Debashis Sahoo

The share of this author’s assessed papers carrying a ⚑ flag. A concentration is a prompt for expert review — never, on its own, a determination about the person.

Collaborators, sized by shared output and coloured by their own reproducibility (green = high, red = low). Click a node to open their card. A pattern is a prompt for review, never a determination.

How this author’s assessed papers reproduced — the outcome of reproduction attempts, not a judgement of the person. Coverage is partial and grows over time.

Assessed papers (4)

• Macrophages on the run: Exercise balances macrophage polarization for improved health.
  2024 L1 81/100
• Artificial intelligence-guided discovery of gastric cancer continuum.
  2023 L1 71/100
• COVID-19 lung disease shares driver AT2 cytopathic features with Idiopathic pulmonary fibrosis.
  2022 L1 85/100
• AI-assisted discovery of an ethnicity-influenced driver of cell transformation in esophageal and gastroesophageal junction adenocarcinomas.
  2022 L1 84/100

4 assessed by us (3 reproduced) · 272 not yet assessed — every PubMed paper on record, linked below.

• Catestatin ameliorates tauopathy and amyloidogenesis via adrenergic inhibition ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2026 · PMID 41509358
  not yet assessed
• AI guided discovery of a murine model of asymptomatic Alzheimer’s disease ↗

  Acta Neuropathologica Communications · 2026 · PMID 41935326
  not yet assessed
• Boolean Lab Heart Disease Dataset ↗

  Zenodo (CERN European Organization for Nuclear Research) · 2026
  not yet assessed
• Boolean Lab Heart Disease Dataset ↗

  Zenodo (CERN European Organization for Nuclear Research) · 2026
  not yet assessed
• Additional file 2 of AI guided discovery of a murine model of asymptomatic Alzheimer’s disease ↗

  Figshare · 2026
  not yet assessed
• Additional file 2 of AI guided discovery of a murine model of asymptomatic Alzheimer’s disease ↗

  Figshare · 2026
  not yet assessed
• Catestatin restores cardiac metabolic flexibility and enhances mitochondrial function ↗

  Communications Biology · 2026 · PMID 42177347
  not yet assessed
• Electrical stimulation promotes longevity and regeneration in a colonial chordate ↗

  Proceedings of the National Academy of Sciences · 2026 · PMID 42190017
  not yet assessed
• Performance Optimization and Comparative Analysis of Generative AI Models on Advanced Accelerators ↗

  arXiv (Cornell University) · 2026
  not yet assessed
• Performance Optimization and Comparative Analysis of Generative AI Models on Advanced Accelerators

  arXiv (Cornell University) · 2026
  not yet assessed
• <i>Rs_MEP1</i> Is Required for the Pathogenesis of <i>Rhizoctonia solani</i> AG1-IA in Plants ↗

  Molecular Plant-Microbe Interactions · 2026 · PMID 42535734
  not yet assessed
• Boolean Lab Survival Dataset ↗

  Zenodo (CERN European Organization for Nuclear Research) · 2026
  not yet assessed
• Boolean Lab Survival Dataset ↗

  Zenodo (CERN European Organization for Nuclear Research) · 2026
  not yet assessed
• Human skeletal development and regeneration are shaped by functional diversity of stem cells across skeletal sites ↗

  Cell stem cell · 2025 · PMID 40118065
  not yet assessed
• Bronchopulmonary dysplasia: signatures of monocyte-macrophage reactivity and tolerance define novel placenta-lung endotypes ↗

  Pediatric Research · 2025 · PMID 40175585
  not yet assessed
• Germline stem cell isolation, lineage tracing, and aging in a protochordate ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2025 · PMID 40949951
  not yet assessed
• The E2F4 transcriptional repressor is a key mechanistic regulator of colon cancer resistance to <i>irinotecan</i> (CPT-11) ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2025 · PMID 39896677
  not yet assessed
• Electrical Stimulation Rejuvenates Tunicates: Altered Stem Cell and Immune Activity ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2025 · PMID 40475539
  not yet assessed
• Boolean Network Modeling Identifies Cognitive Resilience in the First Murine Model of Asymptomatic Alzheimer’s Disease ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2025 · PMID 40661391
  not yet assessed
• Time-Restricted Feeding Attenuates Kidney Damage and Preserves Renal Function in Mouse Model of Chronic Kidney Disease ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2025
  not yet assessed
• Evaluation of data quality in childhood cancer survivor cohort: A 10-year review of the InPOG-LE-16-01 study ↗

  Pediatric Hematology Oncology Journal · 2025
  not yet assessed
• Data from Genome-Wide Association Study of Pregnancy in Childhood Cancer Survivors: A Report from the Childhood Cancer Survivor Study ↗

  2025
  not yet assessed
• Supplementary Figure from Genome-Wide Association Study of Pregnancy in Childhood Cancer Survivors: A Report from the Childhood Cancer Survivor Study ↗

  2025
  not yet assessed
• Macrophages on the run: Exercise balances macrophage polarization for improved health

  Molecular Metabolism · 2024 · PMID 39476967
  L1 81/100
• A living organoid biobank of patients with Crohn’s disease reveals molecular subtypes for personalized therapeutics ↗

  Cell Reports Medicine · 2024 · PMID 39332415
  not yet assessed
• Building Communication Efficient Asynchronous Peer-to-Peer Federated LLMs with Blockchain ↗

  Proceedings of the AAAI Symposium Series · 2024
  not yet assessed
• Methionine biosynthetic genes and methionine sulfoxide reductase A are required for <i>Rhizoctonia solani</i> <scp>AG1‐IA</scp> to cause sheath blight disease in rice ↗

  Microbial Biotechnology · 2024 · PMID 38568774
  not yet assessed
• The host and pathogen <i>myo</i> ‐inositol‐1‐phosphate synthases are required for <i>Rhizoctonia solani</i> <scp>AG1‐IA</scp> infection in tomato ↗

  Molecular Plant Pathology · 2024 · PMID 39376048
  not yet assessed
• Quantitative mRNA expression measurement at home ↗

  Scientific Reports · 2024 · PMID 38200031
  not yet assessed
• C1QA is an invariant biomarker for tissue macrophages ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2024 · PMID 38328228
  not yet assessed
• Molecular Signatures for Microbe-Associated Colorectal Cancers ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2024 · PMID 38853996
  not yet assessed
• Macrophage Polarizations in the Placenta and Lung are Associated with Bronchopulmonary Dysplasia ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2024 · PMID 38352616
  not yet assessed
• Bone Marrow Sampling in Aplastic Anemia and Neuroblastoma in Children and Adolescents: A Retrospective Data from a Single Tertiary Care Centre in Eastern India ↗

  Indian Journal of Hematology and Blood Transfusion · 2024 · PMID 41084539
  not yet assessed
• CPTQuant - A Novel Mixed Precision Post-Training Quantization Techniques for Large Language Models ↗

  arXiv (Cornell University) · 2024
  not yet assessed
• Rescue of Alzheimer’s disease phenotype in a mouse model by transplantation of wild-type hematopoietic stem and progenitor cells ↗

  Cell Reports · 2023 · PMID 37561625
  not yet assessed
• Machine learning identifies signatures of macrophage reactivity and tolerance that predict disease outcomes ↗

  EBioMedicine · 2023 · PMID 37516087
  not yet assessed
• Purification and functional characterization of novel human skeletal stem cell lineages ↗

  Nature Protocols · 2023 · PMID 37316563
  not yet assessed
• The DNA glycosylase NEIL2 is protective during SARS-CoV-2 infection ↗

  Nature Communications · 2023 · PMID 38071370
  not yet assessed
• Inverse agonists of retinoic acid receptor/retinoid X receptor signaling as lineage-specific antitumor agents against human adenoid cystic carcinoma ↗

  JNCI Journal of the National Cancer Institute · 2023 · PMID 37040084
  not yet assessed
• Clinicopathologic Significance of Heat Shock Protein 60 as a Survival Predictor in Colorectal Cancer ↗

  Cancers · 2023 · PMID 37627080
  not yet assessed
• Artificial intelligence-guided discovery of gastric cancer continuum

  Gastric Cancer · 2023 · PMID 36692601
  L1 71/100
• Identification of a novel gene signature for neuroblastoma differentiation using a Boolean implication network ↗

  Genes Chromosomes and Cancer · 2023 · PMID 36680522
  not yet assessed
• Investigating tumor-associated macrophages and their polarization in colorectal cancer using Boolean implication networks ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2023 · PMID 37577482
  not yet assessed
• A Living Organoid Biobank of Crohn’s Disease Patients Reveals Molecular Subtypes for Personalized Therapeutics ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2023 · PMID 36993763
  not yet assessed
• Data from Genomic and Proteomic Analysis Reveals a Threshold Level of MYC Required for Tumor Maintenance ↗

  2023
  not yet assessed
• Supplementary Figure 1 from Genomic and Proteomic Analysis Reveals a Threshold Level of MYC Required for Tumor Maintenance ↗

  2023
  not yet assessed
• Data from miR-221 Targets QKI to Enhance the Tumorigenic Capacity of Human Colorectal Cancer Stem Cells ↗

  2023
  not yet assessed
• Supplementary Figure 3 from Genomic and Proteomic Analysis Reveals a Threshold Level of MYC Required for Tumor Maintenance ↗

  2023
  not yet assessed
• Supplementary Figure 4 from Genomic and Proteomic Analysis Reveals a Threshold Level of MYC Required for Tumor Maintenance ↗

  2023
  not yet assessed
• Supplementary Figure 5 from Genomic and Proteomic Analysis Reveals a Threshold Level of MYC Required for Tumor Maintenance ↗

  2023
  not yet assessed
• Supplementary Figure 2 from Genomic and Proteomic Analysis Reveals a Threshold Level of MYC Required for Tumor Maintenance ↗

  2023
  not yet assessed
• Supplementary Figure 4 from Genomic and Proteomic Analysis Reveals a Threshold Level of MYC Required for Tumor Maintenance ↗

  2023
  not yet assessed
• Supplementary Methods from Genomic and Proteomic Analysis Reveals a Threshold Level of MYC Required for Tumor Maintenance ↗

  2023
  not yet assessed
• Supplementary Figure 1 from Genomic and Proteomic Analysis Reveals a Threshold Level of MYC Required for Tumor Maintenance ↗

  2023
  not yet assessed
• Supplementary Figure 3 from Genomic and Proteomic Analysis Reveals a Threshold Level of MYC Required for Tumor Maintenance ↗

  2023
  not yet assessed
• Supplementary Figure 6 from Genomic and Proteomic Analysis Reveals a Threshold Level of MYC Required for Tumor Maintenance ↗

  2023
  not yet assessed
• Supplementary Figure Legends 1-6, Tables 1-4 from Genomic and Proteomic Analysis Reveals a Threshold Level of MYC Required for Tumor Maintenance ↗

  2023
  not yet assessed
• Supplementary Figure 2 from Genomic and Proteomic Analysis Reveals a Threshold Level of MYC Required for Tumor Maintenance ↗

  2023
  not yet assessed
• Supplementary Figure 5 from Genomic and Proteomic Analysis Reveals a Threshold Level of MYC Required for Tumor Maintenance ↗

  2023
  not yet assessed
• Supplementary Appendix from miR-221 Targets QKI to Enhance the Tumorigenic Capacity of Human Colorectal Cancer Stem Cells ↗

  2023
  not yet assessed
• Figure S4 from miR-221 Targets QKI to Enhance the Tumorigenic Capacity of Human Colorectal Cancer Stem Cells ↗

  2023
  not yet assessed
• Figure S3 from miR-221 Targets QKI to Enhance the Tumorigenic Capacity of Human Colorectal Cancer Stem Cells ↗

  2023
  not yet assessed
• Figure S6 from miR-221 Targets QKI to Enhance the Tumorigenic Capacity of Human Colorectal Cancer Stem Cells ↗

  2023
  not yet assessed
• Figure S5 from miR-221 Targets QKI to Enhance the Tumorigenic Capacity of Human Colorectal Cancer Stem Cells ↗

  2023
  not yet assessed
• Table S2 from miR-221 Targets QKI to Enhance the Tumorigenic Capacity of Human Colorectal Cancer Stem Cells ↗

  2023
  not yet assessed
• Supplementary Appendix from miR-221 Targets QKI to Enhance the Tumorigenic Capacity of Human Colorectal Cancer Stem Cells ↗

  2023
  not yet assessed
• Supplementary Table S1 from Deep Sequencing of Urinary RNAs for Bladder Cancer Molecular Diagnostics ↗

  2023
  not yet assessed
• Supplementary Table S4 from Deep Sequencing of Urinary RNAs for Bladder Cancer Molecular Diagnostics ↗

  2023
  not yet assessed
• Supplementary Table S2 from Deep Sequencing of Urinary RNAs for Bladder Cancer Molecular Diagnostics ↗

  2023
  not yet assessed
• Supplementary Table S7 from Deep Sequencing of Urinary RNAs for Bladder Cancer Molecular Diagnostics ↗

  2023
  not yet assessed
• Supplementary Table S5 from Deep Sequencing of Urinary RNAs for Bladder Cancer Molecular Diagnostics ↗

  2023
  not yet assessed
• Supplementary Figure S1 from Deep Sequencing of Urinary RNAs for Bladder Cancer Molecular Diagnostics ↗

  2023
  not yet assessed
• Supplementary Table S2 from Deep Sequencing of Urinary RNAs for Bladder Cancer Molecular Diagnostics ↗

  2023
  not yet assessed
• Supplementary Table S3 from Deep Sequencing of Urinary RNAs for Bladder Cancer Molecular Diagnostics ↗

  2023
  not yet assessed
• Supplementary Table S6 from Deep Sequencing of Urinary RNAs for Bladder Cancer Molecular Diagnostics ↗

  2023
  not yet assessed
• Supplementary Table S7 from Deep Sequencing of Urinary RNAs for Bladder Cancer Molecular Diagnostics ↗

  2023
  not yet assessed
• Supplementary Table S1 from Deep Sequencing of Urinary RNAs for Bladder Cancer Molecular Diagnostics ↗

  2023
  not yet assessed
• Supplementary Table S5 from Deep Sequencing of Urinary RNAs for Bladder Cancer Molecular Diagnostics ↗

  2023
  not yet assessed
• Supplementary Table S4 from Deep Sequencing of Urinary RNAs for Bladder Cancer Molecular Diagnostics ↗

  2023
  not yet assessed
• Data from Deep Sequencing of Urinary RNAs for Bladder Cancer Molecular Diagnostics ↗

  2023
  not yet assessed
• Data from Deep Sequencing of Urinary RNAs for Bladder Cancer Molecular Diagnostics ↗

  2023
  not yet assessed
• Supplementary Table S6 from Deep Sequencing of Urinary RNAs for Bladder Cancer Molecular Diagnostics ↗

  2023
  not yet assessed
• Supplementary Figure S1 from Deep Sequencing of Urinary RNAs for Bladder Cancer Molecular Diagnostics ↗

  2023
  not yet assessed
• Supplementary Table S3 from Deep Sequencing of Urinary RNAs for Bladder Cancer Molecular Diagnostics ↗

  2023
  not yet assessed
• Figure S2 from miR-221 Targets QKI to Enhance the Tumorigenic Capacity of Human Colorectal Cancer Stem Cells ↗

  2023
  not yet assessed
• Supplementary Methods from Genomic and Proteomic Analysis Reveals a Threshold Level of MYC Required for Tumor Maintenance ↗

  2023
  not yet assessed
• Supplementary Figure 6 from Genomic and Proteomic Analysis Reveals a Threshold Level of MYC Required for Tumor Maintenance ↗

  2023
  not yet assessed
• Supplementary Figure Legends 1-6, Tables 1-4 from Genomic and Proteomic Analysis Reveals a Threshold Level of MYC Required for Tumor Maintenance ↗

  2023
  not yet assessed
• Figure S4 from miR-221 Targets QKI to Enhance the Tumorigenic Capacity of Human Colorectal Cancer Stem Cells ↗

  2023
  not yet assessed
• Figure S3 from miR-221 Targets QKI to Enhance the Tumorigenic Capacity of Human Colorectal Cancer Stem Cells ↗

  2023
  not yet assessed
• Figure S5 from miR-221 Targets QKI to Enhance the Tumorigenic Capacity of Human Colorectal Cancer Stem Cells ↗

  2023
  not yet assessed
• Supplementary Appendix from miR-221 Targets QKI to Enhance the Tumorigenic Capacity of Human Colorectal Cancer Stem Cells ↗

  2023
  not yet assessed
• Supplementary Appendix from miR-221 Targets QKI to Enhance the Tumorigenic Capacity of Human Colorectal Cancer Stem Cells ↗

  2023
  not yet assessed
• Figure S6 from miR-221 Targets QKI to Enhance the Tumorigenic Capacity of Human Colorectal Cancer Stem Cells ↗

  2023
  not yet assessed
• Table S2 from miR-221 Targets QKI to Enhance the Tumorigenic Capacity of Human Colorectal Cancer Stem Cells ↗

  2023
  not yet assessed
• Figure S1 from miR-221 Targets QKI to Enhance the Tumorigenic Capacity of Human Colorectal Cancer Stem Cells ↗

  2023
  not yet assessed
• Figure S2 from miR-221 Targets QKI to Enhance the Tumorigenic Capacity of Human Colorectal Cancer Stem Cells ↗

  2023
  not yet assessed
• Figure S1 from miR-221 Targets QKI to Enhance the Tumorigenic Capacity of Human Colorectal Cancer Stem Cells ↗

  2023
  not yet assessed
• Data from miR-221 Targets QKI to Enhance the Tumorigenic Capacity of Human Colorectal Cancer Stem Cells ↗

  2023
  not yet assessed
• Data from Genomic and Proteomic Analysis Reveals a Threshold Level of MYC Required for Tumor Maintenance ↗

  2023
  not yet assessed
• An Artificial Intelligence-guided signature reveals the shared host immune response in MIS-C and Kawasaki disease ↗

  Nature Communications · 2022 · PMID 35577777
  not yet assessed
• Hepatocyte Deletion of IGF2 Prevents DNA Damage and Tumor Formation in Hepatocellular Carcinoma ↗

  Advanced Science · 2022 · PMID 35615981
  not yet assessed
• COVID-19 lung disease shares driver AT2 cytopathic features with Idiopathic pulmonary fibrosis

  EBioMedicine · 2022 · PMID 35870428
  L1 85/100
• Effects of iron modulation on mesenchymal stem cell-induced drug resistance in estrogen receptor-positive breast cancer ↗

  Oncogene · 2022 · PMID 35732800
  not yet assessed
• Artificial intelligence-rationalized balanced PPARα/γ dual agonism resets dysregulated macrophage processes in inflammatory bowel disease ↗

  Communications Biology · 2022 · PMID 35288651
  not yet assessed
• AI-assisted discovery of an ethnicity-influenced driver of cell transformation in esophageal and gastroesophageal junction adenocarcinomas

  JCI Insight · 2022 · PMID 36134663
  L1 84/100
• <i>LiteCON</i> : An All-photonic Neuromorphic Accelerator for Energy-efficient Deep Learning ↗

  ACM Transactions on Architecture and Code Optimization · 2022
  not yet assessed
• Upregulation of BMI1-suppressor miRNAs (miR-200c, miR-203) during terminal differentiation of colon epithelial cells ↗

  Journal of Gastroenterology · 2022 · PMID 35244768
  not yet assessed
• Boolean implication analysis of single-cell data predicts retinal cell type markers ↗

  BMC Bioinformatics · 2022 · PMID 36114457
  not yet assessed
• Genome-Wide Association Study of Pregnancy in Childhood Cancer Survivors: A Report from the Childhood Cancer Survivor Study ↗

  Cancer Epidemiology Biomarkers & Prevention · 2022 · PMID 35700038
  not yet assessed
• A Boolean approach for novel hypoxia-related gene discovery ↗

  PLoS ONE · 2022 · PMID 36006949
  not yet assessed
• The DNA glycosylase NEIL2 plays a vital role in combating SARS-CoV-2 infection ↗

  Research Square · 2022 · PMID 35665009
  not yet assessed
• Publisher Correction: An Artificial Intelligence-guided signature reveals the shared host immune response in MIS-C and Kawasaki disease ↗

  Nature Communications · 2022 · PMID 35953486
  not yet assessed
• Transplantation of wild-type hematopoietic stem and progenitor cells rescue Alzheimer’s disease in a mouse model and highlights the central role of microglia in disease pathogenesis ↗

  Research Square · 2022
  not yet assessed
• Artificial Intelligence Guided Discovery of Gastric Cancer Continuum ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2022
  not yet assessed
• AI-assisted Discovery of an Ethnicity-influenced Driver of Cell Transformation in Esophageal and Gastroesophageal Junction Adenocarcinomas ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2022
  not yet assessed
• Machine Learning Identifies Signatures of Macrophage Reactivity and Tolerance that Predict Disease Outcomes ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2022
  not yet assessed
• Phenotypic dissection of epithelial lineages and therapeutic manipulation of differentiation programs in human Adenoid Cystic Carcinomas (ACCs) ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2022
  not yet assessed
• Coupling of NOD2 to GIV is Required for Bacterial Sensing ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2022
  not yet assessed
• LiteCON: An All-Photonic Neuromorphic Accelerator for Energy-efficient Deep Learning (Preprint) ↗

  arXiv (Cornell University) · 2022
  not yet assessed
• NeuCASL: From Logic Design to System Simulation of Neuromorphic Engines ↗

  arXiv (Cornell University) · 2022
  not yet assessed
• Catestatin as a key attenuator of cardiac inflammation in hypertension: Role of macrophage immunosuppression ↗

  Vascular Pharmacology · 2022
  not yet assessed
• RF07 | PSUN384 Hepatocyte Deletion of IGF2 Prevents DNA Damage and Tumor Formation in Hepatocellular Carcinoma ↗

  Journal of the Endocrine Society · 2022
  not yet assessed
• A Prospectively Created Living Organoid Biobank of Crohn’s Disease Patients Enables Integrative Therapeutics ↗

  The Journal of Immunology · 2022
  not yet assessed
• Mishra et al 2022, Supplemental Files ↗

  Zenodo (CERN European Organization for Nuclear Research) · 2022
  not yet assessed
• Mishra et al 2022, Supplemental Files ↗

  Zenodo (CERN European Organization for Nuclear Research) · 2022
  not yet assessed
• Additional file 3 of Boolean implication analysis of single-cell data predicts retinal cell type markers ↗

  Open MIND · 2022
  not yet assessed
• Additional file 2 of Boolean implication analysis of single-cell data predicts retinal cell type markers ↗

  Figshare · 2022
  not yet assessed
• Aged skeletal stem cells generate an inflammatory degenerative niche ↗

  Nature · 2021 · PMID 34381212
  not yet assessed
• Adult stem cell-derived complete lung organoid models emulate lung disease in COVID-19 ↗

  eLife · 2021 · PMID 34463615
  not yet assessed
• Drug repurposing screens identify chemical entities for the development of COVID-19 interventions ↗

  Nature Communications · 2021 · PMID 34083527
  not yet assessed
• Artificial intelligence guided discovery of a barrier-protective therapy in inflammatory bowel disease ↗

  Nature Communications · 2021 · PMID 34253728
  not yet assessed
• E-cigarettes compromise the gut barrier and trigger inflammation ↗

  iScience · 2021 · PMID 33537654
  not yet assessed
• Immunosuppression of Macrophages Underlies the Cardioprotective Effects of CST (Catestatin) ↗

  Hypertension · 2021 · PMID 33826401
  not yet assessed
• AI-guided discovery of the invariant host response to viral pandemics ↗

  EBioMedicine · 2021 · PMID 34127431
  not yet assessed
• A zebrafish model of granulin deficiency reveals essential roles in myeloid cell differentiation ↗

  Blood Advances · 2021 · PMID 33560393
  not yet assessed
• Isolation and characterization of human embryonic stem cell-derived heart field-specific cardiomyocytes unravels new insights into their transcriptional and electrophysiological profiles ↗

  Cardiovascular Research · 2021 · PMID 33744937
  not yet assessed
• BPLight-CNN: A Photonics-Based Backpropagation Accelerator for Deep Learning ↗

  ACM Journal on Emerging Technologies in Computing Systems · 2021
  not yet assessed
• Bladder Cancer Invasion Is Mediated by Mammalian Target of Rapamycin Complex 2–Driven Regulation of Nitric Oxide and Invadopodia Formation ↗

  American Journal Of Pathology · 2021 · PMID 34428425
  not yet assessed
• A long isoform of GIV/Girdin contains a PDZ-binding module that regulates localization and G-protein binding ↗

  Journal of Biological Chemistry · 2021 · PMID 33675748
  not yet assessed
• GIV/Girdin, a non-receptor modulator for Gαi/s, regulates spatiotemporal signaling during sperm capacitation and is required for male fertility ↗

  eLife · 2021 · PMID 34409938
  not yet assessed
• SPT6 loss permits the transdifferentiation of keratinocytes into an intestinal fate that resembles Barrett’s metaplasia ↗

  iScience · 2021 · PMID 34622168
  not yet assessed
• Boolean implication analysis unveils candidate universal relationships in microbiome data ↗

  BMC Bioinformatics · 2021 · PMID 33546590
  not yet assessed
• A Microsatellite in the Coding Sequence of HLA-A/B Is a Mutation Hotspot in Colon Cancer With Microsatellite Instability ↗

  Gastroenterology · 2021 · PMID 34653421
  not yet assessed
• COVID-19 lung disease shares driver AT2 cytopathic features with Idiopathic pulmonary fibrosis ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2021 · PMID 34873597
  not yet assessed
• Artificial Intelligence-rationalized balanced PPARα/γ dual agonism resets the dysregulated macrophage processes in inflammatory bowel disease ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2021
  not yet assessed
• An AI-guided signature reveals the nature of the shared proximal pathways of host immune response in MIS-C and Kawasaki disease ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2021
  not yet assessed
• Author response: Adult stem cell-derived complete lung organoid models emulate lung disease in COVID-19 ↗

  2021
  not yet assessed
• BPLight-CNN: A Photonics-based Backpropagation Accelerator for Deep Learning ↗

  arXiv (Cornell University) · 2021
  not yet assessed
• SPT6 loss Permits the Transdifferentiation of Keratinocytes into an Intestinal Fate that Recapitulates Barrett’s Metaplasia ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2021
  not yet assessed
• GIV/Girdin, a Non-receptor Modulator for Gαi/s, Regulates Spatiotemporal Signaling during Sperm Capacitation and is Required for Male Fertility ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2021
  not yet assessed
• Invariant Differential Expression Analysis Reveals Mechanism of Cancer Resistance to Cell Cycle Inhibitors ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2021
  not yet assessed
• AI-guided use of balanced PPARα/γ dual agonist finetunes macrophage responses in inflammatory bowel disease ↗

  Research Square · 2021
  not yet assessed
• An AI-guided signature reveals the nature of the shared proximal pathways of host immune response in MIS-C and Kawasaki disease. ↗

  PubMed · 2021 · PMID 33880476
  not yet assessed
• Author response: GIV/Girdin, a non-receptor modulator for Gαi/s, regulates spatiotemporal signaling during sperm capacitation and is required for male fertility ↗

  2021
  not yet assessed
• AI-guided use of balanced peroxisome proliferator-activated receptor a/g dual agonist finetunes macrophage responses in inflammatory bowel disease ↗

  The Journal of Immunology · 2021
  not yet assessed
• Additional file 1 of Boolean implication analysis unveils candidate universal relationships in microbiome data ↗

  Figshare · 2021
  not yet assessed
• The PVT1 lncRNA is a novel epigenetic enhancer of MYC, and a promising risk-stratification biomarker in colorectal cancer ↗

  Molecular Cancer · 2020 · PMID 33148262
  not yet assessed
• Enhanced mitochondrial fission suppresses signaling and metastasis in triple-negative breast cancer ↗

  Breast Cancer Research · 2020 · PMID 32503622
  not yet assessed
• Fungal effectors, the double edge sword of phytopathogens ↗

  Current Genetics · 2020 · PMID 33146780
  not yet assessed
• Helicobacter pylori infection downregulates the DNA glycosylase NEIL2, resulting in increased genome damage and inflammation in gastric epithelial cells ↗

  Journal of Biological Chemistry · 2020 · PMID 32518160
  not yet assessed
• The DNA Glycosylase NEIL2 Suppresses Fusobacterium-Infection-Induced Inflammation and DNA Damage in Colonic Epithelial Cells ↗

  Cells · 2020 · PMID 32872214
  not yet assessed
• Computational Approach to Identifying Universal Macrophage Biomarkers ↗

  Frontiers in Physiology · 2020 · PMID 32322218
  not yet assessed
• Transcriptional profiling of lung macrophages identifies a predictive signature for inflammatory lung disease in preterm infants ↗

  Communications Biology · 2020 · PMID 32444859
  not yet assessed
• Upregulation of CD47 Is a Host Checkpoint Response to Pathogen Recognition ↗

  mBio · 2020 · PMID 32576678
  not yet assessed
• The stress polarity signaling (SPS) pathway serves as a marker and a target in the leaky gut barrier: implications in aging and cancer ↗

  Life Science Alliance · 2020 · PMID 32041849
  not yet assessed
• DDX5 promotes oncogene C3 and FABP1 expressions and drives intestinal inflammation and tumorigenesis ↗

  Life Science Alliance · 2020 · PMID 32817263
  not yet assessed
• Haematopoietic stem cell-dependent Notch transcription is mediated by p53 through the Histone chaperone Supt16h ↗

  Nature Cell Biology · 2020 · PMID 33230303
  not yet assessed
• GIV•Kindlin Interaction Is Required for Kindlin-Mediated Integrin Recognition and Activation ↗

  iScience · 2020 · PMID 32535026
  not yet assessed
• Primary Female Urethral Carcinoma ↗

  The American Journal of Surgical Pathology · 2020 · PMID 32868524
  not yet assessed
• MEMTONIC: A Neuromorphic Accelerator for Energy Efficient Deep Learning ↗

  2020
  not yet assessed
• GIV/Girdin and Exo70 Collaboratively Regulate the Mammalian Polarized Exocytic Machinery ↗

  iScience · 2020 · PMID 32590327
  not yet assessed
• Adult Stem Cell-derived Complete Lung Organoid Models Emulate Lung Disease in COVID-19 ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2020 · PMID 33106807
  not yet assessed
• DNA glycosylase NEIL2 prevents <i>Fusobacterium</i> -mediated inflammation and DNA damage in colonic epithelial cells ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2020
  not yet assessed
• AI-guided discovery of the invariant host response to viral pandemics ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2020 · PMID 32995790
  not yet assessed
• Global Age-Specific Patterns of Cyclic Gene Expression Revealed by Tunicate Transcriptome Atlas ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2020
  not yet assessed
• The immunosuppression of macrophages underlies the cardioprotective effects of catestatin (CST) ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2020
  not yet assessed
• E-cigarettes compromise the gut barrier and trigger gut inflammation ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2020
  not yet assessed
• A zebrafish model of Granulin deficiency reveals essential roles in myeloid cell differentiation ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2020
  not yet assessed
• BPhoton-CNN: An Ultrafast Photonic Backpropagation Accelerator for Deep Learning ↗

  2020
  not yet assessed
• Evolution of Modularity, Interactome and Functions of GIV/Girdin (CCDC88A) from Invertebrates to Vertebrates ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2020
  not yet assessed
• Boolean Implication Analysis Improves Prediction Accuracy of In Silico Gene Reporting of Retinal Cell Types ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2020
  not yet assessed
• Boolean Implication Analysis Unveils Candidate Universal Relationships in Microbiome Data ↗

  Research Square · 2020
  not yet assessed
• Boolean Implication Analysis Unveils Candidate Universal Relationships in Microbiome Data ↗

  Research Square · 2020
  not yet assessed
• Computational approach to identifying universal macrophage biomarker ↗

  The Journal of Immunology · 2020
  not yet assessed
• Additional file 1 of The PVT1 lncRNA is a novel epigenetic enhancer of MYC, and a promising risk-stratification biomarker in colorectal cancer ↗

  Open MIND · 2020
  not yet assessed
• Fusobacterium nucleatum promotes colorectal cancer by inducing Wnt/β‐catenin modulator Annexin A1 ↗

  EMBO Reports · 2019 · PMID 30833345
  not yet assessed
• miR-221 Targets QKI to Enhance the Tumorigenic Capacity of Human Colorectal Cancer Stem Cells ↗

  Cancer Research · 2019 · PMID 31416845
  not yet assessed
• High fat diet induces sex-specific differential gene expression in Drosophila melanogaster ↗

  PLoS ONE · 2019 · PMID 30861021
  not yet assessed
• Non-coding and Coding Transcriptional Profiles Are Significantly Altered in Pediatric Retinoblastoma Tumors ↗

  Frontiers in Oncology · 2019 · PMID 31058073
  not yet assessed
• Unbiased Boolean analysis of public gene expression data for cell cycle gene identification ↗

  Molecular Biology of the Cell · 2019 · PMID 31091168
  not yet assessed
• The Gα‐interacting vesicle‐associated protein interacts with and promotes cell surface localization of GRP78 during endoplasmic reticulum stress ↗

  FEBS Letters · 2019 · PMID 31736058
  not yet assessed
• Urothelial Proliferation of Unknown Malignant Potential Involving the Bladder: Histopathologic Features and Risk of Progression in De Novo Cases and Cases With Prior Neoplasia ↗

  Archives of Pathology & Laboratory Medicine · 2019 · PMID 31825667
  not yet assessed
• Comparison and storage study of ultra-filtered clarified jamun (Syzygium cumini) juice ↗

  Journal of Food Science and Technology · 2019 · PMID 30996423
  not yet assessed
• Identification of gene expression logical invariants in <i>Arabidopsis</i> ↗

  Plant Direct · 2019 · PMID 31245766
  not yet assessed
• Identification of histological features to predict MUC2 expression in colon cancer tissues ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2019
  not yet assessed
• NEIL2 plays a critical role in limiting inflammation and preserving genomic integrity in <i>H. pylori</i> -infected gastric epithelial cells ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2019
  not yet assessed
• GIV•Kindlin interaction is required for Kindlin-Mediated Integrin Recognition and Activation ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2019
  not yet assessed
• 1136 – Fusobacterium Nucleatum Initiates Colorectal Cancer by Suppression of the Stress Polarity Pathway ↗

  Gastroenterology · 2019
  not yet assessed
• Computational approach to identifying universal macrophage biomarker ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2019
  not yet assessed
• GIV/Girdin and Exo70 Constitute the Core of the Mammalian Polarized Exocytic Machinery ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2019
  not yet assessed
• Identification of the Human Skeletal Stem Cell ↗

  Cell · 2018 · PMID 30241615
  not yet assessed
• Analysis of cardiomyocyte clonal expansion during mouse heart development and injury ↗

  Nature Communications · 2018 · PMID 29467410
  not yet assessed
• Notch1 regulates the initiation of metastasis and self-renewal of Group 3 medulloblastoma ↗

  Nature Communications · 2018 · PMID 30297829
  not yet assessed
• Convergence of Wnt, growth factor, and heterotrimeric G protein signals on the guanine nucleotide exchange factor Daple ↗

  Science Signaling · 2018 · PMID 29487190
  not yet assessed
• Boolean analysis identifies CD38 as a biomarker of aggressive localized prostate cancer ↗

  Oncotarget · 2018 · PMID 29464091
  not yet assessed
• Publisher Correction: Notch1 regulates the initiation of metastasis and self-renewal of Group 3 medulloblastoma ↗

  Nature Communications · 2018 · PMID 30389946
  not yet assessed
• Abstract 488: Epigenetic regulation of colorectal cancer stem cells by the miR-221/QKI5 axis ↗

  Cancer Research · 2018
  not yet assessed
• Abstract B67: The DLK1-DIO3 imprinted region regulates long-term proliferation in normal and malignant breast epithelium ↗

  Molecular Cancer Research · 2018
  not yet assessed
• Abstract 461: Prospective Isolation of Heart Field Specific Cardiomyocytes from Differentiating Human Embryonic Stem Cells ↗

  Circulation Research · 2018
  not yet assessed
• Convergence of Wnt, Growth Factor and Trimeric G‐protein Signals on the Signaling Scaffold Daple ↗

  The FASEB Journal · 2018
  not yet assessed
• Deep Sequencing of Urinary RNAs for Bladder Cancer Molecular Diagnostics ↗

  Clinical Cancer Research · 2017 · PMID 28193625
  not yet assessed
• Analysis of T1 Bladder Cancer on Biopsy and Transurethral Resection Specimens ↗

  The American Journal of Surgical Pathology · 2017 · PMID 29076872
  not yet assessed
• The innate immune response in fetal lung mesenchymal cells targets VEGFR2 expression and activity ↗

  American Journal of Physiology-Lung Cellular and Molecular Physiology · 2017 · PMID 28336813
  not yet assessed
• High fat diet induces gender‐specific differential gene expression in <i>Drosophila melanogaster brain</i> ↗

  The FASEB Journal · 2017
  not yet assessed
• Convergence of Wnt, Growth Factor and Trimeric G protein signals on Daple ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2017
  not yet assessed
• Abstract 81: E2F4/p107 complex regulates chemotherapy resistance in human colorectal cancer stem cells ↗

  Cancer Research · 2017
  not yet assessed
• Unraveling the RNA world of retinoblastoma ↗

  Canadian Journal of Biotechnology · 2017
  not yet assessed
• CDX2 as a Prognostic Biomarker in Stage II and Stage III Colon Cancer ↗

  New England Journal of Medicine · 2016 · PMID 26789870
  not yet assessed
• Hoxb5 marks long-term haematopoietic stem cells and reveals a homogenous perivascular niche ↗

  Nature · 2016 · PMID 26863982
  not yet assessed
• A Quiescent Bcl11b High Stem Cell Population Is Required for Maintenance of the Mammary Gland ↗

  Cell stem cell · 2016 · PMID 28041896
  not yet assessed
• Identification of tumorigenic cells and therapeutic targets in pancreatic neuroendocrine tumors ↗

  Proceedings of the National Academy of Sciences · 2016 · PMID 27035983
  not yet assessed
• Antibody Therapy Targeting CD47 and CD271 Effectively Suppresses Melanoma Metastasis in Patient-Derived Xenografts ↗

  Cell Reports · 2016 · PMID 27477289
  not yet assessed
• CD13 and ROR2 Permit Isolation of Highly Enriched Cardiac Mesoderm from Differentiating Human Embryonic Stem Cells ↗

  Stem Cell Reports · 2016 · PMID 26771355
  not yet assessed
• Multiple Subsets of Brain Tumor Initiating Cells Coexist in Glioblastoma ↗

  Stem Cells · 2016 · PMID 26991945
  not yet assessed
• MB-16NOTCH1 PROMOTES GROUP 3 MEDULLOBLASTOMA METASTASIS, INITIATION AND SELF-RENEWAL ↗

  Neuro-Oncology · 2016
  not yet assessed
• Identification and Specification of the Mouse Skeletal Stem Cell ↗

  Cell · 2015 · PMID 25594184
  not yet assessed
• CD14-expressing cancer cells establish the inflammatory and proliferative tumor microenvironment in bladder cancer ↗

  Proceedings of the National Academy of Sciences · 2015 · PMID 25825750
  not yet assessed
• OT-08 * DISTINCT BRAIN LINEAGE AND STROMAL GENE EXPRESSION PATTERNS IN WNT, SHH, GROUP 3 AND GROUP 4 MOLECULAR SUBGROUPS OF PEDIATRIC MEDULLOBLASTOMA ↗

  Neuro-Oncology · 2015
  not yet assessed
• Hedgehog Signaling Restrains Bladder Cancer Progression by Eliciting Stromal Production of Urothelial Differentiation Factors ↗

  Cancer Cell · 2014 · PMID 25314078
  not yet assessed
• Endoscopic molecular imaging of human bladder cancer using a CD47 antibody ↗

  Science Translational Medicine · 2014 · PMID 25355698
  not yet assessed
• A cell-intrinsic role for TLR2–MYD88 in intestinal and breast epithelia and oncogenesis ↗

  Nature Cell Biology · 2014 · PMID 25362351
  not yet assessed
• Discriminating cellular heterogeneity using microwell-based RNA cytometry ↗

  Nature Communications · 2014 · PMID 24667995
  not yet assessed
• 398 Loss of Gpsm2 Disrupts Stem Cell Dynamics and Mitotic Spindle Orientation in Normal Colon and Colon Cancer ↗

  Gastroenterology · 2014
  not yet assessed
• The genome sequence of the colonial chordate, Botryllus schlosseri ↗

  eLife · 2013 · PMID 23840927
  not yet assessed
• Clonal precursor of bone, cartilage, and hematopoietic niche stromal cells ↗

  Proceedings of the National Academy of Sciences · 2013 · PMID 23858471
  not yet assessed
• Identification of a Colonial Chordate Histocompatibility Gene ↗

  Science · 2013 · PMID 23888037
  not yet assessed
• Sequential Serum Cytokine Levels of TNF-Alpha, IL-4 and IL-12 are Associated with Prognosis in Plasmodium falciparum Malaria ↗

  Indian Journal of Clinical Biochemistry · 2013 · PMID 24966480
  not yet assessed
• 1281 ENDOSCOPIC MOLECULAR IMAGING OF HUMAN BLADDER CANCER USING A CD47 ANTIBODY ↗

  The Journal of Urology · 2013
  not yet assessed
• Analysis of Human Colon Tissue Cell Composition Using Single-Cell Gene-Expression PCR

  Europe PMC (PubMed Central) · 2013
  not yet assessed
• Correction: Combined Analysis of Murine and Human Microarrays and ChIP Analysis Reveals Genes Associated with the Ability of MYC To Maintain Tumorigenesis ↗

  PLoS Genetics · 2013
  not yet assessed
• The CD47-signal regulatory protein alpha (SIRPa) interaction is a therapeutic target for human solid tumors ↗

  Proceedings of the National Academy of Sciences · 2012 · PMID 22451913
  not yet assessed
• Three differentiation states risk-stratify bladder cancer into distinct subtypes ↗

  Proceedings of the National Academy of Sciences · 2012 · PMID 22308455
  not yet assessed
• Gene Expression Commons: An Open Platform for Absolute Gene Expression Profiling ↗

  PLoS ONE · 2012 · PMID 22815738
  not yet assessed
• Identification and prospective isolation of a mesothelial precursor lineage giving rise to smooth muscle cells and fibroblasts for mammalian internal organs, and their vasculature ↗

  Nature Cell Biology · 2012 · PMID 23143399
  not yet assessed
• Comprehensive Gene Expression Changes Associated with Mouse Postnatal Kidney Development ↗

  The Journal of Urology · 2012 · PMID 23220383
  not yet assessed
• The Power of Boolean Implication Networks ↗

  Frontiers in Physiology · 2012 · PMID 22934030
  not yet assessed
• <i>Drosophila</i> Lin-52 Acts in Opposition to Repressive Components of the Myb-MuvB/dREAM Complex ↗

  Molecular and Cellular Biology · 2012 · PMID 22688510
  not yet assessed
• Systems biology approach to identify markers of differentiation in bladder cancer ↗

  2012
  not yet assessed
• Novel Prostate Cancer Pathway Modeling using Boolean Implication ↗

  2012
  not yet assessed
• Human bone marrow hematopoietic stem cells are increased in frequency and myeloid-biased with age ↗

  Proceedings of the National Academy of Sciences · 2011 · PMID 22123971
  not yet assessed
• Single-cell dissection of transcriptional heterogeneity in human colon tumors ↗

  Nature Biotechnology · 2011 · PMID 22081019
  not yet assessed
• An antibody against SSEA-5 glycan on human pluripotent stem cells enables removal of teratoma-forming cells ↗

  Nature Biotechnology · 2011 · PMID 21841799
  not yet assessed
• Boolean Analysis of Gene Expression Datasets ↗

  2011
  not yet assessed
• Gene Expression Commonsによる造血システムの全体像の解析

  再生医療 · 2011
  not yet assessed
• MicroRNA-125b expands hematopoietic stem cells and enriches for the lymphoid-balanced and lymphoid-biased subsets ↗

  Proceedings of the National Academy of Sciences · 2010 · PMID 21118986
  not yet assessed
• MiDReG: A method of mining developmentally regulated genes using Boolean implications ↗

  Proceedings of the National Academy of Sciences · 2010 · PMID 20231483
  not yet assessed
• Gene Expression Changes Induced by Genistein in the Prostate Cancer Cell Line LNCaP ↗

  The Open Prostate Cancer Journal · 2010
  not yet assessed
• Ganoderic Acid DM: An Alternative Agent for the Treatment of AdvancedProstate Cancer

  The Open Prostate Cancer Journal · 2010
  not yet assessed
• Ly6d marks the earliest stage of B-cell specification and identifies the branchpoint between B-cell and T-cell development ↗

  Genes & Development · 2009 · PMID 19833765
  not yet assessed
• Identification of the branchpoint between B and T cell development through MiDReG (138.17) ↗

  The Journal of Immunology · 2009
  not yet assessed
• Boolean implication networks derived from large scale, whole genome microarray datasets ↗

  Genome biology · 2008 · PMID 18973690
  not yet assessed
• Combined Analysis of Murine and Human Microarrays and ChIP Analysis Reveals Genes Associated with the Ability of MYC To Maintain Tumorigenesis ↗

  PLoS Genetics · 2008 · PMID 18535662
  not yet assessed
• Genomic and Proteomic Analysis Reveals a Threshold Level of MYC Required for Tumor Maintenance ↗

  Cancer Research · 2008 · PMID 18593912
  not yet assessed
• Temporal changes in gene expression induced by sulforaphane in human prostate cancer cells ↗

  The Prostate · 2008 · PMID 18973173
  not yet assessed
• Boolean analysis of high-throughput biological datasets

  2008
  not yet assessed
• Extracting binary signals from microarray time-course data ↗

  Nucleic Acids Research · 2007 · PMID 17517782
  not yet assessed
• On partitioning and symbolic model checking ↗

  IEEE Transactions on Computer-Aided Design of Integrated Circuits and Systems · 2006
  not yet assessed
• Multi-threaded reachability ↗

  2005
  not yet assessed
• Error Detection Using BMC in a Parallel Environment ↗

  Lecture notes in computer science · 2005
  not yet assessed
• A New Reachability Algorithm for Symmetric Multi-processor Architecture ↗

  Lecture notes in computer science · 2005
  not yet assessed
• Predictive Reachability Using a Sample-Based Approach ↗

  Lecture notes in computer science · 2005
  not yet assessed
• Verification of Industrial Designs Using A Computing Grid With More than 100 Nodes ↗

  2005
  not yet assessed
• A Partitioning Methodology for BDD-Based Verification ↗

  Lecture notes in computer science · 2004
  not yet assessed
• Improved Symbolic Verification Using Partitioning Techniques ↗

  Lecture notes in computer science · 2003
  not yet assessed
• Roll Maneuver Control of UCAV Wing Using Anisotropic Piezoelectric Actuators

  Deep Blue (University of Michigan) · 2002
  not yet assessed