
  not yet assessed
• Additional file 2 of High-resolution structural variants catalogue in a large-scale whole genome sequenced bovine family cohort data ↗

  Open MIND · 2023
  not yet assessed
• Full-sib group records as a practical alternative to individual records in insect breeding

  Socio-Environmental Systems Modeling · 2023
  not yet assessed
• Passive radio frequency identification and video tracking for the determination of location and movement of broilers ↗

  Poultry Science · 2022 · PMID 36621101
  not yet assessed
• Selection and Drift: A Comparison between Historic and Recent Dutch Friesian Cattle and Recent Holstein Friesian Using WGS Data ↗

  Animals · 2022 · PMID 35158654
  not yet assessed
• 613. Genetic parameters of black soldier flies estimated in full sib design ↗

  2022
  not yet assessed
• High-resolution structural variation catalogue in a large-scale whole genome sequenced bovine family cohort data ↗

  Research Square · 2022
  not yet assessed
• 542. Rare CNVs in the bovine genome are not captured well by 50K density genotyping array SNPs ↗

  2022
  not yet assessed
• 562. Detection and characterisation of <i>de novo</i> structural variants in pigs ↗

  2022
  not yet assessed
• 122. Automated individual walking distance of group-housed broilers: a comparison between ground-truth, RFID, and video ↗

  2022
  not yet assessed
• 612. Impact of genetic selection in insect populations using different selection designs – a simulation study ↗

  2022
  not yet assessed
• 280. Accuracy of genomic prediction of dry matter intake in Dutch Holsteins using sequence variants from meta-analyses ↗

  2022
  not yet assessed
• 128. Automated estimation of pose features in broilers using computer vision ↗

  2022
  not yet assessed
• A 12 kb multi-allelic copy number variation encompassing a GC gene enhancer is associated with mastitis resistance in dairy cattle ↗

  PLoS Genetics · 2021 · PMID 34288907
  not yet assessed
• Across-Species Pose Estimation in Poultry Based on Images Using Deep Learning ↗

  Frontiers in Animal Science · 2021
  not yet assessed
• A 12 kb multi-allelic copy number variation encompassing a GC gene enhancer is associated with mastitis resistance in dairy cattle ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2021
  not yet assessed
• Pedigree-based de novo rate estimation for structural variation in the cattle germline

  Socio-Environmental Systems Modeling · 2021
  not yet assessed
• 131 deeply sequenced cattle trios reveal parent-of-origin effects in de novo structural variations

  Socio-Environmental Systems Modeling · 2021
  not yet assessed
• Functional and population genetic features of copy number variations in two dairy cattle populations ↗

  BMC Genomics · 2020 · PMID 31992181
  not yet assessed
• Using prior information from humans to prioritize genes and gene-associated variants for complex traits in livestock ↗

  PLoS Genetics · 2020 · PMID 32925905
  not yet assessed
• Automated Step Detection in Inertial Measurement Unit Data From Turkeys ↗

  Frontiers in Genetics · 2020 · PMID 32265981
  not yet assessed
• A deterministic equation to predict the accuracy of multi-population genomic prediction with multiple genomic relationship matrices ↗

  Genetics Selection Evolution · 2020 · PMID 32345213
  not yet assessed
• Using short read sequencing to characterise balanced reciprocal translocations in pigs ↗

  BMC Genomics · 2020 · PMID 32831014
  not yet assessed
• Using prior information from humans to prioritize genes and gene-associated variants for complex traits in livestock ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2020
  not yet assessed
• Using short read sequencing to characterise balanced reciprocal translocations in pigs ↗

  Research Square · 2020
  not yet assessed
• Functional and population genetic features of copy number variations in two dairy cattle populations ↗

  Research Square · 2020
  not yet assessed
• Classifying true and false reciprocal translocation breakpoints from whole genome sequence data using deep learning

  Data Archiving and Networked Services (DANS) · 2020
  not yet assessed
• Use of technologies to phenotype livestock for improved welfare and reduced environmental impact

  Socio-Environmental Systems Modeling · 2020
  not yet assessed
• Exploiting genetic variation in insect populations

  Socio-Environmental Systems Modeling · 2020
  not yet assessed
• Using short read sequencing to characterise balanced reciprocal translocations in pigs ↗

  Research Square · 2020
  not yet assessed
• Using Short Read Sequencing to Characterise Balanced Reciprocal Translocations in Pigs ↗

  Research Square · 2020
  not yet assessed
• Functional and population genetic features of copy number variations in two dairy cattle populations ↗

  Research Square · 2020
  not yet assessed
• Additional file 2 of Functional and population genetic features of copy number variations in two dairy cattle populations ↗

  Open MIND · 2020
  not yet assessed
• Imputation to whole-genome sequence using multiple pig populations and its use in genome-wide association studies ↗

  Genetics Selection Evolution · 2019 · PMID 30678638
  not yet assessed
• Genetic parameters for atypical reproductive patterns in dairy cows estimated from in-line milk progesterone profiles ↗

  Journal of Dairy Science · 2019 · PMID 31606217
  not yet assessed
• Common genomic regions underlie height in humans and stature in cattle

  Socio-Environmental Systems Modeling · 2019
  not yet assessed
• Functional and population genetic features of copy number variations in two dairy cattle populations ↗

  Research Square · 2019
  not yet assessed
• P99 Recurrent melanoma after pregnancy and assisted reproductive technology ↗

  International Journal of Gynecological Cancer · 2019
  not yet assessed
• Detection of reciprocal translocations using short read sequencing

  Socio-Environmental Systems Modeling · 2019
  not yet assessed
• Detection of reciprocal translocations in pigs using short read sequencing

  Socio-Environmental Systems Modeling · 2019
  not yet assessed
• Functional and population genetic features of copy number variations in two dairy cattle populations ↗

  Research Square · 2019
  not yet assessed
• Functional and population genetic features of copy number variations in two dairy cattle populations ↗

  Research Square · 2019
  not yet assessed
• MOESM1 of Imputation to whole-genome sequence using multiple pig populations and its use in genome-wide association studies ↗

  Figshare · 2019
  not yet assessed
• Steps of turkey's

  Socio-Environmental Systems Modeling · 2019
  not yet assessed
• Meta-analysis of genome-wide association studies for cattle stature identifies common genes that regulate body size in mammals ↗

  Nature Genetics · 2018 · PMID 29459679
  not yet assessed
• Utility of whole-genome sequence data for across-breed genomic prediction ↗

  Genetics Selection Evolution · 2018 · PMID 29776327
  not yet assessed
• Genomic prediction for numerically small breeds, using models with pre-selected and differentially weighted markers ↗

  Genetics Selection Evolution · 2018 · PMID 30314431
  not yet assessed
• Improving accuracy of bulls' predicted genomic breeding values for fertility using daughters' milk progesterone profiles ↗

  Journal of Dairy Science · 2018 · PMID 29525306
  not yet assessed
• Genomic prediction across populations, using pre-selected markers and differential weight models

  Data Archiving and Networked Services (DANS) · 2018
  not yet assessed
• Imputation accuracy of whole-genome sequence in pigs

  Socio-Environmental Systems Modeling · 2018
  not yet assessed
• Meta-analysis of genome wide association studies for the stature of cattle reveals numerous common genes that regulate size in mammals

  Socio-Environmental Systems Modeling · 2018
  not yet assessed
• Turkey gait score measured with sensors

  Socio-Environmental Systems Modeling · 2018
  not yet assessed
• Estimated allele substitution effects underlying genomic evaluation models depend on the scaling of allele counts ↗

  Genetics Selection Evolution · 2017 · PMID 29084514
  not yet assessed
• Genomic prediction using preselected DNA variants from a GWAS with whole-genome sequence data in Holstein–Friesian cattle ↗

  Genetics Selection Evolution · 2016 · PMID 27905878
  not yet assessed
• Genome-wide association study for endocrine fertility traits using single nucleotide polymorphism arrays and sequence variants in dairy cattle ↗

  Journal of Dairy Science · 2016 · PMID 27157577
  not yet assessed
• Efficient genomic prediction based on whole-genome sequence data using split-and-merge Bayesian variable selection ↗

  Genetics Selection Evolution · 2016 · PMID 27357580
  not yet assessed
• Combining GWAS and Genomic Prediction using Sequence Information on 5000 Holstein Bulls, effect on Prediction Accuracy

  Socio-Environmental Systems Modeling · 2016
  not yet assessed
• MOESM7 of Genomic prediction using preselected DNA variants from a GWAS with whole-genome sequence data in Holsteinâ Friesian cattle ↗

  Figshare · 2016
  not yet assessed
• MOESM7 of Genomic prediction using preselected DNA variants from a GWAS with whole-genome sequence data in Holsteinâ Friesian cattle ↗

  Figshare · 2016
  not yet assessed
• MOESM5 of Genomic prediction using preselected DNA variants from a GWAS with whole-genome sequence data in Holsteinâ Friesian cattle ↗

  Figshare · 2016
  not yet assessed
• MOESM5 of Genomic prediction using preselected DNA variants from a GWAS with whole-genome sequence data in Holsteinâ Friesian cattle ↗

  Figshare · 2016
  not yet assessed
• Estimating genetic parameters for fertility in dairy cows from in-line milk progesterone profiles ↗

  Journal of Dairy Science · 2015 · PMID 26004838
  not yet assessed
• Comparing genomic prediction and GWAS with sequence information vs HD or 50k SNP chips

  Socio-Environmental Systems Modeling · 2015
  not yet assessed
• Meta-analysis of GWAS of bovine stature with >50,000 animals imputed to whole-genome sequence

  Socio-Environmental Systems Modeling · 2015
  not yet assessed
• Evaluation of measures of correctness of genotype imputation in the context of genomic prediction: a review of livestock applications ↗

  animal · 2014 · PMID 25045914
  not yet assessed
• Consequences of splitting whole-genome sequencing effort over multiple breeds on imputation accuracy ↗

  BMC Genetics · 2014 · PMID 25277486
  not yet assessed
• Exploring causal networks of bovine milk fatty acids in a multivariate mixed model context ↗

  Genetics Selection Evolution · 2014 · PMID 24438068
  not yet assessed
• Imputation of non-genotyped individuals based on genotyped relatives: assessing the imputation accuracy of a real case scenario in dairy cattle ↗

  Genetics Selection Evolution · 2014 · PMID 24490796
  not yet assessed
• Consequences of Splitting Sequencing Effort over Multiple Breeds on Imputation Accuracy

  Data Archiving and Networked Services (DANS) · 2014
  not yet assessed
• Genetic Parameters for Endocrine Fertility Traits from In-line Milk Progesterone Records in Dairy Cows

  Socio-Environmental Systems Modeling · 2014
  not yet assessed
• Unraveling the genetic background of bovine milk fat composition ↗

  2014
  not yet assessed
• Bos taurus strain:dairy beef (cattle): 1000 Bull Genomes Run 2, Bovine Whole Genome Sequence

  Socio-Environmental Systems Modeling · 2014
  not yet assessed
• Fine mapping of a quantitative trait locus for bovine milk fat composition on Bos taurus autosome 19 ↗

  Journal of Dairy Science · 2013 · PMID 24315323
  not yet assessed
• Genetic Variation in Vitamin B-12 Content of Bovine Milk and Its Association with SNP along the Bovine Genome ↗

  PLoS ONE · 2013 · PMID 23626813
  not yet assessed
• Imputation of non-genotyped individuals based on genotyped relatives: a real case scenario

  Socio-Environmental Systems Modeling · 2013
  not yet assessed
• Genetic correlation between composition of bovine milk fat in winter and summer, and DGAT1 and SCD1 by season interactions ↗

  Journal of Dairy Science · 2012 · PMID 23127906
  not yet assessed
• Genomic regions associated with bovine milk fatty acids in both summer and winter milk samples ↗

  BMC Genetics · 2012 · PMID 23107417
  not yet assessed
• Genome-wide association of milk fatty acids in Dutch dairy cattle ↗

  BMC Genetics · 2011 · PMID 21569316
  not yet assessed
• A Bayesian approach to detect QTL affecting a simulated binary and quantitative trait ↗

  BMC Proceedings · 2011 · PMID 21624174
  not yet assessed
• Maternal and social genetic effects on average daily gain of piglets from birth until weaning1 ↗

  Journal of Animal Science · 2010 · PMID 20495117
  not yet assessed
• Genome-wide scan to detect quantitative trait loci for milk urea nitrogen in Dutch Holstein-Friesian cows ↗

  Journal of Dairy Science · 2010 · PMID 20630247
  not yet assessed
• Genome-Wide Association Of The Ratio Of Saturated To Unsaturated Milk Fatty Acids In Dutch Dairy Cattle

  Socio-Environmental Systems Modeling · 2010
  not yet assessed
• The contribution of social effects to heritable variation in average daily gain of piglets from birth till weaning

  Socio-Environmental Systems Modeling · 2009
  not yet assessed
• ‘Ik wil graag van onthoornen af’ : Melkveehouder Mark Pijnenborg gaat voor minder ingrepen

  Data Archiving and Networked Services (DANS) · 2009
  not yet assessed
• Milk Genomics Initiative: research on exploiting 60,000 SNP information to genetic variation in fat composition of Bovine milk

  2008
  not yet assessed