Khai Luong

The share of this author’s assessed papers carrying a ⚑ flag. A concentration is a prompt for expert review — never, on its own, a determination about the person.

Collaborators, sized by shared output and coloured by their own reproducibility (green = high, red = low). Click a node to open their card. A pattern is a prompt for review, never a determination.

How this author’s assessed papers reproduced — the outcome of reproduction attempts, not a judgement of the person. Coverage is partial and grows over time.

Assessed papers (1)

• Detecting DNA modifications from SMRT sequencing data by modeling sequence context dependence of polymerase kinetic.⚑
  2013 L1 44/100 ⚑

1 assessed by us (0 reproduced) · 45 not yet assessed — every PubMed paper on record, linked below.

• Exploring Invisible New Physics with Exotic Pion Decays ↗

  arXiv (Cornell University) · 2026
  not yet assessed
• Exploring Invisible New Physics with Exotic Pion Decays

  arXiv (Cornell University) · 2026
  not yet assessed
• immunoPETE: A DNA-based integrated B-cell and T-cell receptor profiling platform ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2026
  not yet assessed
• Abstract 2595: A novel dual-strand whole-genome sequencing (WGS) method for ultra-sensitive molecular residual disease detection (MRD) ↗

  Cancer Research · 2026
  not yet assessed
• Comparison of a highly sensitive, tumor-informed Illumina whole genome sequencing research assay and a tumor-informed bespoke whole exome sequencing assay for molecular residual disease detection in CheckMate-77T (NCT 04025879). ↗

  Journal of Clinical Oncology · 2026
  not yet assessed
• ECGrav ↗

  Zenodo (CERN European Organization for Nuclear Research) · 2026
  not yet assessed
• ECGrav ↗

  Zenodo (CERN European Organization for Nuclear Research) · 2026
  not yet assessed
• ECGrav

  Open MIND · 2026
  not yet assessed
• ECGrav

  Open MIND · 2026
  not yet assessed
• ECGrav ↗

  Zenodo (CERN European Organization for Nuclear Research) · 2026
  not yet assessed
• ECGrav

  Open MIND · 2026
  not yet assessed
• Abstract 6292: Highly sensitive detection of circulating-tumor DNA in plasma using whole genome sequencing ↗

  Cancer Research · 2025
  not yet assessed
• The MEASURE Genome Atlas: Acute Myeloid Leukemia at diagnosis and complete remission ↗

  Blood · 2025
  not yet assessed
• Genomics of Acute Myeloid Leukemia at Diagnosis and Remission ↗

  medRxiv · 2025 · PMID 41404287
  not yet assessed
• A highly sensitive, low input, and automated assay for molecular residual disease detection (MRD) using whole-genome sequencing (WGS). ↗

  Journal of Clinical Oncology · 2024
  not yet assessed
• Global patterns of antigen receptor repertoire disruption across adaptive immune compartments in COVID-19 ↗

  Proceedings of the National Academy of Sciences · 2022 · PMID 35943978
  not yet assessed
• Highly multiplexed immune repertoire sequencing links multiple lymphocyte classes with severity of response to COVID-19 ↗

  EClinicalMedicine · 2022 · PMID 35600330
  not yet assessed
• Simultaneous sequencing of oxidized methylcytosines produced by TET/JBP dioxygenases in Coprinopsis cinerea ↗

  UNC Libraries · 2020
  not yet assessed
• Identification of a <i>Pseudomonas aeruginosa</i> PAO1 DNA Methyltransferase, Its Targets, and Physiological Roles ↗

  mBio · 2017 · PMID 28223461
  not yet assessed
• Comparative Genomics Reveals the Diversity of Restriction-Modification Systems and DNA Methylation Sites in Listeria monocytogenes ↗

  Applied and Environmental Microbiology · 2016 · PMID 27836852
  not yet assessed
• Genome-Wide Methylation Patterns in Salmonella enterica Subsp. enterica Serovars ↗

  PLoS ONE · 2015 · PMID 25860355
  not yet assessed
• Defining the sequence requirements for the positioning of base J in DNA using SMRT sequencing ↗

  Nucleic Acids Research · 2015 · PMID 25662217
  not yet assessed
• Summary of motifs and methyltransferases found in each &lt;i&gt;Salmonella&lt;/i&gt; genome. ↗

  Figshare · 2015
  not yet assessed
• Diagram of the interpulse duration (IPD) ratio of three novel motifs identified in three &lt;i&gt;Salmonella&lt;/i&gt; serovars. ↗

  Figshare · 2015
  not yet assessed
• Single-molecule sequencing to track plasmid diversity of hospital-associated carbapenemase-producing Enterobacteriaceae ↗

  Science Translational Medicine · 2014 · PMID 25232178
  not yet assessed
• Genomic mapping of phosphorothioates reveals partial modification of short consensus sequences ↗

  Nature Communications · 2014 · PMID 24899568
  not yet assessed
• Comparative Genomics of the Campylobacter lari Group ↗

  Genome Biology and Evolution · 2014 · PMID 25381664
  not yet assessed
• Simultaneous sequencing of oxidized methylcytosines produced by TET/JBP dioxygenases in <i>Coprinopsis cinerea</i> ↗

  Proceedings of the National Academy of Sciences · 2014 · PMID 25406324
  not yet assessed
• Fully Assembled Genome Sequence for Salmonella enterica subsp. <i>enterica</i> Serovar Javiana CFSAN001992 ↗

  Genome Announcements · 2014
  not yet assessed
• Genomic mapping of phosphorothioates reveals partial modification of short consensus sequences

  RePEc: Research Papers in Economics · 2014
  not yet assessed
• Neolithic mitochondrial haplogroup H genomes and the genetic origins of Europeans ↗

  Nature Communications · 2013 · PMID 23612305
  not yet assessed
• Enhanced 5-methylcytosine detection in single-molecule, real-time sequencing via Tet1 oxidation ↗

  BMC Biology · 2013 · PMID 23339471
  not yet assessed
• The complex methylome of the human gastric pathogen <i>Helicobacter pylori</i> ↗

  Nucleic Acids Research · 2013 · PMID 24302578
  not yet assessed
• Global methylation state at base-pair resolution of the <i>Caulobacter</i> genome throughout the cell cycle ↗

  Proceedings of the National Academy of Sciences · 2013 · PMID 24218615
  not yet assessed
• Comprehensive Methylome Characterization of Mycoplasma genitalium and Mycoplasma pneumoniae at Single-Base Resolution ↗

  PLoS Genetics · 2013 · PMID 23300489
  not yet assessed
• Detecting DNA Modifications from SMRT Sequencing Data by Modeling Sequence Context Dependence of Polymerase Kinetic⚑

  PLoS Computational Biology · 2013 · PMID 23516341
  L1 44/100 ⚑
• Exploring the Roles of DNA Methylation in the Metal-Reducing Bacterium Shewanella oneidensis MR-1 ↗

  Journal of Bacteriology · 2013 · PMID 23995632
  not yet assessed
• Fully Assembled Genome Sequence for Salmonella enterica subsp. <i>enterica</i> Serovar Javiana CFSAN001992 ↗

  Genome Announcements · 2013 · PMID 23516208
  not yet assessed
• Erratum: Corrigendum: Genome-wide mapping of methylated adenine residues in pathogenic Escherichia coli using single-molecule real-time sequencing ↗

  Nature Biotechnology · 2013
  not yet assessed
• Genome-wide mapping of methylated adenine residues in pathogenic Escherichia coli using single-molecule real-time sequencing ↗

  Nature Biotechnology · 2012 · PMID 23138224
  not yet assessed
• The methylomes of six bacteria ↗

  Nucleic Acids Research · 2012 · PMID 23034806
  not yet assessed
• A hybrid approach for the automated finishing of bacterial genomes ↗

  Nature Biotechnology · 2012 · PMID 22750883
  not yet assessed
• Live-Cell Imaging of Single Receptor Composition Using Zero-Mode Waveguide Nanostructures ↗

  Nano Letters · 2012 · PMID 22668081
  not yet assessed
• Genome Sequence of “Candidatus Microthrix parvicella” Bio17-1, a Long-Chain-Fatty-Acid-Accumulating Filamentous Actinobacterium from a Biological Wastewater Treatment Plant ↗

  Journal of Bacteriology · 2012 · PMID 23144412
  not yet assessed
• Modeling kinetic rate variation in third generation DNA sequencing data to detect putative modifications to DNA bases ↗

  Genome Research · 2012 · PMID 23093720
  not yet assessed
• Real-Time DNA Sequencing from Single Polymerase Molecules ↗

  Science · 2008 · PMID 19023044
  not yet assessed