Soumita Das

The share of this author’s assessed papers carrying a ⚑ flag. A concentration is a prompt for expert review — never, on its own, a determination about the person.

Collaborators, sized by shared output and coloured by their own reproducibility (green = high, red = low). Click a node to open their card. A pattern is a prompt for review, never a determination.

How this author’s assessed papers reproduced — the outcome of reproduction attempts, not a judgement of the person. Coverage is partial and grows over time.

Assessed papers (2)

• COVID-19 lung disease shares driver AT2 cytopathic features with Idiopathic pulmonary fibrosis.
  2022 L1 85/100
• AI-assisted discovery of an ethnicity-influenced driver of cell transformation in esophageal and gastroesophageal junction adenocarcinomas.
  2022 L1 84/100

2 assessed by us (2 reproduced) · 172 not yet assessed — every PubMed paper on record, linked below.

• A Computational Foundation Toward Targeting the ELMO1/DOCK2 Complex ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2026
  not yet assessed
• PIP4K2C inhibition reverses autophagic flux impairment induced by SARS-CoV-2 ↗

  Nature Communications · 2025 · PMID 40640184
  not yet assessed
• E-cigarettes increase the risk of adenoma formation in murine colorectal cancer model ↗

  Archives of Toxicology · 2025 · PMID 39786590
  not yet assessed
• Proteome profiling indicates a link between mitochondrial pathways and the host-microbial sensor ELMO1 following <i>Salmonella</i> infection ↗

  Gut Microbes · 2025 · PMID 41250600
  not yet assessed
• Imaged Capillary Isoelectric Focusing (icIEF) Platform for Characterization of Charge Variants of Adeno-Associated Virus (AAV) Capsids and Impact on their Transduction Efficiency ↗

  Current Gene Therapy · 2025 · PMID 40237057
  not yet assessed
• Editorial: Infection-mediated inflammation that promotes cancer initiation and/or progression ↗

  Frontiers in Medicine · 2025 · PMID 40007588
  not yet assessed
• PIP4K2C inhibition reverses autophagic flux impairment induced by SARS-CoV-2 ↗

  UNC Libraries · 2025
  not yet assessed
• A living organoid biobank of patients with Crohn’s disease reveals molecular subtypes for personalized therapeutics ↗

  Cell Reports Medicine · 2024 · PMID 39332415
  not yet assessed
• An Update on Blastocystis: Possible Mechanisms of Blastocystis-Mediated Colorectal Cancer ↗

  Microorganisms · 2024 · PMID 39338600
  not yet assessed
• PI3Kγ inhibition circumvents inflammation and vascular leak in SARS-CoV-2 and other infections ↗

  Science Translational Medicine · 2024 · PMID 38959328
  not yet assessed
• Development of an Inflamed High Throughput Stem-cell-based Gut Epithelium Model to Assess the Impact of Annexin A1 ↗

  Stem Cell Reviews and Reports · 2024 · PMID 38498294
  not yet assessed
• Development of Ac2-26 Mesoporous Microparticle System as a Potential Therapeutic Agent for Inflammatory Bowel Diseases ↗

  International Journal of Nanomedicine · 2024 · PMID 38638365
  not yet assessed
• Proteome profiling identifies a link between the mitochondrial pathways and host-microbial sensor ELMO1 following <i>Salmonella</i> infection ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2024 · PMID 38746404
  not yet assessed
• Molecular Signatures for Microbe-Associated Colorectal Cancers ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2024 · PMID 38853996
  not yet assessed
• PIP4K2C inhibition reverses autophagic flux impairment induced by SARS-CoV-2 ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2024 · PMID 38659941
  not yet assessed
• E-cigarettes increase the risk of adenoma formation in murine colorectal cancer model ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2024 · PMID 39253444
  not yet assessed
• Mo1738 THE BIOFLAVONOID HESPERIDIN REDUCES BARRIER DISRUPTION AND INFLAMMATION IN A COCULTURE CELL MODEL OF CROHN'S DISEASE ↗

  Gastroenterology · 2024
  not yet assessed
• Machine learning identifies signatures of macrophage reactivity and tolerance that predict disease outcomes ↗

  EBioMedicine · 2023 · PMID 37516087
  not yet assessed
• Anticancer pan-ErbB inhibitors reduce inflammation and tissue injury and exert broad-spectrum antiviral effects ↗

  Journal of Clinical Investigation · 2023 · PMID 37581931
  not yet assessed
• The DNA glycosylase NEIL2 is protective during SARS-CoV-2 infection ↗

  Nature Communications · 2023 · PMID 38071370
  not yet assessed
• The crosstalk between microbial sensors ELMO1 and NOD2 shape intestinal immune responses ↗

  Virulence · 2023 · PMID 36694274
  not yet assessed
• Catestatin: Antimicrobial Functions and Potential Therapeutics ↗

  Pharmaceutics · 2023 · PMID 37242791
  not yet assessed
• Regulation of DNA damage response by trimeric G-proteins ↗

  iScience · 2023 · PMID 36756378
  not yet assessed
• Isolation of RNA from the Murine Colonic Tissue and qRT-PCR for Inflammatory Cytokines ↗

  BIO-PROTOCOL · 2023 · PMID 36968437
  not yet assessed
• Linking SARS-CoV-2 to the circadian clock ↗

  Nature Cell Biology · 2023 · PMID 36918694
  not yet assessed
• Direct Comparative Analysis of Nature-Inspired Optimization Algorithms on Community Detection Problem in Social Networks ↗

  Lecture notes on data engineering and communications technologies · 2023
  not yet assessed
• Assays with Patient-Derived Organoids to Evaluate the Impact of Microbial Infection on Base Excision Repair (BER) Enzymes ↗

  Methods in molecular biology · 2023 · PMID 37574481
  not yet assessed
• A Living Organoid Biobank of Crohn’s Disease Patients Reveals Molecular Subtypes for Personalized Therapeutics ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2023 · PMID 36993763
  not yet assessed
• 1222 THE INTERPLAY BETWEEN HOST ENDO-LYSOSOMAL AND ENGULFMENT PATHWAY CONTROLS ENTERIC INFECTION AND INFLAMMATORY DISEASES ↗

  Gastroenterology · 2023
  not yet assessed
• The crosstalk between microbial sensors ELMO1 and NOD2 shape intestinal immune responses ↗

  Figshare · 2023
  not yet assessed
• An Artificial Intelligence-guided signature reveals the shared host immune response in MIS-C and Kawasaki disease ↗

  Nature Communications · 2022 · PMID 35577777
  not yet assessed
• Nitrate-dependent regulation of miR444-OsMADS27 signalling cascade controls root development in rice ↗

  Journal of Experimental Botany · 2022 · PMID 35243491
  not yet assessed
• COVID-19 lung disease shares driver AT2 cytopathic features with Idiopathic pulmonary fibrosis

  EBioMedicine · 2022 · PMID 35870428
  L1 85/100
• Role of ELMO1 in inflammation and cancer—clinical implications ↗

  Cellular Oncology · 2022 · PMID 35668246
  not yet assessed
• Artificial intelligence-rationalized balanced PPARα/γ dual agonism resets dysregulated macrophage processes in inflammatory bowel disease ↗

  Communications Biology · 2022 · PMID 35288651
  not yet assessed
• AI-assisted discovery of an ethnicity-influenced driver of cell transformation in esophageal and gastroesophageal junction adenocarcinomas

  JCI Insight · 2022 · PMID 36134663
  L1 84/100
• The DNA glycosylase NEIL2 plays a vital role in combating SARS-CoV-2 infection ↗

  Research Square · 2022 · PMID 35665009
  not yet assessed
• Publisher Correction: An Artificial Intelligence-guided signature reveals the shared host immune response in MIS-C and Kawasaki disease ↗

  Nature Communications · 2022 · PMID 35953486
  not yet assessed
• AI-assisted Discovery of an Ethnicity-influenced Driver of Cell Transformation in Esophageal and Gastroesophageal Junction Adenocarcinomas ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2022
  not yet assessed
• Machine Learning Identifies Signatures of Macrophage Reactivity and Tolerance that Predict Disease Outcomes ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2022
  not yet assessed
• Author response: Effects of mango and mint pod-based e-cigarette aerosol inhalation on inflammatory states of the brain, lung, heart, and colon in mice ↗

  2022
  not yet assessed
• The crosstalk between microbial sensors ELMO1 and NOD2 shape intestinal immune responses ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2022
  not yet assessed
• Towards Direct Comparison of Community Structures in Social Networks ↗

  arXiv (Cornell University) · 2022
  not yet assessed
• Editorial: Microbial sensing to control host immune responses ↗

  Frontiers in Microbiology · 2022 · PMID 36304953
  not yet assessed
• Catestatin as a key attenuator of cardiac inflammation in hypertension: Role of macrophage immunosuppression ↗

  Vascular Pharmacology · 2022
  not yet assessed
• Direct Comparative Analysis of Nature-inspired Optimization Algorithms on Community Detection Problem in Social Networks ↗

  arXiv (Cornell University) · 2022
  not yet assessed
• DCC: A Cascade based Approach to Detect Communities in Social Networks ↗

  arXiv (Cornell University) · 2022
  not yet assessed
• The Ties that matter: From the perspective of Similarity Measure in Online Social Networks ↗

  arXiv (Cornell University) · 2022
  not yet assessed
• A Prospectively Created Living Organoid Biobank of Crohn’s Disease Patients Enables Integrative Therapeutics ↗

  The Journal of Immunology · 2022
  not yet assessed
• Beyond Information Exchange: An Approach to Deploy Network Properties for Information Diffusion ↗

  arXiv (Cornell University) · 2022
  not yet assessed
• Effects of mango and mint pod-based e-cigarette aerosol inhalation on inflammatory states of the brain, lung, heart, and colon in mice ↗

  eLife · 2022 · PMID 35411847
  not yet assessed
• The WxxxE proteins in microbial pathogenesis ↗

  Critical Reviews in Microbiology · 2022 · PMID 35287539
  not yet assessed
• Adult stem cell-derived complete lung organoid models emulate lung disease in COVID-19 ↗

  eLife · 2021 · PMID 34463615
  not yet assessed
• Drug repurposing screens identify chemical entities for the development of COVID-19 interventions ↗

  Nature Communications · 2021 · PMID 34083527
  not yet assessed
• Artificial intelligence guided discovery of a barrier-protective therapy in inflammatory bowel disease ↗

  Nature Communications · 2021 · PMID 34253728
  not yet assessed
• E-cigarettes compromise the gut barrier and trigger inflammation ↗

  iScience · 2021 · PMID 33537654
  not yet assessed
• Immunosuppression of Macrophages Underlies the Cardioprotective Effects of CST (Catestatin) ↗

  Hypertension · 2021 · PMID 33826401
  not yet assessed
• AI-guided discovery of the invariant host response to viral pandemics ↗

  EBioMedicine · 2021 · PMID 34127431
  not yet assessed
• Chromogranin A regulates gut permeability <i>via</i> the antagonistic actions of its proteolytic peptides ↗

  Acta Physiologica · 2021 · PMID 33783968
  not yet assessed
• SPT6 promotes epidermal differentiation and blockade of an intestinal-like phenotype through control of transcriptional elongation ↗

  Nature Communications · 2021 · PMID 33542242
  not yet assessed
• Inflammatory phenotype modulation in the respiratory tract and systemic circulation of e-cigarette users: a pilot study ↗

  American Journal of Physiology-Lung Cellular and Molecular Physiology · 2021 · PMID 34704852
  not yet assessed
• RNA binding protein DDX5 directs tuft cell specification and function to regulate microbial repertoire and disease susceptibility in the intestine ↗

  Gut · 2021 · PMID 34853057
  not yet assessed
• The interaction of enteric bacterial effectors with the host engulfment pathway control innate immune responses ↗

  Gut Microbes · 2021 · PMID 34719317
  not yet assessed
• Functional assays with human patient-derived enteroid monolayers to assess the human gut barrier ↗

  STAR Protocols · 2021 · PMID 34337445
  not yet assessed
• Modeling colorectal cancers using multidimensional organoids ↗

  Advances in cancer research · 2021 · PMID 34148617
  not yet assessed
• Apurinic/Apyrimidinic Endonuclease 1 Restricts the Internalization of Bacteria Into Human Intestinal Epithelial Cells Through the Inhibition of Rac1 ↗

  Frontiers in Immunology · 2021 · PMID 33603730
  not yet assessed
• SPT6 loss permits the transdifferentiation of keratinocytes into an intestinal fate that resembles Barrett’s metaplasia ↗

  iScience · 2021 · PMID 34622168
  not yet assessed
• COVID-19 lung disease shares driver AT2 cytopathic features with Idiopathic pulmonary fibrosis ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2021 · PMID 34873597
  not yet assessed
• Anticancer pan-ErbB inhibitors reduce inflammation and tissue injury and exert broad-spectrum antiviral effects

  2021
  not yet assessed
• The interaction of enteric bacterial effectors with the host engulfment pathway control innate immune responses ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2021
  not yet assessed
• Artificial Intelligence-rationalized balanced PPARα/γ dual agonism resets the dysregulated macrophage processes in inflammatory bowel disease ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2021
  not yet assessed
• Fr587 SALMONELLA BIASES INTESTINAL EPITHELIAL DIFFERENTIATION THROUGH WNT AND NOTCH SIGNALING, THUS POSSIBLY CONTRIBUTING TO ITS DIARRHEAL PATHOGENESIS ↗

  Gastroenterology · 2021
  not yet assessed
• An AI-guided signature reveals the nature of the shared proximal pathways of host immune response in MIS-C and Kawasaki disease ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2021
  not yet assessed
• Author response: Adult stem cell-derived complete lung organoid models emulate lung disease in COVID-19 ↗

  2021
  not yet assessed
• SPT6 loss Permits the Transdifferentiation of Keratinocytes into an Intestinal Fate that Recapitulates Barrett’s Metaplasia ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2021
  not yet assessed
• Regulation of DNA damage response by trimeric G-protein Signaling ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2021
  not yet assessed
• Effect of chronic JUUL aerosol inhalation on inflammatory states of the brain, lung, heart and colon in mice ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2021
  not yet assessed
• AI-guided use of balanced PPARα/γ dual agonist finetunes macrophage responses in inflammatory bowel disease ↗

  Research Square · 2021
  not yet assessed
• An AI-guided signature reveals the nature of the shared proximal pathways of host immune response in MIS-C and Kawasaki disease. ↗

  PubMed · 2021 · PMID 33880476
  not yet assessed
• “Gut in a Dish” Facilitates Drug Development ↗

  Genetic Engineering & Biotechnology News · 2021
  not yet assessed
• Editorial overview: Microbiome ↗

  Current Opinion in Physiology · 2021
  not yet assessed
• AI-guided use of balanced peroxisome proliferator-activated receptor a/g dual agonist finetunes macrophage responses in inflammatory bowel disease ↗

  The Journal of Immunology · 2021
  not yet assessed
• TLR4 signaling and macrophage inflammatory responses are dampened by GIV/Girdin ↗

  Proceedings of the National Academy of Sciences · 2020 · PMID 33055214
  not yet assessed
• Helicobacter pylori infection downregulates the DNA glycosylase NEIL2, resulting in increased genome damage and inflammation in gastric epithelial cells ↗

  Journal of Biological Chemistry · 2020 · PMID 32518160
  not yet assessed
• Host engulfment pathway controls inflammation in inflammatory bowel disease ↗

  FEBS Journal · 2020 · PMID 32003126
  not yet assessed
• The DNA Glycosylase NEIL2 Suppresses Fusobacterium-Infection-Induced Inflammation and DNA Damage in Colonic Epithelial Cells ↗

  Cells · 2020 · PMID 32872214
  not yet assessed
• Computational Approach to Identifying Universal Macrophage Biomarkers ↗

  Frontiers in Physiology · 2020 · PMID 32322218
  not yet assessed
• Loss of function of Oryza sativa Argonaute 18 induces male sterility and reduction in phased small RNAs ↗

  Plant Reproduction · 2020 · PMID 32157461
  not yet assessed
• The stress polarity signaling (SPS) pathway serves as a marker and a target in the leaky gut barrier: implications in aging and cancer ↗

  Life Science Alliance · 2020 · PMID 32041849
  not yet assessed
• Potentiation of calcium‐activated chloride secretion and barrier dysfunction may underlie EGF receptor tyrosine kinase inhibitor‐induced diarrhea ↗

  Physiological Reports · 2020 · PMID 32652816
  not yet assessed
• DDX5 promotes oncogene C3 and FABP1 expressions and drives intestinal inflammation and tumorigenesis ↗

  Life Science Alliance · 2020 · PMID 32817263
  not yet assessed
• Rice-specific Argonaute 17 controls reproductive growth and yield-associated phenotypes ↗

  Plant Molecular Biology · 2020 · PMID 32964370
  not yet assessed
• Congenital Tufting Enteropathy-Associated Mutant of Epithelial Cell Adhesion Molecule Activates the Unfolded Protein Response in a Murine Model of the Disease ↗

  Cells · 2020 · PMID 32290509
  not yet assessed
• Adult Stem Cell-derived Complete Lung Organoid Models Emulate Lung Disease in COVID-19 ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2020 · PMID 33106807
  not yet assessed
• DNA glycosylase NEIL2 prevents <i>Fusobacterium</i> -mediated inflammation and DNA damage in colonic epithelial cells ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2020
  not yet assessed
• AI-guided discovery of the invariant host response to viral pandemics ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2020 · PMID 32995790
  not yet assessed
• The immunosuppression of macrophages underlies the cardioprotective effects of catestatin (CST) ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2020
  not yet assessed
• E-cigarettes compromise the gut barrier and trigger gut inflammation ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2020
  not yet assessed
• TLR4 signaling and macrophage inflammatory responses are dampened by GIV/Girdin ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2020
  not yet assessed
• Chromogranin A regulates gut permeability <i>via</i> the antagonistic actions of its proteolytic peptides ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2020
  not yet assessed
• DDX5 targets tissue-specific RNAs to promote intestine tumorigenesis ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2020
  not yet assessed
• <i>Salmonella</i> biases epithelial differentiation in murine enteroids through Wnt and Notch signaling, which may contribute to diarrheal pathogenesis ↗

  The FASEB Journal · 2020
  not yet assessed
• 736 MUTANT EPCAM MODEL OF CONGENITAL TUFTING ENTEROPATHY SHOWS ABERRANT INTESTINAL EPITHELIAL CELL DIFFERENTIATION ↗

  Gastroenterology · 2020
  not yet assessed
• NEIL2 plays a critical role in limiting inflammation and preserving genomic integrity in H. pylori‐infected gastric epithelial cells ↗

  The FASEB Journal · 2020
  not yet assessed
• Dysregulation of Intestinal Epithelial Cell RIPK Pathways Promotes Chronic Inflammation in the IBD Gut ↗

  Frontiers in Immunology · 2019 · PMID 31164887
  not yet assessed
• RIPK1 Mediates TNF-Induced Intestinal Crypt Apoptosis During Chronic NF-κB Activation ↗

  Cellular and Molecular Gastroenterology and Hepatology · 2019 · PMID 31606566
  not yet assessed
• Enteroids expressing a disease-associated mutant of EpCAM are a model for congenital tufting enteropathy ↗

  American Journal of Physiology-Gastrointestinal and Liver Physiology · 2019 · PMID 31433211
  not yet assessed
• Catestatin Improves Insulin Sensitivity by Promoting M1‐M2 Polarization and Inhibiting Obesity‐Induced Macrophage Infiltration and Gluconeogenesis in Liver ↗

  The FASEB Journal · 2019
  not yet assessed
• NEIL2 plays a critical role in limiting inflammation and preserving genomic integrity in <i>H. pylori</i> -infected gastric epithelial cells ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2019
  not yet assessed
• 372 – Elmo1, a Microbial Sensor, Regulates Bacterial Clearance and Endo-Lysosomal Signaling ↗

  Gastroenterology · 2019
  not yet assessed
• 1136 – Fusobacterium Nucleatum Initiates Colorectal Cancer by Suppression of the Stress Polarity Pathway ↗

  Gastroenterology · 2019
  not yet assessed
• 118 – Activation of the Unfolded Protein Response in the Murine Model of Congenital Tufting Enteropathy ↗

  Gastroenterology · 2019
  not yet assessed
• Computational approach to identifying universal macrophage biomarker ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2019
  not yet assessed
• EpCAM Mutant Enteroids Show Alterations in Differentiation and Permeability ↗

  The FASEB Journal · 2019
  not yet assessed
• Chronic inhalation of e-cigarette vapor containing nicotine disrupts airway barrier function and induces systemic inflammation and multiorgan fibrosis in mice ↗

  American Journal of Physiology-Regulatory, Integrative and Comparative Physiology · 2018 · PMID 29384700
  not yet assessed
• Elevated A20 promotes TNF-induced and RIPK1-dependent intestinal epithelial cell death ↗

  Proceedings of the National Academy of Sciences · 2018 · PMID 30209212
  not yet assessed
• The Role of Ion Transporters in the Pathophysiology of Infectious Diarrhea ↗

  Cellular and Molecular Gastroenterology and Hepatology · 2018 · PMID 29928670
  not yet assessed
• The Pivotal Role of DNA Repair in Infection Mediated-Inflammation and Cancer ↗

  Frontiers in Microbiology · 2018 · PMID 29696001
  not yet assessed
• Neutralization of cholera toxin with nanoparticle decoys for treatment of cholera ↗

  PLoS neglected tropical diseases · 2018 · PMID 29470490
  not yet assessed
• Molecular characterization of a new begomovirus infecting Synedrella nodiflora in South India ↗

  Archives of Virology · 2018 · PMID 29744588
  not yet assessed
• Protective Effects of Human Milk Oligosaccharides on Intestinal Epithelial Function Assessed in Enteroid‐Derived Monolayers ↗

  The FASEB Journal · 2018
  not yet assessed
• Gut Barrier: Innate Immunity ↗

  Elsevier eBooks · 2018
  not yet assessed
• Dysregulation of the engulfment pathway in the gut fuels Inflammatory Bowel Disease ↗

  bioRxiv (Cold Spring Harbor Laboratory) · 2018
  not yet assessed
• 887 - An Enteroid Model of Congenital Tufting Enteropathy Shows Alterations in Intestinal Epithelial Cell Differentiation ↗

  Gastroenterology · 2018
  not yet assessed
• 819 - Dysregulation of the Engulfment Pathway in the Gut Epithelium Fuels Inflammatory Bowel Disease ↗

  Gastroenterology · 2018
  not yet assessed
• 263 - Targeting the Stress Polarity Signaling (SPS)-Pathway Through Amp Activated Kinase: A Novel Strategy to Detect and Fix the Impaired Gut Barrier in IBD ↗

  Gastroenterology · 2018
  not yet assessed
• Elevated A20 promotes TNF-induced and RIPK1-dependent intestinal epithelial cell death

  2018
  not yet assessed
• The ELMO1, a Microbial Sensor Regulates Bacterial Clearance and Endo‐lysosomal Signaling ↗

  The FASEB Journal · 2018
  not yet assessed
• Contributors ↗

  Elsevier eBooks · 2018
  not yet assessed
• ELMO1 Regulates Autophagy Induction and Bacterial Clearance During Enteric Infection ↗

  The Journal of Infectious Diseases · 2017 · PMID 29029244
  not yet assessed
• The host engulfment pathway in enteroids is linked to intestinal inflammation following bacterial infection ↗

  The FASEB Journal · 2017
  not yet assessed
• The Host Engulfment Pathway: A New Cytosolic Sensor of Bacterial Infection and Inflammation ↗

  Gastroenterology · 2017
  not yet assessed
• A Novel Enteroid Model of Congenital Tufting Enteropathy Shows Phenotypic Defects and Alterations in Ultrastructure ↗

  Gastroenterology · 2017
  not yet assessed
• Artificial induction and maintenance of epigenetic variations in plants. ↗

  CABI eBooks · 2017
  not yet assessed
• Reduced Expression of Down‐Regulated in Adenoma (DRA) in Murine Enteroid‐Derived Monolayers Following Infection with <i>Salmonella</i> ↗

  The FASEB Journal · 2017
  not yet assessed
• Electronic cigarette inhalation alters innate immunity and airway cytokines while increasing the virulence of colonizing bacteria ↗

  Journal of Molecular Medicine · 2016 · PMID 26804311
  not yet assessed
• Regulation of Rac1 and Reactive Oxygen Species Production in Response to Infection of Gastrointestinal Epithelia ↗

  PLoS Pathogens · 2016 · PMID 26761793
  not yet assessed
• Mo1921 The Potential Role of ELMO1 in Enteric Bacterial Clearance following Engulfment of Gram-Negative Bacteria ↗

  Gastroenterology · 2016
  not yet assessed
• 973 Human Intestinal Epithelial Host Defense Against Pathogenic Bacterial Infections is Regulated by AP Endonuclease 1 (APE1/Ref-1) ↗

  Gastroenterology · 2016
  not yet assessed
• 5 Regulation of Rac1 and Reactive Oxygen Species Production in Response to Helicobacter pylori Infection of Gastric Epithelium ↗

  Gastroenterology · 2016
  not yet assessed
• Circulating Microparticles Correlate with Severity of Alcoholic Hepatitis, Predict Early Non-Response to Corticosteroid Therapy and Trigger Sterile Inflammation ↗

  Journal of Hepatology · 2016
  not yet assessed
• Chromosome 18q11.2 loss as a predictive marker for response to bevacizumab in metastatic colorectal cancer ↗

  European Journal of Cancer · 2016
  not yet assessed
• Engulfment and Cell Motility Protein 1 (ELMO1) Has an Essential Role in the Internalization of Typhimurium Into Enteric Macrophages That Impact Disease Outcome ↗

  Cellular and Molecular Gastroenterology and Hepatology · 2015 · PMID 26878033
  not yet assessed
• The role of C1q in recognition of apoptotic epithelial cells and inflammatory cytokine production by phagocytes during Helicobacter pylori infection ↗

  Journal of Inflammation · 2015 · PMID 26357509
  not yet assessed
• The Potential Use of a Three Dimensional Cell Culture of Spheroids in the Study of Various Therapeutic Approaches ↗

  MOJ Immunology · 2015
  not yet assessed
• Mo1825 The Interaction of Enteric Bacterial Effectors With Host Engulfment Pathway in Phagocytes Regulates the Pathogenesis of Infection ↗

  Gastroenterology · 2015
  not yet assessed
• Su1830 Immunization Combined With Inhibiting the Anti-Inflammatory Effects of Adenosine Enhances Gastritis and Attenuates Bacterial Load Associated With Persistent Infection by H. pylori ↗

  Gastroenterology · 2015
  not yet assessed
• The Impact of Bacterial Effector Interactions with ELMO1 on Host Mucosal Immune Responses

  17th International Congress of Mucosal Immunology (ICMI 2015) · 2015
  not yet assessed
• Brain angiogenesis inhibitor 1 is expressed by gastric phagocytes during infection with <i>Helicobacter pylori</i> and mediates the recognition and engulfment of human apoptotic gastric epithelial cells ↗

  The FASEB Journal · 2014 · PMID 24509909
  not yet assessed
• The Interaction of Gut Microbiota with Host Immune Responses: Friends or Foes ↗

  MOJ Immunology · 2014
  not yet assessed
• <i>Helicobacter pylori</i> Infection Inhibits Phagocyte Clearance of Apoptotic Gastric Epithelial Cells ↗

  The Journal of Immunology · 2013 · PMID 23686492
  not yet assessed
• C1q promotes recognition and engulfment of <i>H. pylori</i> infected AGS cells and modulates inflammatory cytokine production in macrophages. (P4019) ↗

  The Journal of Immunology · 2013
  not yet assessed
• A Link between the Cytoplasmic Engulfment Protein Elmo1 and the Mediator Complex Subunit Med31 ↗

  Current Biology · 2012 · PMID 23273896
  not yet assessed
• Mo2080 Helicobacter pylori Infection Inhibits Macrophage Clearance of Apoptotic Gastric Epithelial Cells Through Induction of Macrophage Tumor Necrosis Factor-α Secretion ↗

  Gastroenterology · 2012
  not yet assessed
• The recognition and internalization of apoptotic cells and Gram negative bacteria share the BAI1-ELMO1 pathway in the gastrointestinal tract (49.4) ↗

  The Journal of Immunology · 2012
  not yet assessed
• Mo1761 The Potential Role of ELMO1 in the Internalization of Enteric Bacteria ↗

  Gastroenterology · 2012
  not yet assessed
• Apurinic/apyrimidinic endonuclease 1 (APE1) inhibits oxidative stress in gastric epithelial cells during H. pylori infection through binding and inhibition of Rac1 ↗

  The FASEB Journal · 2012
  not yet assessed
• Continued clearance of apoptotic cells critically depends on the phagocyte Ucp2 protein ↗

  Nature · 2011 · PMID 21857682
  not yet assessed
• Brain angiogenesis inhibitor 1 (BAI1) is a pattern recognition receptor that mediates macrophage binding and engulfment of Gram-negative bacteria ↗

  Proceedings of the National Academy of Sciences · 2011 · PMID 21245295
  not yet assessed
• Spontaneous Autoimmune Gastritis, Hypochlorhydria and Bacterial Overgrowth in the Ileitis-Prone, SAMP1/Yit Mice ↗

  Gastroenterology · 2011
  not yet assessed
• Preferential Repair of Oxidized Base Damage in the Transcribed Genes of Mammalian Cells ↗

  Journal of Biological Chemistry · 2010 · PMID 21169365
  not yet assessed
• 651 Apurinic/Apyrimidinic Endonuclease (APE-1) Regulates Oxidative Signaling Pathways Including RAC1 and NADPH Oxidase in H. pylori (HP) Infected Gastric Epithelial Cells (GEC) ↗

  Gastroenterology · 2010
  not yet assessed
• 1017 Recognition of Enteric Bacteria by a New Pattern Recognition Receptor Bai1 (Brain Angiogenesis Inhibitor 1) ↗

  Gastroenterology · 2010
  not yet assessed
• CD73 Is Expressed by Human Regulatory T Helper Cells and Suppresses Proinflammatory Cytokine Production and<i>Helicobacter felis</i>–Induced Gastritis in Mice ↗

  The Journal of Infectious Diseases · 2009 · PMID 19281303
  not yet assessed
• Regulatory Role of Human AP-Endonuclease (APE1/Ref-1) in YB-1-Mediated Activation of the Multidrug Resistance Gene <i>MDR1</i> ↗

  Molecular and Cellular Biology · 2008 · PMID 18809583
  not yet assessed
• Stimulation of NEIL2-mediated Oxidized Base Excision Repair via YB-1 Interaction during Oxidative Stress ↗

  Journal of Biological Chemistry · 2007 · PMID 17686777
  not yet assessed
• Expression of the Programmed Death Ligand 1, B7-H1, on Gastric Epithelial Cells after<i>Helicobacter pylori</i>Exposure Promotes Development of CD4⁺CD25⁺FoxP3⁺Regulatory T Cells ↗

  Infection and Immunity · 2007 · PMID 17562772
  not yet assessed
• Community-level micronutrient fortification of a food supplement in India: a controlled trial in preschool children aged 36–66 mo ↗

  American Journal of Clinical Nutrition · 2007 · PMID 17413115
  not yet assessed
• B7-H1 Expression on Gastric Epithelial Cells Induces Development of T Regulatory Cells during Helicobacter pylori Infection (43.52) ↗

  The Journal of Immunology · 2007
  not yet assessed
• Expression of B7-H1 on Gastric Epithelial Cells: Its Potential Role in Regulating T Cells during <i>Helicobacter pylori</i> Infection ↗

  The Journal of Immunology · 2006 · PMID 16493058
  not yet assessed
• <i>Helicobacter pylori</i> -Induced IL-8 Production by Gastric Epithelial Cells Up-Regulates CD74 Expression ↗

  The Journal of Immunology · 2005 · PMID 15972644
  not yet assessed
• Differential Protein Expression Profiles of Gastric Epithelial Cells Following <i>Helicobacter </i><i>p</i><i>ylori </i>Infection Using ProteinChips ↗

  Journal of Proteome Research · 2005 · PMID 15952739
  not yet assessed
• Use of RNA Arbitrarily Primed-PCR Fingerprinting To Identify <i>Vibrio cholerae</i> Genes Differentially Expressed in the Host following Infection ↗

  Infection and Immunity · 2000 · PMID 10858198
  not yet assessed
• Giardia lamblia: Absence of Cyst Antigens and Reduced Secretory Vesicle Formation and Bile Salt Uptake in an Encystation-Deficient Subline ↗

  Experimental Parasitology · 1993 · PMID 7504633
  not yet assessed